RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 ZBTB7AO95365 584 aa25.44■■□□□ 1.66
PDE6B-206ENST00000467152 PDGFDQ9GZP0 370 aaPredicted RBP25.44■■□□□ 1.66
PDE6B-206ENST00000467152 EMILIN1Q9Y6C2 1016 aa25.44■■□□□ 1.66
PDE6B-206ENST00000467152 RTL1A6NKG5 1358 aa25.44■■□□□ 1.66
PDE6B-206ENST00000467152 NSD2O96028 1365 aa25.44■■□□□ 1.66
PDE6B-206ENST00000467152 CHD4Q14839 1912 aa25.43■■□□□ 1.66
PDE6B-206ENST00000467152 HSP90AB2PQ58FF8 381 aa25.43■■□□□ 1.66
PDE6B-206ENST00000467152 POLKQ9UBT6 870 aa25.43■■□□□ 1.66
PDE6B-206ENST00000467152 PTGER2P43116 358 aa25.42■■□□□ 1.66
PDE6B-206ENST00000467152 DOT1LQ8TEK3 1739 aa25.42■■□□□ 1.66
PDE6B-206ENST00000467152 SHANK3Q9BYB0 1731 aa25.41■■□□□ 1.66
PDE6B-206ENST00000467152 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
PDE6B-206ENST00000467152 TNNT2P45379 298 aaPredicted RBP25.41■■□□□ 1.66
PDE6B-206ENST00000467152 MORC1Q86VD1 984 aa25.41■■□□□ 1.66
PDE6B-206ENST00000467152 MTFR1LQ9H019 292 aa25.41■■□□□ 1.66
PDE6B-206ENST00000467152 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
PDE6B-206ENST00000467152 RGPD2P0DJD1 1756 aa25.41■■□□□ 1.66
PDE6B-206ENST00000467152 ACSBG1Q96GR2 724 aa25.4■■□□□ 1.66
PDE6B-206ENST00000467152 LY75O60449 1722 aa25.39■■□□□ 1.65
PDE6B-206ENST00000467152 COL24A1Q17RW2 1714 aa25.39■■□□□ 1.65
PDE6B-206ENST00000467152 INSRP06213 1382 aa25.39■■□□□ 1.65
PDE6B-206ENST00000467152 FLT4P35916 1363 aa25.39■■□□□ 1.65
PDE6B-206ENST00000467152 MAP2P11137 1827 aaKnown RBP25.38■■□□□ 1.65
PDE6B-206ENST00000467152 TUBGCP6Q96RT7 1819 aa25.37■■□□□ 1.65
PDE6B-206ENST00000467152 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
PDE6B-206ENST00000467152 ATF5Q9Y2D1 282 aaPredicted RBP25.37■■□□□ 1.65
PDE6B-206ENST00000467152 ANKRD26Q9UPS8 1709 aa25.37■■□□□ 1.65
PDE6B-206ENST00000467152 NBPF6Q5VWK0 638 aa25.36■■□□□ 1.65
PDE6B-206ENST00000467152 NBPF4Q96M43 638 aa25.36■■□□□ 1.65
PDE6B-206ENST00000467152 SGIP1Q9BQI5 828 aa25.34■■□□□ 1.65
PDE6B-206ENST00000467152 MAP3K5Q99683 1374 aa25.33■■□□□ 1.65
PDE6B-206ENST00000467152 CC2D1BQ5T0F9 858 aaKnown RBP25.32■■□□□ 1.64
PDE6B-206ENST00000467152 FHDC1Q9C0D6 1143 aaPredicted RBP25.32■■□□□ 1.64
PDE6B-206ENST00000467152 NPC1L1Q9UHC9 1359 aa25.31■■□□□ 1.64
PDE6B-206ENST00000467152 SLC27A3Q5K4L6 730 aa25.31■■□□□ 1.64
PDE6B-206ENST00000467152 SYT17Q9BSW7 474 aa25.3■■□□□ 1.64
PDE6B-206ENST00000467152 UTRNP46939 3433 aa25.3■■□□□ 1.64
PDE6B-206ENST00000467152 SMG6Q86US8 1419 aaKnown RBP25.29■■□□□ 1.64
PDE6B-206ENST00000467152 USHBP1Q8N6Y0 703 aa25.28■■□□□ 1.64
PDE6B-206ENST00000467152 ZNF827Q17R98 1081 aa25.27■■□□□ 1.64
PDE6B-206ENST00000467152 DDX54Q8TDD1 881 aaKnown RBP25.27■■□□□ 1.64
PDE6B-206ENST00000467152 ARXQ96QS3 562 aa25.27■■□□□ 1.64
PDE6B-206ENST00000467152 LRRC4BQ9NT99 713 aa25.27■■□□□ 1.64
PDE6B-206ENST00000467152 MEGF6O75095 1541 aa25.27■■□□□ 1.64
PDE6B-206ENST00000467152 SLC16A10Q8TF71 515 aa25.26■■□□□ 1.63
PDE6B-206ENST00000467152 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
PDE6B-206ENST00000467152 AKT1S1Q96B36 256 aa25.25■■□□□ 1.63
PDE6B-206ENST00000467152 EYA1Q99502 592 aa25.25■■□□□ 1.63
PDE6B-206ENST00000467152 CNGB1Q14028 1251 aaPredicted RBP25.24■■□□□ 1.63
PDE6B-206ENST00000467152 MTHFSP49914 203 aa25.22■■□□□ 1.63
PDE6B-206ENST00000467152 C5P01031 1676 aa25.22■■□□□ 1.63
PDE6B-206ENST00000467152 ZCRB1Q8TBF4 217 aaKnown RBP25.21■■□□□ 1.63
PDE6B-206ENST00000467152 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
PDE6B-206ENST00000467152 SYTL4Q96C24 671 aaPredicted RBP25.2■■□□□ 1.62
PDE6B-206ENST00000467152 TAF1LQ8IZX4 1826 aa25.19■■□□□ 1.62
PDE6B-206ENST00000467152 PRIM1P49642 420 aaKnown RBP25.19■■□□□ 1.62
PDE6B-206ENST00000467152 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
PDE6B-206ENST00000467152 PNPLA7Q6ZV29 1317 aa25.18■■□□□ 1.62
PDE6B-206ENST00000467152 PKD1L3Q7Z443 1732 aa25.18■■□□□ 1.62
PDE6B-206ENST00000467152 TATP17735 454 aaPredicted RBP25.18■■□□□ 1.62
PDE6B-206ENST00000467152 POLD1P28340 1107 aa25.18■■□□□ 1.62
PDE6B-206ENST00000467152 ITGB4P16144 1822 aa25.16■■□□□ 1.62
PDE6B-206ENST00000467152 DDX10Q13206 875 aaKnown RBP25.16■■□□□ 1.62
PDE6B-206ENST00000467152 ZNF784Q8NCA9 323 aaPredicted RBP25.16■■□□□ 1.62
PDE6B-206ENST00000467152 TFCP2L1Q9NZI6 479 aa25.16■■□□□ 1.62
PDE6B-206ENST00000467152 IL13P35225 146 aa25.15■■□□□ 1.62
PDE6B-206ENST00000467152 IGSF1Q8N6C5 1336 aa25.14■■□□□ 1.62
PDE6B-206ENST00000467152 TOGARAM1Q9Y4F4 1720 aa25.13■■□□□ 1.61
PDE6B-206ENST00000467152 HMGB2P26583 209 aaKnown RBP25.13■■□□□ 1.61
PDE6B-206ENST00000467152 CCNL1Q9UK58 526 aaPredicted RBP25.13■■□□□ 1.61
PDE6B-206ENST00000467152 PCDH11XQ9BZA7 1347 aa25.12■■□□□ 1.61
PDE6B-206ENST00000467152 PCDH11YQ9BZA8 1340 aa25.12■■□□□ 1.61
PDE6B-206ENST00000467152 GOLGB1Q14789 3259 aaKnown RBP25.09■■□□□ 1.61
PDE6B-206ENST00000467152 CYP27B1O15528 508 aa25.08■■□□□ 1.61
PDE6B-206ENST00000467152 PPP2R1AP30153 589 aa25.08■■□□□ 1.61
PDE6B-206ENST00000467152 KCNQ4P56696 695 aa25.08■■□□□ 1.61
PDE6B-206ENST00000467152 GPR162Q16538 588 aa25.08■■□□□ 1.61
PDE6B-206ENST00000467152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.08■■□□□ 1.61
PDE6B-206ENST00000467152 DIAPH1O60610 1272 aaKnown RBP25.07■■□□□ 1.6
PDE6B-206ENST00000467152 AEBP1Q8IUX7 1158 aa25.07■■□□□ 1.6
PDE6B-206ENST00000467152 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
PDE6B-206ENST00000467152 SULT6B1Q6IMI4 303 aa25.06■■□□□ 1.6
PDE6B-206ENST00000467152 KLHL34Q8N239 644 aa25.06■■□□□ 1.6
PDE6B-206ENST00000467152 SPG7Q9UQ90 795 aa25.06■■□□□ 1.6
PDE6B-206ENST00000467152 UBR3Q6ZT12 1888 aa25.05■■□□□ 1.6
PDE6B-206ENST00000467152 PALLDQ8WX93 1383 aa25.03■■□□□ 1.6
PDE6B-206ENST00000467152 KDRP35968 1356 aa25.02■■□□□ 1.6
PDE6B-206ENST00000467152 NKX1-1Q15270 411 aaPredicted RBP25.01■■□□□ 1.59
PDE6B-206ENST00000467152 FLAD1Q8NFF5 587 aa25.01■■□□□ 1.59
PDE6B-206ENST00000467152 COL3A1P02461 1466 aaPredicted RBP25.01■■□□□ 1.59
PDE6B-206ENST00000467152 MSH5O43196 834 aa25■■□□□ 1.59
PDE6B-206ENST00000467152 PLEKHO1Q53GL0 409 aaPredicted RBP25■■□□□ 1.59
PDE6B-206ENST00000467152 COL23A1Q86Y22 540 aaPredicted RBP25■■□□□ 1.59
PDE6B-206ENST00000467152 PLEKHG2Q9H7P9 1386 aa25■■□□□ 1.59
PDE6B-206ENST00000467152 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
PDE6B-206ENST00000467152 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
PDE6B-206ENST00000467152 HMOX1P09601 288 aa24.98■■□□□ 1.59
PDE6B-206ENST00000467152 IFNL2Q8IZJ0 200 aa24.98■■□□□ 1.59
PDE6B-206ENST00000467152 NLGN2Q8NFZ4 835 aa24.98■■□□□ 1.59
PDE6B-206ENST00000467152 SMARCC1Q92922 1105 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms