RNA–Protein interactions for RNA: ENST00000467472.1

SIMC1-206, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 5

Gene SIMC1, Length 364 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-206ENST00000467472 HOXC9P31274 260 aa32.59■■■□□ 2.81
SIMC1-206ENST00000467472 PRIM1P49642 420 aaKnown RBP32.59■■■□□ 2.81
SIMC1-206ENST00000467472 MEGF6O75095 1541 aa32.58■■■□□ 2.81
SIMC1-206ENST00000467472 GPR162Q16538 588 aa32.58■■■□□ 2.81
SIMC1-206ENST00000467472 COG3Q96JB2 828 aa32.58■■■□□ 2.81
SIMC1-206ENST00000467472 SYTL4Q96C24 671 aaPredicted RBP32.57■■■□□ 2.8
SIMC1-206ENST00000467472 TESK2Q96S53 571 aa32.57■■■□□ 2.8
SIMC1-206ENST00000467472 TFCP2L1Q9NZI6 479 aa32.57■■■□□ 2.8
SIMC1-206ENST00000467472 TONSLQ96HA7 1378 aa32.56■■■□□ 2.8
SIMC1-206ENST00000467472 C1QTNF8P60827 252 aa32.55■■■□□ 2.8
SIMC1-206ENST00000467472 ZCRB1Q8TBF4 217 aaKnown RBP32.55■■■□□ 2.8
SIMC1-206ENST00000467472 RTL1A6NKG5 1358 aa32.55■■■□□ 2.8
SIMC1-206ENST00000467472 CLSPNQ9HAW4 1339 aa32.54■■■□□ 2.8
SIMC1-206ENST00000467472 KCNQ4P56696 695 aa32.54■■■□□ 2.8
SIMC1-206ENST00000467472 AMPHP49418 695 aa32.53■■■□□ 2.8
SIMC1-206ENST00000467472 TAF1LQ8IZX4 1826 aa32.53■■■□□ 2.8
SIMC1-206ENST00000467472 C5P01031 1676 aa32.53■■■□□ 2.8
SIMC1-206ENST00000467472 KLHL34Q8N239 644 aa32.52■■■□□ 2.8
SIMC1-206ENST00000467472 FBLN1P23142 703 aa32.51■■■□□ 2.79
SIMC1-206ENST00000467472 SLC24A1O60721 1099 aa32.5■■■□□ 2.79
SIMC1-206ENST00000467472 CGNL1Q0VF96 1302 aa32.49■■■□□ 2.79
SIMC1-206ENST00000467472 SENP3-EIF4A1A0A087X0R7 540 aa32.48■■■□□ 2.79
SIMC1-206ENST00000467472 ST20-MTHFSA0A0A6YYL1 179 aa32.48■■■□□ 2.79
SIMC1-206ENST00000467472 CCNL1Q9UK58 526 aaPredicted RBP32.48■■■□□ 2.79
SIMC1-206ENST00000467472 KIF20BQ96Q89 1820 aa32.48■■■□□ 2.79
SIMC1-206ENST00000467472 NLGN2Q8NFZ4 835 aa32.47■■■□□ 2.79
SIMC1-206ENST00000467472 USP47Q96K76 1375 aa32.46■■■□□ 2.79
SIMC1-206ENST00000467472 NBPF6Q5VWK0 638 aa32.45■■■□□ 2.79
SIMC1-206ENST00000467472 NBPF4Q96M43 638 aa32.45■■■□□ 2.79
SIMC1-206ENST00000467472 ITGB4P16144 1822 aa32.44■■■□□ 2.78
SIMC1-206ENST00000467472 PELP1Q8IZL8 1130 aaKnown RBP32.43■■■□□ 2.78
SIMC1-206ENST00000467472 SMG6Q86US8 1419 aaKnown RBP32.43■■■□□ 2.78
SIMC1-206ENST00000467472 COL23A1Q86Y22 540 aaPredicted RBP32.42■■■□□ 2.78
SIMC1-206ENST00000467472 RRS1Q15050 365 aaKnown RBP32.41■■■□□ 2.78
SIMC1-206ENST00000467472 FYB1O15117 783 aa32.4■■■□□ 2.78
SIMC1-206ENST00000467472 TOGARAM1Q9Y4F4 1720 aa32.4■■■□□ 2.78
SIMC1-206ENST00000467472 GIGYF1O75420 1035 aaPredicted RBP32.39■■■□□ 2.78
SIMC1-206ENST00000467472 RAPGEF4Q8WZA2 1011 aa32.39■■■□□ 2.78
SIMC1-206ENST00000467472 PKD1L3Q7Z443 1732 aa32.38■■■□□ 2.77
SIMC1-206ENST00000467472 USHBP1Q8N6Y0 703 aa32.38■■■□□ 2.77
SIMC1-206ENST00000467472 GRIN3BO60391 1043 aa32.37■■■□□ 2.77
SIMC1-206ENST00000467472 INSRP06213 1382 aa32.36■■■□□ 2.77
SIMC1-206ENST00000467472 MSH5O43196 834 aa32.36■■■□□ 2.77
SIMC1-206ENST00000467472 YBX3P16989 372 aaKnown RBP eCLIP32.36■■■□□ 2.775e-6■■□□□ 13.3
SIMC1-206ENST00000467472 GGNBP2Q9H3C7 697 aa32.36■■■□□ 2.77
SIMC1-206ENST00000467472 UBR3Q6ZT12 1888 aa32.35■■■□□ 2.77
SIMC1-206ENST00000467472 KIF24Q5T7B8 1368 aa32.35■■■□□ 2.77
SIMC1-206ENST00000467472 PCDH11XQ9BZA7 1347 aa32.35■■■□□ 2.77
SIMC1-206ENST00000467472 PCDH11YQ9BZA8 1340 aa32.35■■■□□ 2.77
SIMC1-206ENST00000467472 TATP17735 454 aaPredicted RBP32.35■■■□□ 2.77
SIMC1-206ENST00000467472 HMGB2P26583 209 aaKnown RBP32.35■■■□□ 2.77
SIMC1-206ENST00000467472 C4BP0C0L5 1744 aa32.34■■■□□ 2.77
SIMC1-206ENST00000467472 CEP350Q5VT06 3117 aa32.33■■■□□ 2.77
SIMC1-206ENST00000467472 FLT4P35916 1363 aa32.32■■■□□ 2.77
SIMC1-206ENST00000467472 HSP90AB2PQ58FF8 381 aa32.31■■■□□ 2.76
SIMC1-206ENST00000467472 FLAD1Q8NFF5 587 aa32.31■■■□□ 2.76
SIMC1-206ENST00000467472 PALLDQ8WX93 1383 aa32.31■■■□□ 2.76
SIMC1-206ENST00000467472 TMF1P82094 1093 aa32.3■■■□□ 2.76
SIMC1-206ENST00000467472 MSL1Q68DK7 614 aa32.3■■■□□ 2.76
SIMC1-206ENST00000467472 ANKRD26Q9UPS8 1709 aa32.3■■■□□ 2.76
SIMC1-206ENST00000467472 MAP2P11137 1827 aaKnown RBP32.3■■■□□ 2.76
SIMC1-206ENST00000467472 CD2APQ9Y5K6 639 aa32.28■■■□□ 2.76
SIMC1-206ENST00000467472 CCER1Q8TC90 406 aaPredicted RBP32.27■■■□□ 2.76
SIMC1-206ENST00000467472 CYP27B1O15528 508 aa32.26■■■□□ 2.75
SIMC1-206ENST00000467472 NCAPD2Q15021 1401 aa32.26■■■□□ 2.75
SIMC1-206ENST00000467472 MPRIPQ6WCQ1 1025 aa32.25■■■□□ 2.75
SIMC1-206ENST00000467472 TIMELESSQ9UNS1 1208 aa32.23■■■□□ 2.75
SIMC1-206ENST00000467472 SMARCC1Q92922 1105 aaPredicted RBP32.22■■■□□ 2.75
SIMC1-206ENST00000467472 ATP10DQ9P241 1426 aa32.22■■■□□ 2.75
SIMC1-206ENST00000467472 NSD3Q9BZ95 1437 aa32.19■■■□□ 2.74
SIMC1-206ENST00000467472 CDCA8Q53HL2 280 aa32.19■■■□□ 2.74
SIMC1-206ENST00000467472 ADCY9O60503 1353 aa32.18■■■□□ 2.74
SIMC1-206ENST00000467472 NKX1-1Q15270 411 aaPredicted RBP32.17■■■□□ 2.74
SIMC1-206ENST00000467472 AK7Q96M32 723 aa32.17■■■□□ 2.74
SIMC1-206ENST00000467472 AMIGO3Q86WK7 504 aa32.16■■■□□ 2.74
SIMC1-206ENST00000467472 PIGBQ92521 554 aa32.15■■■□□ 2.74
SIMC1-206ENST00000467472 EMILIN1Q9Y6C2 1016 aa32.15■■■□□ 2.74
SIMC1-206ENST00000467472 CARD14Q9BXL6 1004 aa32.14■■■□□ 2.74
SIMC1-206ENST00000467472 KIF13BQ9NQT8 1826 aa32.12■■■□□ 2.73
SIMC1-206ENST00000467472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.11■■■□□ 2.73
SIMC1-206ENST00000467472 SPG7Q9UQ90 795 aa32.11■■■□□ 2.73
SIMC1-206ENST00000467472 SSFA2P28290 1259 aa32.1■■■□□ 2.73
SIMC1-206ENST00000467472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.09■■■□□ 2.73
SIMC1-206ENST00000467472 WASHC2AQ641Q2 1341 aa32.08■■■□□ 2.73
SIMC1-206ENST00000467472 IGSF1Q8N6C5 1336 aa32.08■■■□□ 2.73
SIMC1-206ENST00000467472 LOC102724428A0A0B4J2F2 783 aa32.08■■■□□ 2.73
SIMC1-206ENST00000467472 PHF14O94880 888 aa32.08■■■□□ 2.73
SIMC1-206ENST00000467472 SIK1P57059 783 aa32.08■■■□□ 2.73
SIMC1-206ENST00000467472 GPBP1L1Q9HC44 474 aaPredicted RBP32.08■■■□□ 2.73
SIMC1-206ENST00000467472 LINC00116Q8NCU8 138 aa32.07■■■□□ 2.72
SIMC1-206ENST00000467472 ZNF831Q5JPB2 1677 aa32.07■■■□□ 2.72
SIMC1-206ENST00000467472 SMIM5Q71RC9 77 aa32.06■■■□□ 2.72
SIMC1-206ENST00000467472 CICQ96RK0 1608 aaPredicted RBP32.06■■■□□ 2.72
SIMC1-206ENST00000467472 KIAA1551Q9HCM1 1747 aa32.06■■■□□ 2.72
SIMC1-206ENST00000467472 EYA1Q99502 592 aa32.04■■■□□ 2.72
SIMC1-206ENST00000467472 TMOD3Q9NYL9 352 aa32.04■■■□□ 2.72
SIMC1-206ENST00000467472 PPM1GO15355 546 aaPredicted RBP32.02■■■□□ 2.72
SIMC1-206ENST00000467472 PLEKHG2Q9H7P9 1386 aa32.02■■■□□ 2.72
SIMC1-206ENST00000467472 ITPK1Q13572 414 aa32.01■■■□□ 2.71
SIMC1-206ENST00000467472 ASAP1Q9ULH1 1129 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms