RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 ZNF784Q8NCA9 323 aaPredicted RBP22.8■■□□□ 1.24
BRD9-201ENST00000466684 TFCP2L1Q9NZI6 479 aa22.8■■□□□ 1.24
BRD9-201ENST00000466684 MEGF6O75095 1541 aa22.79■■□□□ 1.24
BRD9-201ENST00000466684 RGPD2P0DJD1 1756 aa22.79■■□□□ 1.24
BRD9-201ENST00000466684 CGNL1Q0VF96 1302 aa22.79■■□□□ 1.24
BRD9-201ENST00000466684 SHANK3Q9BYB0 1731 aa22.78■■□□□ 1.24
BRD9-201ENST00000466684 PNPLA7Q6ZV29 1317 aa22.78■■□□□ 1.24
BRD9-201ENST00000466684 CHD4Q14839 1912 aa22.78■■□□□ 1.24
BRD9-201ENST00000466684 LY75O60449 1722 aa22.78■■□□□ 1.24
BRD9-201ENST00000466684 SMG6Q86US8 1419 aaKnown RBP22.78■■□□□ 1.24
BRD9-201ENST00000466684 NSD2O96028 1365 aa22.77■■□□□ 1.24
BRD9-201ENST00000466684 FYB1O15117 783 aa22.77■■□□□ 1.24
BRD9-201ENST00000466684 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
BRD9-201ENST00000466684 KCNQ4P56696 695 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 NBPF6Q5VWK0 638 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 NBPF4Q96M43 638 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 GGNBP2Q9H3C7 697 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 CCNL1Q9UK58 526 aaPredicted RBP22.75■■□□□ 1.23
BRD9-201ENST00000466684 COL24A1Q17RW2 1714 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 USP47Q96K76 1375 aa22.75■■□□□ 1.23
BRD9-201ENST00000466684 GPR162Q16538 588 aa22.74■■□□□ 1.23
BRD9-201ENST00000466684 KLHL34Q8N239 644 aa22.74■■□□□ 1.23
BRD9-201ENST00000466684 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
BRD9-201ENST00000466684 TUBGCP6Q96RT7 1819 aa22.73■■□□□ 1.23
BRD9-201ENST00000466684 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
BRD9-201ENST00000466684 USHBP1Q8N6Y0 703 aa22.72■■□□□ 1.23
BRD9-201ENST00000466684 HMGB2P26583 209 aaKnown RBP22.71■■□□□ 1.23
BRD9-201ENST00000466684 INSRP06213 1382 aa22.71■■□□□ 1.23
BRD9-201ENST00000466684 KIF24Q5T7B8 1368 aa22.71■■□□□ 1.23
BRD9-201ENST00000466684 FLT4P35916 1363 aa22.7■■□□□ 1.22
BRD9-201ENST00000466684 KIF20BQ96Q89 1820 aa22.7■■□□□ 1.22
BRD9-201ENST00000466684 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.22
BRD9-201ENST00000466684 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.22
BRD9-201ENST00000466684 MSH5O43196 834 aa22.68■■□□□ 1.22
BRD9-201ENST00000466684 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
BRD9-201ENST00000466684 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
BRD9-201ENST00000466684 COL23A1Q86Y22 540 aaPredicted RBP22.65■■□□□ 1.22
BRD9-201ENST00000466684 C5P01031 1676 aa22.64■■□□□ 1.21
BRD9-201ENST00000466684 NLGN2Q8NFZ4 835 aa22.64■■□□□ 1.21
BRD9-201ENST00000466684 UTRNP46939 3433 aa22.64■■□□□ 1.21
BRD9-201ENST00000466684 PALLDQ8WX93 1383 aa22.63■■□□□ 1.21
BRD9-201ENST00000466684 MPRIPQ6WCQ1 1025 aa22.62■■□□□ 1.21
BRD9-201ENST00000466684 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
BRD9-201ENST00000466684 CYP27B1O15528 508 aa22.6■■□□□ 1.21
BRD9-201ENST00000466684 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
BRD9-201ENST00000466684 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
BRD9-201ENST00000466684 CARD14Q9BXL6 1004 aa22.6■■□□□ 1.21
BRD9-201ENST00000466684 NSD3Q9BZ95 1437 aa22.6■■□□□ 1.21
BRD9-201ENST00000466684 GRIN3BO60391 1043 aa22.59■■□□□ 1.21
BRD9-201ENST00000466684 EMILIN1Q9Y6C2 1016 aa22.59■■□□□ 1.21
BRD9-201ENST00000466684 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.21
BRD9-201ENST00000466684 MSL1Q68DK7 614 aa22.58■■□□□ 1.21
BRD9-201ENST00000466684 TAF1LQ8IZX4 1826 aa22.58■■□□□ 1.2
BRD9-201ENST00000466684 PKD1L3Q7Z443 1732 aa22.58■■□□□ 1.2
BRD9-201ENST00000466684 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
BRD9-201ENST00000466684 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
BRD9-201ENST00000466684 SPG7Q9UQ90 795 aa22.57■■□□□ 1.2
BRD9-201ENST00000466684 NCAPD2Q15021 1401 aa22.56■■□□□ 1.2
BRD9-201ENST00000466684 ITGB4P16144 1822 aa22.56■■□□□ 1.2
BRD9-201ENST00000466684 TOGARAM1Q9Y4F4 1720 aa22.56■■□□□ 1.2
BRD9-201ENST00000466684 CD2APQ9Y5K6 639 aa22.56■■□□□ 1.2
BRD9-201ENST00000466684 NKX1-1Q15270 411 aaPredicted RBP22.55■■□□□ 1.2
BRD9-201ENST00000466684 AK7Q96M32 723 aa22.55■■□□□ 1.2
BRD9-201ENST00000466684 C4BP0C0L5 1744 aa22.54■■□□□ 1.2
BRD9-201ENST00000466684 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
BRD9-201ENST00000466684 WASHC2AQ641Q2 1341 aa22.54■■□□□ 1.2
BRD9-201ENST00000466684 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
BRD9-201ENST00000466684 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.24e-6■□□□□ 8.3
BRD9-201ENST00000466684 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
BRD9-201ENST00000466684 PIGBQ92521 554 aa22.52■■□□□ 1.2
BRD9-201ENST00000466684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.52■■□□□ 1.24e-9■■■■□ 21.4
BRD9-201ENST00000466684 EYA1Q99502 592 aa22.49■■□□□ 1.19
BRD9-201ENST00000466684 MAP2P11137 1827 aaKnown RBP22.49■■□□□ 1.19
BRD9-201ENST00000466684 TMOD3Q9NYL9 352 aa22.48■■□□□ 1.19
BRD9-201ENST00000466684 LOC102724428A0A0B4J2F2 783 aa22.48■■□□□ 1.19
BRD9-201ENST00000466684 PHF14O94880 888 aa22.48■■□□□ 1.19
BRD9-201ENST00000466684 SSFA2P28290 1259 aa22.48■■□□□ 1.19
BRD9-201ENST00000466684 SIK1P57059 783 aa22.48■■□□□ 1.19
BRD9-201ENST00000466684 UBR3Q6ZT12 1888 aa22.48■■□□□ 1.19
BRD9-201ENST00000466684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.47■■□□□ 1.19
BRD9-201ENST00000466684 IFNL2Q8IZJ0 200 aa22.47■■□□□ 1.19
BRD9-201ENST00000466684 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
BRD9-201ENST00000466684 PHKG2P15735 406 aa22.45■■□□□ 1.18
BRD9-201ENST00000466684 AMIGO3Q86WK7 504 aa22.45■■□□□ 1.18
BRD9-201ENST00000466684 PLEKHG2Q9H7P9 1386 aa22.44■■□□□ 1.18
BRD9-201ENST00000466684 LINC00116Q8NCU8 138 aa22.44■■□□□ 1.18
BRD9-201ENST00000466684 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
BRD9-201ENST00000466684 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
BRD9-201ENST00000466684 POLR3GLQ9BT43 218 aa22.42■■□□□ 1.18
BRD9-201ENST00000466684 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
BRD9-201ENST00000466684 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
BRD9-201ENST00000466684 GNPATO15228 680 aa22.41■■□□□ 1.18
BRD9-201ENST00000466684 EIF4A2Q14240 407 aaKnown RBP22.41■■□□□ 1.18
BRD9-201ENST00000466684 SMIM5Q71RC9 77 aa22.41■■□□□ 1.18
BRD9-201ENST00000466684 GOLGB1Q14789 3259 aaKnown RBP22.41■■□□□ 1.18
BRD9-201ENST00000466684 IGSF1Q8N6C5 1336 aa22.4■■□□□ 1.18
BRD9-201ENST00000466684 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
BRD9-201ENST00000466684 ITPK1Q13572 414 aa22.4■■□□□ 1.18
BRD9-201ENST00000466684 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms