RNA–Protein interactions for RNA: ENST00000466905.4

SSR2-203, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-203ENST00000466905 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
SSR2-203ENST00000466905 EYA1Q99502 592 aa12.2□□□□□ -0.46
SSR2-203ENST00000466905 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
SSR2-203ENST00000466905 TNS2Q63HR2 1409 aa12.2□□□□□ -0.46
SSR2-203ENST00000466905 LRRC37A3O60309 1634 aa12.19□□□□□ -0.46
SSR2-203ENST00000466905 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
SSR2-203ENST00000466905 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
SSR2-203ENST00000466905 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
SSR2-203ENST00000466905 OVOS2A0A0G2JMS6 1433 aa12.18□□□□□ -0.46
SSR2-203ENST00000466905 NCAPD2Q15021 1401 aa12.18□□□□□ -0.46
SSR2-203ENST00000466905 APBA3O96018 575 aa12.17□□□□□ -0.46
SSR2-203ENST00000466905 IL13P35225 146 aa12.17□□□□□ -0.46
SSR2-203ENST00000466905 EZH2Q15910 746 aaKnown RBP12.17□□□□□ -0.46
SSR2-203ENST00000466905 ZCRB1Q8TBF4 217 aaKnown RBP12.17□□□□□ -0.46
SSR2-203ENST00000466905 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
SSR2-203ENST00000466905 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
SSR2-203ENST00000466905 MEGF6O75095 1541 aa12.16□□□□□ -0.46
SSR2-203ENST00000466905 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
SSR2-203ENST00000466905 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
SSR2-203ENST00000466905 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
SSR2-203ENST00000466905 SPG7Q9UQ90 795 aa12.15□□□□□ -0.46
SSR2-203ENST00000466905 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
SSR2-203ENST00000466905 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
SSR2-203ENST00000466905 PCDH11YQ9BZA8 1340 aa12.14□□□□□ -0.47
SSR2-203ENST00000466905 BCL9O00512 1426 aa12.14□□□□□ -0.47
SSR2-203ENST00000466905 U2SURPO15042 1029 aaKnown RBP12.14□□□□□ -0.47
SSR2-203ENST00000466905 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
SSR2-203ENST00000466905 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
SSR2-203ENST00000466905 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
SSR2-203ENST00000466905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSR2-203ENST00000466905 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
SSR2-203ENST00000466905 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
SSR2-203ENST00000466905 KDRP35968 1356 aa12.13□□□□□ -0.47
SSR2-203ENST00000466905 AMOTQ4VCS5 1084 aa12.12□□□□□ -0.47
SSR2-203ENST00000466905 PLEKHO1Q53GL0 409 aaPredicted RBP12.12□□□□□ -0.47
SSR2-203ENST00000466905 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
SSR2-203ENST00000466905 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
SSR2-203ENST00000466905 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
SSR2-203ENST00000466905 ANP32CO43423 234 aa12.11□□□□□ -0.47
SSR2-203ENST00000466905 HMOX1P09601 288 aa12.11□□□□□ -0.47
SSR2-203ENST00000466905 R3HDM1Q15032 1099 aaKnown RBP12.11□□□□□ -0.47
SSR2-203ENST00000466905 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
SSR2-203ENST00000466905 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
SSR2-203ENST00000466905 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
SSR2-203ENST00000466905 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
SSR2-203ENST00000466905 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
SSR2-203ENST00000466905 HSP90AB1P08238 724 aaKnown RBP12.09□□□□□ -0.47
SSR2-203ENST00000466905 CYP27B1O15528 508 aa12.08□□□□□ -0.48
SSR2-203ENST00000466905 NEFMP07197 916 aa12.08□□□□□ -0.48
SSR2-203ENST00000466905 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
SSR2-203ENST00000466905 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
SSR2-203ENST00000466905 FCHSD2O94868 740 aa12.07□□□□□ -0.48
SSR2-203ENST00000466905 PHKG2P15735 406 aa12.07□□□□□ -0.48
SSR2-203ENST00000466905 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
SSR2-203ENST00000466905 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
SSR2-203ENST00000466905 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
SSR2-203ENST00000466905 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
SSR2-203ENST00000466905 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
SSR2-203ENST00000466905 KCNQ2O43526 872 aa12.06□□□□□ -0.48
SSR2-203ENST00000466905 PRKAR2BP31323 418 aa12.06□□□□□ -0.48
SSR2-203ENST00000466905 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SSR2-203ENST00000466905 NBPF14Q5TI25 921 aa12.06□□□□□ -0.48
SSR2-203ENST00000466905 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
SSR2-203ENST00000466905 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
SSR2-203ENST00000466905 SBF2Q86WG5 1849 aa12.05□□□□□ -0.48
SSR2-203ENST00000466905 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
SSR2-203ENST00000466905 GAS2L2Q8NHY3 880 aa12.05□□□□□ -0.48
SSR2-203ENST00000466905 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
SSR2-203ENST00000466905 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
SSR2-203ENST00000466905 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
SSR2-203ENST00000466905 PLSCR1O15162 318 aa12.04□□□□□ -0.48
SSR2-203ENST00000466905 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
SSR2-203ENST00000466905 AKAP4Q5JQC9 854 aa12.04□□□□□ -0.48
SSR2-203ENST00000466905 PROM2Q8N271 834 aa12.04□□□□□ -0.48
SSR2-203ENST00000466905 DOT1LQ8TEK3 1739 aa12.03□□□□□ -0.48
SSR2-203ENST00000466905 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
SSR2-203ENST00000466905 MAPK8IP3Q9UPT6 1336 aa12.03□□□□□ -0.48
SSR2-203ENST00000466905 ERVV-2B6SEH9 535 aa12.02□□□□□ -0.49
SSR2-203ENST00000466905 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
SSR2-203ENST00000466905 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.49
SSR2-203ENST00000466905 CABP4P57796 275 aa12.01□□□□□ -0.49
SSR2-203ENST00000466905 TXNRD1Q16881 649 aa12.01□□□□□ -0.49
SSR2-203ENST00000466905 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
SSR2-203ENST00000466905 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
SSR2-203ENST00000466905 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
SSR2-203ENST00000466905 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
SSR2-203ENST00000466905 MAP3K5Q99683 1374 aa12□□□□□ -0.49
SSR2-203ENST00000466905 RGPD3A6NKT7 1758 aaPredicted RBP12□□□□□ -0.49
SSR2-203ENST00000466905 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
SSR2-203ENST00000466905 BTAF1O14981 1849 aa12□□□□□ -0.49
SSR2-203ENST00000466905 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
SSR2-203ENST00000466905 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
SSR2-203ENST00000466905 MRS2Q9HD23 443 aa11.99□□□□□ -0.49
SSR2-203ENST00000466905 KDM6AO15550 1401 aaPredicted RBP11.99□□□□□ -0.49
SSR2-203ENST00000466905 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
SSR2-203ENST00000466905 SLC27A3Q5K4L6 730 aa11.98□□□□□ -0.49
SSR2-203ENST00000466905 PIGBQ92521 554 aa11.98□□□□□ -0.49
SSR2-203ENST00000466905 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
SSR2-203ENST00000466905 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
SSR2-203ENST00000466905 ANO8Q9HCE9 1232 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms