RNA–Protein interactions for RNA: ENST00000467824.1

SYN3-209, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-209ENST00000467824 SLC27A3Q5K4L6 730 aa13.41□□□□□ -0.26
SYN3-209ENST00000467824 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
SYN3-209ENST00000467824 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
SYN3-209ENST00000467824 USHBP1Q8N6Y0 703 aa13.4□□□□□ -0.26
SYN3-209ENST00000467824 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
SYN3-209ENST00000467824 HSPA5P11021 654 aaKnown RBP13.39□□□□□ -0.27
SYN3-209ENST00000467824 YY1P25490 414 aa13.39□□□□□ -0.27
SYN3-209ENST00000467824 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
SYN3-209ENST00000467824 PDGFDQ9GZP0 370 aaPredicted RBP13.39□□□□□ -0.27
SYN3-209ENST00000467824 EMILIN1Q9Y6C2 1016 aa13.39□□□□□ -0.27
SYN3-209ENST00000467824 PCDH11XQ9BZA7 1347 aa13.39□□□□□ -0.27
SYN3-209ENST00000467824 PCDH11YQ9BZA8 1340 aa13.39□□□□□ -0.27
SYN3-209ENST00000467824 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
SYN3-209ENST00000467824 ZBTB7AO95365 584 aa13.38□□□□□ -0.27
SYN3-209ENST00000467824 MTFR1LQ9H019 292 aa13.38□□□□□ -0.27
SYN3-209ENST00000467824 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
SYN3-209ENST00000467824 BTAF1O14981 1849 aa13.36□□□□□ -0.27
SYN3-209ENST00000467824 LRRC4BQ9NT99 713 aa13.36□□□□□ -0.27
SYN3-209ENST00000467824 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
SYN3-209ENST00000467824 NSD2O96028 1365 aa13.35□□□□□ -0.27
SYN3-209ENST00000467824 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
SYN3-209ENST00000467824 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
SYN3-209ENST00000467824 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
SYN3-209ENST00000467824 PTGER2P43116 358 aa13.34□□□□□ -0.27
SYN3-209ENST00000467824 ZNF827Q17R98 1081 aa13.34□□□□□ -0.27
SYN3-209ENST00000467824 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
SYN3-209ENST00000467824 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
SYN3-209ENST00000467824 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
SYN3-209ENST00000467824 PANK3Q9H999 370 aa13.33□□□□□ -0.28
SYN3-209ENST00000467824 TFCP2L1Q9NZI6 479 aa13.33□□□□□ -0.28
SYN3-209ENST00000467824 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
SYN3-209ENST00000467824 DOT1LQ8TEK3 1739 aa13.33□□□□□ -0.28
SYN3-209ENST00000467824 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
SYN3-209ENST00000467824 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
SYN3-209ENST00000467824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYN3-209ENST00000467824 RGPD2P0DJD1 1756 aa13.32□□□□□ -0.28
SYN3-209ENST00000467824 SHANK3Q9BYB0 1731 aa13.31□□□□□ -0.28
SYN3-209ENST00000467824 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
SYN3-209ENST00000467824 CYP27B1O15528 508 aa13.31□□□□□ -0.28
SYN3-209ENST00000467824 EYA1Q99502 592 aa13.31□□□□□ -0.28
SYN3-209ENST00000467824 PLEKHG2Q9H7P9 1386 aa13.31□□□□□ -0.28
SYN3-209ENST00000467824 MPRIPQ6WCQ1 1025 aa13.3□□□□□ -0.28
SYN3-209ENST00000467824 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
SYN3-209ENST00000467824 ARXQ96QS3 562 aa13.3□□□□□ -0.28
SYN3-209ENST00000467824 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
SYN3-209ENST00000467824 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
SYN3-209ENST00000467824 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
SYN3-209ENST00000467824 POLD1P28340 1107 aa13.29□□□□□ -0.28
SYN3-209ENST00000467824 KCNQ4P56696 695 aa13.29□□□□□ -0.28
SYN3-209ENST00000467824 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
SYN3-209ENST00000467824 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
SYN3-209ENST00000467824 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
SYN3-209ENST00000467824 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
SYN3-209ENST00000467824 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
SYN3-209ENST00000467824 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
SYN3-209ENST00000467824 UTRNP46939 3433 aa13.28□□□□□ -0.28
SYN3-209ENST00000467824 IFNL2Q8IZJ0 200 aa13.27□□□□□ -0.29
SYN3-209ENST00000467824 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
SYN3-209ENST00000467824 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.29
SYN3-209ENST00000467824 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
SYN3-209ENST00000467824 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.29
SYN3-209ENST00000467824 LY75O60449 1722 aa13.26□□□□□ -0.29
SYN3-209ENST00000467824 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
SYN3-209ENST00000467824 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
SYN3-209ENST00000467824 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
SYN3-209ENST00000467824 MSH5O43196 834 aa13.25□□□□□ -0.29
SYN3-209ENST00000467824 PHKG2P15735 406 aa13.25□□□□□ -0.29
SYN3-209ENST00000467824 PIGBQ92521 554 aa13.25□□□□□ -0.29
SYN3-209ENST00000467824 TUBGCP6Q96RT7 1819 aa13.25□□□□□ -0.29
SYN3-209ENST00000467824 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
SYN3-209ENST00000467824 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
SYN3-209ENST00000467824 MAP2P11137 1827 aaKnown RBP13.23□□□□□ -0.29
SYN3-209ENST00000467824 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
SYN3-209ENST00000467824 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
SYN3-209ENST00000467824 AK7Q96M32 723 aa13.23□□□□□ -0.29
SYN3-209ENST00000467824 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
SYN3-209ENST00000467824 COL23A1Q86Y22 540 aaPredicted RBP13.22□□□□□ -0.29
SYN3-209ENST00000467824 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
SYN3-209ENST00000467824 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
SYN3-209ENST00000467824 CHD4Q14839 1912 aa13.21□□□□□ -0.29
SYN3-209ENST00000467824 LOC102724428A0A0B4J2F2 783 aa13.21□□□□□ -0.29
SYN3-209ENST00000467824 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
SYN3-209ENST00000467824 SIK1P57059 783 aa13.21□□□□□ -0.29
SYN3-209ENST00000467824 TOGARAM1Q9Y4F4 1720 aa13.21□□□□□ -0.3
SYN3-209ENST00000467824 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.3
SYN3-209ENST00000467824 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
SYN3-209ENST00000467824 ZNF530Q6P9A1 599 aaPredicted RBP13.2□□□□□ -0.3
SYN3-209ENST00000467824 C5P01031 1676 aa13.19□□□□□ -0.3
SYN3-209ENST00000467824 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
SYN3-209ENST00000467824 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
SYN3-209ENST00000467824 SSFA2P28290 1259 aa13.18□□□□□ -0.3
SYN3-209ENST00000467824 IL13P35225 146 aa13.18□□□□□ -0.3
SYN3-209ENST00000467824 GPR162Q16538 588 aa13.18□□□□□ -0.3
SYN3-209ENST00000467824 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
SYN3-209ENST00000467824 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
SYN3-209ENST00000467824 KDRP35968 1356 aa13.18□□□□□ -0.3
SYN3-209ENST00000467824 C4BP0C0L5 1744 aa13.17□□□□□ -0.3
SYN3-209ENST00000467824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
SYN3-209ENST00000467824 PHF14O94880 888 aa13.17□□□□□ -0.3
SYN3-209ENST00000467824 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms