RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 ELL2O00472 640 aaPredicted RBP26.09■■□□□ 1.77
CCDC78-207ENST00000466708 SKAP1Q86WV1 359 aa26.09■■□□□ 1.77
CCDC78-207ENST00000466708 CHMP4BQ9H444 224 aaKnown RBP26.09■■□□□ 1.77
CCDC78-207ENST00000466708 GCP02774 474 aa26.08■■□□□ 1.77
CCDC78-207ENST00000466708 USP19O94966 1318 aa26.08■■□□□ 1.77
CCDC78-207ENST00000466708 LTV1Q96GA3 475 aaPredicted RBP26.07■■□□□ 1.76
CCDC78-207ENST00000466708 GNAT3A8MTJ3 354 aa26.05■■□□□ 1.76
CCDC78-207ENST00000466708 ARHGEF25Q86VW2 580 aa26.05■■□□□ 1.76
CCDC78-207ENST00000466708 XPCQ01831 940 aaPredicted RBP26.04■■□□□ 1.76
CCDC78-207ENST00000466708 CADPS2Q86UW7 1296 aa26.04■■□□□ 1.76
CCDC78-207ENST00000466708 ZBTB40Q9NUA8 1239 aa26.04■■□□□ 1.76
CCDC78-207ENST00000466708 HSPA2P54652 639 aa26.04■■□□□ 1.76
CCDC78-207ENST00000466708 API5Q9BZZ5 524 aaKnown RBP26.04■■□□□ 1.76
CCDC78-207ENST00000466708 LRRC37A3O60309 1634 aa26.03■■□□□ 1.76
CCDC78-207ENST00000466708 ANP32AP39687 249 aaKnown RBP26.03■■□□□ 1.76
CCDC78-207ENST00000466708 RGS3P49796 1198 aa26.02■■□□□ 1.76
CCDC78-207ENST00000466708 HDAC1Q13547 482 aaPredicted RBP26.02■■□□□ 1.76
CCDC78-207ENST00000466708 MAP3K5Q99683 1374 aa26.02■■□□□ 1.76
CCDC78-207ENST00000466708 ABCC4O15439 1325 aa26.01■■□□□ 1.75
CCDC78-207ENST00000466708 LMOD2Q6P5Q4 547 aa26.01■■□□□ 1.75
CCDC78-207ENST00000466708 ALS2Q96Q42 1657 aa26.01■■□□□ 1.75
CCDC78-207ENST00000466708 FAM161AQ3B820 660 aa26■■□□□ 1.75
CCDC78-207ENST00000466708 BABAM1Q9NWV8 329 aa26■■□□□ 1.75
CCDC78-207ENST00000466708 TSPYL4Q9UJ04 414 aa26■■□□□ 1.75
CCDC78-207ENST00000466708 NBPF6Q5VWK0 638 aa26■■□□□ 1.75
CCDC78-207ENST00000466708 NBPF4Q96M43 638 aa26■■□□□ 1.75
CCDC78-207ENST00000466708 MSH6P52701 1360 aa25.98■■□□□ 1.75
CCDC78-207ENST00000466708 LMTK3Q96Q04 1460 aa25.97■■□□□ 1.75
CCDC78-207ENST00000466708 ZBTB7CA1YPR0 619 aa25.97■■□□□ 1.75
CCDC78-207ENST00000466708 USHBP1Q8N6Y0 703 aa25.97■■□□□ 1.75
CCDC78-207ENST00000466708 NCAPD2Q15021 1401 aa25.97■■□□□ 1.75
CCDC78-207ENST00000466708 NPHP3Q7Z494 1330 aa25.96■■□□□ 1.75
CCDC78-207ENST00000466708 KDM4FA0A1W2PPD8 638 aa25.96■■□□□ 1.75
CCDC78-207ENST00000466708 ZBTB7BO15156 539 aaPredicted RBP25.95■■□□□ 1.75
CCDC78-207ENST00000466708 MSH5O43196 834 aa25.95■■□□□ 1.75
CCDC78-207ENST00000466708 SOS1Q07889 1333 aaPredicted RBP25.95■■□□□ 1.74
CCDC78-207ENST00000466708 KRT24Q2M2I5 525 aa25.95■■□□□ 1.74
CCDC78-207ENST00000466708 IL17REQ8NFR9 667 aa25.94■■□□□ 1.74
CCDC78-207ENST00000466708 PDZRN3Q9UPQ7 1066 aa25.94■■□□□ 1.74
CCDC78-207ENST00000466708 PTPRCP08575 1304 aa25.94■■□□□ 1.74
CCDC78-207ENST00000466708 MIS18AQ9NYP9 233 aa25.93■■□□□ 1.74
CCDC78-207ENST00000466708 STRCQ7RTU9 1775 aa25.93■■□□□ 1.74
CCDC78-207ENST00000466708 TAF7Q15545 349 aaPredicted RBP25.93■■□□□ 1.74
CCDC78-207ENST00000466708 C8orf34Q49A92 452 aa25.93■■□□□ 1.74
CCDC78-207ENST00000466708 RGPD2P0DJD1 1756 aa25.92■■□□□ 1.74
CCDC78-207ENST00000466708 CAMTA1Q9Y6Y1 1673 aa25.91■■□□□ 1.74
CCDC78-207ENST00000466708 AMOTQ4VCS5 1084 aa25.91■■□□□ 1.74
CCDC78-207ENST00000466708 ANKRD24Q8TF21 1146 aa25.91■■□□□ 1.74
CCDC78-207ENST00000466708 MED1Q15648 1581 aaPredicted RBP25.91■■□□□ 1.74
CCDC78-207ENST00000466708 PLEKHO1Q53GL0 409 aaPredicted RBP25.91■■□□□ 1.74
CCDC78-207ENST00000466708 SMC5Q8IY18 1101 aa25.91■■□□□ 1.74
CCDC78-207ENST00000466708 XIRP1Q702N8 1843 aaKnown RBP25.9■■□□□ 1.74
CCDC78-207ENST00000466708 CEMIPQ8WUJ3 1361 aa25.9■■□□□ 1.74
CCDC78-207ENST00000466708 INTS3Q68E01 1043 aaKnown RBP25.9■■□□□ 1.74
CCDC78-207ENST00000466708 IPO9Q96P70 1041 aaKnown RBP25.9■■□□□ 1.74
CCDC78-207ENST00000466708 LRRC59Q96AG4 307 aaKnown RBP25.89■■□□□ 1.74
CCDC78-207ENST00000466708 TNS3Q68CZ2 1445 aa25.88■■□□□ 1.73
CCDC78-207ENST00000466708 AKAP4Q5JQC9 854 aa25.87■■□□□ 1.73
CCDC78-207ENST00000466708 LMO7Q8WWI1 1683 aa25.87■■□□□ 1.73
CCDC78-207ENST00000466708 SLC4A2P04920 1241 aa25.86■■□□□ 1.73
CCDC78-207ENST00000466708 RGS12O14924 1447 aa25.86■■□□□ 1.73
CCDC78-207ENST00000466708 AXIN2Q9Y2T1 843 aa25.86■■□□□ 1.73
CCDC78-207ENST00000466708 VIRMAQ69YN4 1812 aaKnown RBP25.85■■□□□ 1.73
CCDC78-207ENST00000466708 PXDNQ92626 1479 aa25.85■■□□□ 1.73
CCDC78-207ENST00000466708 PLEKHG5O94827 1062 aa25.84■■□□□ 1.73
CCDC78-207ENST00000466708 CCDC30Q5VVM6 783 aa25.84■■□□□ 1.73
CCDC78-207ENST00000466708 ZNF530Q6P9A1 599 aaPredicted RBP25.84■■□□□ 1.73
CCDC78-207ENST00000466708 STK31Q9BXU1 1019 aa25.84■■□□□ 1.73
CCDC78-207ENST00000466708 ERBB3P21860 1342 aa25.84■■□□□ 1.73
CCDC78-207ENST00000466708 SPATA31A3Q5VYP0 1347 aa25.84■■□□□ 1.73
CCDC78-207ENST00000466708 ABCC6O95255 1503 aa25.83■■□□□ 1.73
CCDC78-207ENST00000466708 CACNA1FO60840 1977 aa25.83■■□□□ 1.73
CCDC78-207ENST00000466708 ZC3H6P61129 1189 aaKnown RBP25.83■■□□□ 1.73
CCDC78-207ENST00000466708 NPM2Q86SE8 214 aaKnown RBP25.83■■□□□ 1.73
CCDC78-207ENST00000466708 DDX17Q92841 729 aaKnown RBP25.83■■□□□ 1.73
CCDC78-207ENST00000466708 RGPD5Q99666 1765 aa25.82■■□□□ 1.72
CCDC78-207ENST00000466708 OVOS2A0A0G2JMS6 1433 aa25.82■■□□□ 1.72
CCDC78-207ENST00000466708 ERICH6Q7L0X2 663 aa25.81■■□□□ 1.72
CCDC78-207ENST00000466708 GCC1Q96CN9 775 aa25.81■■□□□ 1.72
CCDC78-207ENST00000466708 C1orf141Q5JVX7 400 aa25.8■■□□□ 1.72
CCDC78-207ENST00000466708 CHMP4AQ9BY43 222 aa25.8■■□□□ 1.72
CCDC78-207ENST00000466708 BRINP3Q76B58 766 aa25.79■■□□□ 1.72
CCDC78-207ENST00000466708 NUCB1Q02818 461 aa25.79■■□□□ 1.72
CCDC78-207ENST00000466708 NOP58Q9Y2X3 529 aaKnown RBP25.79■■□□□ 1.72
CCDC78-207ENST00000466708 COL18A1P39060 1754 aa25.78■■□□□ 1.72
CCDC78-207ENST00000466708 FAM208AQ9UK61 1670 aaKnown RBP25.78■■□□□ 1.72
CCDC78-207ENST00000466708 LGR6Q9HBX8 967 aa25.78■■□□□ 1.72
CCDC78-207ENST00000466708 TEFQ10587 303 aa25.77■■□□□ 1.72
CCDC78-207ENST00000466708 CRYBG1Q9Y4K1 1723 aa25.77■■□□□ 1.72
CCDC78-207ENST00000466708 PLEKHG2Q9H7P9 1386 aa25.77■■□□□ 1.72
CCDC78-207ENST00000466708 HOXB7P09629 217 aa25.77■■□□□ 1.72
CCDC78-207ENST00000466708 ZBTB47Q9UFB7 747 aaPredicted RBP25.77■■□□□ 1.72
CCDC78-207ENST00000466708 KDM3BQ7LBC6 1761 aa25.76■■□□□ 1.71
CCDC78-207ENST00000466708 CPDO75976 1380 aa25.76■■□□□ 1.71
CCDC78-207ENST00000466708 ANP32EQ9BTT0 268 aa25.76■■□□□ 1.71
CCDC78-207ENST00000466708 ZNF335Q9H4Z2 1342 aaPredicted RBP25.75■■□□□ 1.71
CCDC78-207ENST00000466708 RNMTO43148 476 aaKnown RBP25.75■■□□□ 1.71
CCDC78-207ENST00000466708 CCT4P50991 539 aaKnown RBP25.75■■□□□ 1.71
CCDC78-207ENST00000466708 DDRGK1Q96HY6 314 aa25.75■■□□□ 1.71
CCDC78-207ENST00000466708 C1orf115Q9H7X2 142 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms