RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 EPB41L2O43491 1005 aaKnown RBP19.07■□□□□ 0.64
CHD1L-205ENST00000467213 ZDHHC9Q9Y397 364 aa19.07■□□□□ 0.64
CHD1L-205ENST00000467213 RGS12O14924 1447 aa19.07■□□□□ 0.64
CHD1L-205ENST00000467213 IL13P35225 146 aa19.06■□□□□ 0.64
CHD1L-205ENST00000467213 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
CHD1L-205ENST00000467213 C1orf115Q9H7X2 142 aa19.06■□□□□ 0.64
CHD1L-205ENST00000467213 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
CHD1L-205ENST00000467213 EDC4Q6P2E9 1401 aaKnown RBP19.06■□□□□ 0.64
CHD1L-205ENST00000467213 INTS4Q96HW7 963 aaKnown RBP19.05■□□□□ 0.64
CHD1L-205ENST00000467213 PTPRCP08575 1304 aa19.05■□□□□ 0.64
CHD1L-205ENST00000467213 CUL4AQ13619 759 aa19.04■□□□□ 0.64
CHD1L-205ENST00000467213 SASS6Q6UVJ0 657 aa19.04■□□□□ 0.64
CHD1L-205ENST00000467213 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
CHD1L-205ENST00000467213 SSH2Q76I76 1423 aa19.04■□□□□ 0.64
CHD1L-205ENST00000467213 ERC2O15083 957 aa19.04■□□□□ 0.64
CHD1L-205ENST00000467213 PHACTR3Q96KR7 559 aa19.04■□□□□ 0.64
CHD1L-205ENST00000467213 SDSP20132 328 aa19.03■□□□□ 0.64
CHD1L-205ENST00000467213 ANAPC15P60006 121 aa19.03■□□□□ 0.64
CHD1L-205ENST00000467213 UVSSAQ2YD98 709 aa19.03■□□□□ 0.64
CHD1L-205ENST00000467213 GGT6Q6P531 493 aa19.03■□□□□ 0.64
CHD1L-205ENST00000467213 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
CHD1L-205ENST00000467213 SETD1AO15047 1707 aaKnown RBP19.02■□□□□ 0.64
CHD1L-205ENST00000467213 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.64
CHD1L-205ENST00000467213 BRD1O95696 1058 aa19.02■□□□□ 0.63
CHD1L-205ENST00000467213 CEP85Q6P2H3 762 aa19.02■□□□□ 0.63
CHD1L-205ENST00000467213 PRAM1Q96QH2 718 aa19.02■□□□□ 0.63
CHD1L-205ENST00000467213 R3HCC1Q9Y3T6 440 aaKnown RBP19.02■□□□□ 0.63
CHD1L-205ENST00000467213 RTL1A6NKG5 1358 aa19.01■□□□□ 0.63
CHD1L-205ENST00000467213 IDI1Q13907 227 aa19.01■□□□□ 0.63
CHD1L-205ENST00000467213 FAM184AQ8NB25 1140 aa19.01■□□□□ 0.63
CHD1L-205ENST00000467213 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
CHD1L-205ENST00000467213 TMEM63CQ9P1W3 806 aa19.01■□□□□ 0.63
CHD1L-205ENST00000467213 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
CHD1L-205ENST00000467213 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
CHD1L-205ENST00000467213 UQCRHLA0A096LP55 91 aa19■□□□□ 0.63
CHD1L-205ENST00000467213 PHF14O94880 888 aa19■□□□□ 0.63
CHD1L-205ENST00000467213 UQCRHP07919 91 aa19■□□□□ 0.63
CHD1L-205ENST00000467213 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
CHD1L-205ENST00000467213 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
CHD1L-205ENST00000467213 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
CHD1L-205ENST00000467213 NCLP19338 710 aaKnown RBP18.99■□□□□ 0.63
CHD1L-205ENST00000467213 PKP1Q13835 747 aa18.99■□□□□ 0.63
CHD1L-205ENST00000467213 AKAP12Q02952 1782 aa18.99■□□□□ 0.63
CHD1L-205ENST00000467213 N4BP2Q86UW6 1770 aaPredicted RBP18.99■□□□□ 0.63
CHD1L-205ENST00000467213 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
CHD1L-205ENST00000467213 CABP1Q9NZU7 370 aa18.98■□□□□ 0.63
CHD1L-205ENST00000467213 C3P01024 1663 aa18.98■□□□□ 0.63
CHD1L-205ENST00000467213 HMMRO75330 724 aa18.98■□□□□ 0.63
CHD1L-205ENST00000467213 ZGPATQ8N5A5 531 aaKnown RBP18.98■□□□□ 0.63
CHD1L-205ENST00000467213 RICTORQ6R327 1708 aa18.97■□□□□ 0.63
CHD1L-205ENST00000467213 PRIMPOLQ96LW4 560 aa18.97■□□□□ 0.63
CHD1L-205ENST00000467213 TMEM87AQ8NBN3 555 aa18.96■□□□□ 0.63
CHD1L-205ENST00000467213 TSPY26PQ9H489 355 aa18.96■□□□□ 0.63
CHD1L-205ENST00000467213 ARHGEF10O15013 1369 aa18.96■□□□□ 0.63
CHD1L-205ENST00000467213 GTF2F1P35269 517 aaKnown RBP eCLIP18.96■□□□□ 0.63
CHD1L-205ENST00000467213 XPCQ01831 940 aaPredicted RBP18.95■□□□□ 0.62
CHD1L-205ENST00000467213 TMX3Q96JJ7 454 aa18.95■□□□□ 0.62
CHD1L-205ENST00000467213 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
CHD1L-205ENST00000467213 SALL3Q9BXA9 1300 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 SYCE3A1L190 88 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 CHL1O00533 1208 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 HMGN5P82970 282 aaKnown RBP18.94■□□□□ 0.62
CHD1L-205ENST00000467213 KIAA2012Q0VF49 1180 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 LETM1O95202 739 aaPredicted RBP18.94■□□□□ 0.62
CHD1L-205ENST00000467213 MCCP23508 829 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHD1L-205ENST00000467213 C16orf71Q8IYS4 520 aaPredicted RBP18.94■□□□□ 0.62
CHD1L-205ENST00000467213 STK26Q9P289 416 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
CHD1L-205ENST00000467213 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
CHD1L-205ENST00000467213 MYRIPQ8NFW9 859 aa18.93■□□□□ 0.62
CHD1L-205ENST00000467213 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
CHD1L-205ENST00000467213 ITSN1Q15811 1721 aa18.93■□□□□ 0.62
CHD1L-205ENST00000467213 MSH6P52701 1360 aa18.92■□□□□ 0.62
CHD1L-205ENST00000467213 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
CHD1L-205ENST00000467213 AOX1Q06278 1338 aa18.92■□□□□ 0.62
CHD1L-205ENST00000467213 HMOX1P09601 288 aa18.92■□□□□ 0.62
CHD1L-205ENST00000467213 PDE1AP54750 535 aa18.92■□□□□ 0.62
CHD1L-205ENST00000467213 CACNA1FO60840 1977 aa18.91■□□□□ 0.62
CHD1L-205ENST00000467213 FAM13BQ9NYF5 915 aa18.91■□□□□ 0.62
CHD1L-205ENST00000467213 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
CHD1L-205ENST00000467213 UTP14CQ5TAP6 766 aaKnown RBP18.9■□□□□ 0.62
CHD1L-205ENST00000467213 PIBF1Q8WXW3 757 aa18.9■□□□□ 0.62
CHD1L-205ENST00000467213 ESYT1Q9BSJ8 1104 aa18.9■□□□□ 0.62
CHD1L-205ENST00000467213 OTUD7AQ8TE49 926 aaPredicted RBP18.9■□□□□ 0.62
CHD1L-205ENST00000467213 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.62
CHD1L-205ENST00000467213 RBM10P98175 930 aaKnown RBP18.89■□□□□ 0.62
CHD1L-205ENST00000467213 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.62
CHD1L-205ENST00000467213 SRCIN1Q9C0H9 1055 aa18.89■□□□□ 0.62
CHD1L-205ENST00000467213 SIRT1Q96EB6 747 aa18.89■□□□□ 0.61
CHD1L-205ENST00000467213 CCDC94Q9BW85 323 aaPredicted RBP18.89■□□□□ 0.61
CHD1L-205ENST00000467213 NSFL1CQ9UNZ2 370 aaKnown RBP18.89■□□□□ 0.61
CHD1L-205ENST00000467213 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
CHD1L-205ENST00000467213 NEK4P51957 841 aa18.88■□□□□ 0.61
CHD1L-205ENST00000467213 SPTLC3Q9NUV7 552 aa18.88■□□□□ 0.61
CHD1L-205ENST00000467213 STAP2Q9UGK3 403 aa18.88■□□□□ 0.61
CHD1L-205ENST00000467213 ELL2O00472 640 aaPredicted RBP18.88■□□□□ 0.61
CHD1L-205ENST00000467213 NALCNQ8IZF0 1738 aa18.88■□□□□ 0.61
CHD1L-205ENST00000467213 EMILIN1Q9Y6C2 1016 aa18.87■□□□□ 0.61
CHD1L-205ENST00000467213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms