RNA–Protein interactions for RNA: ENST00000467052.1

COL15A1-202, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-202ENST00000467052 KCNQ4P56696 695 aa19.78■□□□□ 0.76
COL15A1-202ENST00000467052 ANKRD24Q8TF21 1146 aa19.78■□□□□ 0.76
COL15A1-202ENST00000467052 CD2APQ9Y5K6 639 aa19.78■□□□□ 0.76
COL15A1-202ENST00000467052 CICQ96RK0 1608 aaPredicted RBP19.77■□□□□ 0.76
COL15A1-202ENST00000467052 MSL1Q68DK7 614 aa19.77■□□□□ 0.76
COL15A1-202ENST00000467052 DDX54Q8TDD1 881 aaKnown RBP19.77■□□□□ 0.76
COL15A1-202ENST00000467052 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
COL15A1-202ENST00000467052 RGPD2P0DJD1 1756 aa19.76■□□□□ 0.75
COL15A1-202ENST00000467052 USP31Q70CQ4 1352 aa19.76■□□□□ 0.75
COL15A1-202ENST00000467052 NSD2O96028 1365 aa19.75■□□□□ 0.75
COL15A1-202ENST00000467052 COL23A1Q86Y22 540 aaPredicted RBP19.75■□□□□ 0.75
COL15A1-202ENST00000467052 USP47Q96K76 1375 aa19.74■□□□□ 0.75
COL15A1-202ENST00000467052 UBR3Q6ZT12 1888 aa19.73■□□□□ 0.75
COL15A1-202ENST00000467052 KIF3CO14782 793 aa19.72■□□□□ 0.75
COL15A1-202ENST00000467052 PRIM1P49642 420 aaKnown RBP19.72■□□□□ 0.75
COL15A1-202ENST00000467052 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
COL15A1-202ENST00000467052 TOGARAM1Q9Y4F4 1720 aa19.71■□□□□ 0.75
COL15A1-202ENST00000467052 HMGB2P26583 209 aaKnown RBP19.71■□□□□ 0.75
COL15A1-202ENST00000467052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.71■□□□□ 0.75
COL15A1-202ENST00000467052 IGSF1Q8N6C5 1336 aa19.71■□□□□ 0.75
COL15A1-202ENST00000467052 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
COL15A1-202ENST00000467052 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
COL15A1-202ENST00000467052 NME9Q86XW9 330 aa19.67■□□□□ 0.74
COL15A1-202ENST00000467052 ITGB4P16144 1822 aa19.67■□□□□ 0.74
COL15A1-202ENST00000467052 KIF13BQ9NQT8 1826 aa19.67■□□□□ 0.74
COL15A1-202ENST00000467052 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
COL15A1-202ENST00000467052 TOMM70O94826 608 aa19.66■□□□□ 0.74
COL15A1-202ENST00000467052 CAPN15O75808 1086 aa19.65■□□□□ 0.74
COL15A1-202ENST00000467052 WWC3Q9ULE0 1092 aa19.65■□□□□ 0.74
COL15A1-202ENST00000467052 MEGF6O75095 1541 aa19.65■□□□□ 0.74
COL15A1-202ENST00000467052 LTV1Q96GA3 475 aaPredicted RBP19.64■□□□□ 0.73
COL15A1-202ENST00000467052 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
COL15A1-202ENST00000467052 EDC4Q6P2E9 1401 aaKnown RBP19.64■□□□□ 0.73
COL15A1-202ENST00000467052 PKD1L3Q7Z443 1732 aa19.64■□□□□ 0.73
COL15A1-202ENST00000467052 N4BP2Q86UW6 1770 aaPredicted RBP19.64■□□□□ 0.73
COL15A1-202ENST00000467052 CD163L1Q9NR16 1453 aa19.63■□□□□ 0.73
COL15A1-202ENST00000467052 DNAJC5GQ8N7S2 189 aa19.63■□□□□ 0.73
COL15A1-202ENST00000467052 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
COL15A1-202ENST00000467052 ZCRB1Q8TBF4 217 aaKnown RBP19.62■□□□□ 0.73
COL15A1-202ENST00000467052 ROCK2O75116 1388 aaKnown RBP19.61■□□□□ 0.73
COL15A1-202ENST00000467052 HDGFL2Q7Z4V5 671 aaPredicted RBP19.61■□□□□ 0.73
COL15A1-202ENST00000467052 IP6K1Q92551 441 aa19.61■□□□□ 0.73
COL15A1-202ENST00000467052 AK7Q96M32 723 aa19.61■□□□□ 0.73
COL15A1-202ENST00000467052 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
COL15A1-202ENST00000467052 PALLDQ8WX93 1383 aa19.6■□□□□ 0.73
COL15A1-202ENST00000467052 TNRC6CQ9HCJ0 1690 aaKnown RBP19.59■□□□□ 0.73
COL15A1-202ENST00000467052 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
COL15A1-202ENST00000467052 COL13A1Q5TAT6 717 aaPredicted RBP19.59■□□□□ 0.73
COL15A1-202ENST00000467052 TNS4Q8IZW8 715 aa19.59■□□□□ 0.73
COL15A1-202ENST00000467052 ARFGEF1Q9Y6D6 1849 aa19.58■□□□□ 0.73
COL15A1-202ENST00000467052 KLRG1Q96E93 195 aa19.58■□□□□ 0.72
COL15A1-202ENST00000467052 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
COL15A1-202ENST00000467052 PHF14O94880 888 aa19.56■□□□□ 0.72
COL15A1-202ENST00000467052 PRELPP51888 382 aa19.56■□□□□ 0.72
COL15A1-202ENST00000467052 CGNL1Q0VF96 1302 aa19.55■□□□□ 0.72
COL15A1-202ENST00000467052 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
COL15A1-202ENST00000467052 SMG6Q86US8 1419 aaKnown RBP19.55■□□□□ 0.72
COL15A1-202ENST00000467052 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
COL15A1-202ENST00000467052 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
COL15A1-202ENST00000467052 MAP2P11137 1827 aaKnown RBP19.55■□□□□ 0.72
COL15A1-202ENST00000467052 PLEKHG2Q9H7P9 1386 aa19.55■□□□□ 0.72
COL15A1-202ENST00000467052 JMYQ8N9B5 988 aa19.54■□□□□ 0.72
COL15A1-202ENST00000467052 A0A1W2PP64 1363 aa19.54■□□□□ 0.72
COL15A1-202ENST00000467052 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
COL15A1-202ENST00000467052 PCDH11XQ9BZA7 1347 aa19.53■□□□□ 0.72
COL15A1-202ENST00000467052 PCDH11YQ9BZA8 1340 aa19.53■□□□□ 0.72
COL15A1-202ENST00000467052 NMRK2Q9NPI5 230 aa19.53■□□□□ 0.72
COL15A1-202ENST00000467052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.52■□□□□ 0.72
COL15A1-202ENST00000467052 HOXC9P31274 260 aa19.52■□□□□ 0.72
COL15A1-202ENST00000467052 AMPHP49418 695 aa19.52■□□□□ 0.72
COL15A1-202ENST00000467052 RAPGEF4Q8WZA2 1011 aa19.52■□□□□ 0.72
COL15A1-202ENST00000467052 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
COL15A1-202ENST00000467052 SSFA2P28290 1259 aa19.51■□□□□ 0.71
COL15A1-202ENST00000467052 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
COL15A1-202ENST00000467052 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
COL15A1-202ENST00000467052 FSTL1Q12841 308 aa19.5■□□□□ 0.71
COL15A1-202ENST00000467052 BCS1LQ9Y276 419 aa19.5■□□□□ 0.71
COL15A1-202ENST00000467052 MPRIPQ6WCQ1 1025 aa19.49■□□□□ 0.71
COL15A1-202ENST00000467052 C4AP0C0L4 1744 aa19.48■□□□□ 0.71
COL15A1-202ENST00000467052 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
COL15A1-202ENST00000467052 HTRA3P83110 453 aa19.48■□□□□ 0.71
COL15A1-202ENST00000467052 COG3Q96JB2 828 aa19.48■□□□□ 0.71
COL15A1-202ENST00000467052 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
COL15A1-202ENST00000467052 L3MBTL2Q969R5 705 aa19.47■□□□□ 0.71
COL15A1-202ENST00000467052 C10orf71Q711Q0 1435 aa19.47■□□□□ 0.71
COL15A1-202ENST00000467052 KCPQ6ZWJ8 1503 aa19.46■□□□□ 0.71
COL15A1-202ENST00000467052 SBF1O95248 1867 aa19.46■□□□□ 0.71
COL15A1-202ENST00000467052 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
COL15A1-202ENST00000467052 KDM2BQ8NHM5 1336 aa19.46■□□□□ 0.71
COL15A1-202ENST00000467052 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
COL15A1-202ENST00000467052 TGFB2P61812 414 aa19.45■□□□□ 0.7
COL15A1-202ENST00000467052 USHBP1Q8N6Y0 703 aa19.45■□□□□ 0.7
COL15A1-202ENST00000467052 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
COL15A1-202ENST00000467052 PCNTO95613 3336 aa19.45■□□□□ 0.7
COL15A1-202ENST00000467052 MMP10P09238 476 aa19.44■□□□□ 0.7
COL15A1-202ENST00000467052 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
COL15A1-202ENST00000467052 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
COL15A1-202ENST00000467052 GNPATO15228 680 aa19.42■□□□□ 0.7
COL15A1-202ENST00000467052 FCHSD2O94868 740 aa19.42■□□□□ 0.7
COL15A1-202ENST00000467052 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms