RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 C6orf118Q5T5N4 469 aa7.92□□□□□ -1.14
CALD1-214ENST00000466704 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
CALD1-214ENST00000466704 TSEN34Q9BSV6 310 aaKnown RBP7.92□□□□□ -1.14
CALD1-214ENST00000466704 CHIC2Q9UKJ5 165 aa7.92□□□□□ -1.14
CALD1-214ENST00000466704 ATP5J2-PTCD1G3V325 749 aa7.91□□□□□ -1.14
CALD1-214ENST00000466704 ATP9BO43861 1147 aa7.91□□□□□ -1.14
CALD1-214ENST00000466704 BMP2P12643 396 aa7.91□□□□□ -1.14
CALD1-214ENST00000466704 RELBQ01201 579 aa7.91□□□□□ -1.14
CALD1-214ENST00000466704 DEPDC4Q8N2C3 294 aa7.91□□□□□ -1.14
CALD1-214ENST00000466704 AGBL1Q96MI9 1066 aa7.91□□□□□ -1.14
CALD1-214ENST00000466704 PURBQ96QR8 312 aaKnown RBP7.91□□□□□ -1.14
CALD1-214ENST00000466704 TFIP11Q9UBB9 837 aaKnown RBP7.91□□□□□ -1.14
CALD1-214ENST00000466704 PALM3A6NDB9 673 aaPredicted RBP7.9□□□□□ -1.14
CALD1-214ENST00000466704 LZTS3O60299 673 aaPredicted RBP7.9□□□□□ -1.14
CALD1-214ENST00000466704 NCOA4Q13772 614 aa7.9□□□□□ -1.14
CALD1-214ENST00000466704 CYP2U1Q7Z449 544 aa7.9□□□□□ -1.14
CALD1-214ENST00000466704 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
CALD1-214ENST00000466704 CCDC97Q96F63 343 aaPredicted RBP7.9□□□□□ -1.14
CALD1-214ENST00000466704 PPP1R12CQ9BZL4 782 aa7.9□□□□□ -1.14
CALD1-214ENST00000466704 USP17L3A6NCW0 530 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 USP17L4A6NCW7 530 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 USP17L2Q6R6M4 530 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 USP17L1Q7RTZ2 530 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 OSBPL3Q9H4L5 887 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 NOD1Q9Y239 953 aa7.89□□□□□ -1.15
CALD1-214ENST00000466704 PTGIRP43119 386 aa7.88□□□□□ -1.15
CALD1-214ENST00000466704 ZNF395Q9H8N7 513 aaPredicted RBP7.88□□□□□ -1.15
CALD1-214ENST00000466704 GMPR2Q9P2T1 348 aaKnown RBP7.88□□□□□ -1.15
CALD1-214ENST00000466704 SUPT5HO00267 1087 aaKnown RBP7.87□□□□□ -1.15
CALD1-214ENST00000466704 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
CALD1-214ENST00000466704 PLEKHM2Q8IWE5 1019 aa7.87□□□□□ -1.15
CALD1-214ENST00000466704 KIFC2Q96AC6 838 aa7.87□□□□□ -1.15
CALD1-214ENST00000466704 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
CALD1-214ENST00000466704 MAFBQ9Y5Q3 323 aaPredicted RBP7.87□□□□□ -1.15
CALD1-214ENST00000466704 RFX1P22670 979 aa7.86□□□□□ -1.15
CALD1-214ENST00000466704 PSME1Q06323 249 aa7.86□□□□□ -1.15
CALD1-214ENST00000466704 TRIM50Q86XT4 487 aa7.86□□□□□ -1.15
CALD1-214ENST00000466704 ARHGEF10LQ9HCE6 1279 aa7.86□□□□□ -1.15
CALD1-214ENST00000466704 POLMQ9NP87 494 aaPredicted RBP7.86□□□□□ -1.15
CALD1-214ENST00000466704 C11orf95C9JLR9 678 aaPredicted RBP7.85□□□□□ -1.15
CALD1-214ENST00000466704 MEN1O00255 615 aa7.85□□□□□ -1.15
CALD1-214ENST00000466704 SPINT1O43278 529 aa7.85□□□□□ -1.15
CALD1-214ENST00000466704 WFS1O76024 890 aa7.85□□□□□ -1.15
CALD1-214ENST00000466704 GNRH1P01148 92 aa7.85□□□□□ -1.15
CALD1-214ENST00000466704 RAB6BQ9NRW1 208 aa7.85□□□□□ -1.15
CALD1-214ENST00000466704 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
CALD1-214ENST00000466704 WIPF1O43516 503 aa7.84□□□□□ -1.15
CALD1-214ENST00000466704 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
CALD1-214ENST00000466704 GTF2IP78347 998 aa7.84□□□□□ -1.15
CALD1-214ENST00000466704 CCDC82Q8N4S0 544 aa7.84□□□□□ -1.15
CALD1-214ENST00000466704 KDF1Q8NAX2 398 aaPredicted RBP7.84□□□□□ -1.15
CALD1-214ENST00000466704 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
CALD1-214ENST00000466704 MKRN1Q9UHC7 482 aaKnown RBP7.84□□□□□ -1.15
CALD1-214ENST00000466704 A0A1W2PRU2 124 aa7.83□□□□□ -1.16
CALD1-214ENST00000466704 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
CALD1-214ENST00000466704 ESCO1Q5FWF5 840 aa7.83□□□□□ -1.16
CALD1-214ENST00000466704 CFAP70Q5T0N1 1121 aa7.83□□□□□ -1.16
CALD1-214ENST00000466704 TRIM47Q96LD4 638 aa7.83□□□□□ -1.16
CALD1-214ENST00000466704 NLRP3Q96P20 1036 aa7.83□□□□□ -1.16
CALD1-214ENST00000466704 TTLL8A6PVC2 850 aa7.82□□□□□ -1.16
CALD1-214ENST00000466704 CLN3Q13286 438 aa7.82□□□□□ -1.16
CALD1-214ENST00000466704 C1orf115Q9H7X2 142 aa7.82□□□□□ -1.16
CALD1-214ENST00000466704 VRTNQ9H8Y1 702 aa7.82□□□□□ -1.16
CALD1-214ENST00000466704 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
CALD1-214ENST00000466704 MAN1A2O60476 641 aa7.81□□□□□ -1.16
CALD1-214ENST00000466704 CTSOP43234 321 aaPredicted RBP7.81□□□□□ -1.16
CALD1-214ENST00000466704 GDF10P55107 478 aa7.81□□□□□ -1.16
CALD1-214ENST00000466704 LARP1Q6PKG0 1096 aaKnown RBP7.81□□□□□ -1.16
CALD1-214ENST00000466704 OGFOD1Q8N543 542 aa7.81□□□□□ -1.16
CALD1-214ENST00000466704 CNKSR1Q969H4 720 aa7.81□□□□□ -1.16
CALD1-214ENST00000466704 ETNK1Q9HBU6 452 aa7.81□□□□□ -1.16
CALD1-214ENST00000466704 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
CALD1-214ENST00000466704 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
CALD1-214ENST00000466704 SOS2Q07890 1332 aaPredicted RBP7.8□□□□□ -1.16
CALD1-214ENST00000466704 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
CALD1-214ENST00000466704 STAU1O95793 577 aaKnown RBP7.8□□□□□ -1.16
CALD1-214ENST00000466704 RASA1P20936 1047 aa7.8□□□□□ -1.16
CALD1-214ENST00000466704 SLC27A3Q5K4L6 730 aa7.8□□□□□ -1.16
CALD1-214ENST00000466704 ESYT1Q9BSJ8 1104 aa7.8□□□□□ -1.16
CALD1-214ENST00000466704 IL2RAP01589 272 aa7.79□□□□□ -1.16
CALD1-214ENST00000466704 SNRPBP14678 240 aaKnown RBP7.79□□□□□ -1.16
CALD1-214ENST00000466704 GPC1P35052 558 aa7.79□□□□□ -1.16
CALD1-214ENST00000466704 CLDN10P78369 228 aa7.79□□□□□ -1.16
CALD1-214ENST00000466704 INSM1Q01101 510 aaPredicted RBP7.79□□□□□ -1.16
CALD1-214ENST00000466704 CDCA8Q53HL2 280 aa7.79□□□□□ -1.16
CALD1-214ENST00000466704 KANK4Q5T7N3 995 aaPredicted RBP7.79□□□□□ -1.16
CALD1-214ENST00000466704 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
CALD1-214ENST00000466704 TPCN2Q8NHX9 752 aa7.79□□□□□ -1.16
CALD1-214ENST00000466704 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
CALD1-214ENST00000466704 ARID3AQ99856 593 aa7.79□□□□□ -1.16
CALD1-214ENST00000466704 SOBPA7XYQ1 873 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 INHAP05111 366 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
CALD1-214ENST00000466704 RNF144AP50876 292 aaPredicted RBP7.78□□□□□ -1.16
CALD1-214ENST00000466704 SCNN1DP51172 638 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.161e-6■■■■□ 23.2
CALD1-214ENST00000466704 CCDC102BQ68D86 513 aa7.78□□□□□ -1.16
CALD1-214ENST00000466704 LARGE2Q8N3Y3 721 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms