RNA–Protein interactions for RNA: ENST00000466629.1

ATP7B-207, Transcript of ATPase copper transporting beta, humanhuman

TSL 2

Gene ATP7B, Length 463 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-207ENST00000466629 CHD4Q14839 1912 aa19.5■□□□□ 0.71
ATP7B-207ENST00000466629 ANKRD36BQ8N2N9 1353 aa19.49■□□□□ 0.71
ATP7B-207ENST00000466629 NLGN2Q8NFZ4 835 aa19.49■□□□□ 0.71
ATP7B-207ENST00000466629 CCNL1Q9UK58 526 aaPredicted RBP19.49■□□□□ 0.71
ATP7B-207ENST00000466629 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
ATP7B-207ENST00000466629 MAP3K19Q56UN5 1328 aa19.49■□□□□ 0.71
ATP7B-207ENST00000466629 GRIN3BO60391 1043 aa19.46■□□□□ 0.71
ATP7B-207ENST00000466629 COL23A1Q86Y22 540 aaPredicted RBP19.45■□□□□ 0.7
ATP7B-207ENST00000466629 USP47Q96K76 1375 aa19.44■□□□□ 0.7
ATP7B-207ENST00000466629 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 RRS1Q15050 365 aaKnown RBP19.43■□□□□ 0.7
ATP7B-207ENST00000466629 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 MSL1Q68DK7 614 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 USHBP1Q8N6Y0 703 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 TONSLQ96HA7 1378 aa19.43■□□□□ 0.7
ATP7B-207ENST00000466629 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.7
ATP7B-207ENST00000466629 NSD2O96028 1365 aa19.42■□□□□ 0.7
ATP7B-207ENST00000466629 TATP17735 454 aaPredicted RBP19.4■□□□□ 0.7
ATP7B-207ENST00000466629 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
ATP7B-207ENST00000466629 TESK2Q96S53 571 aa19.4■□□□□ 0.7
ATP7B-207ENST00000466629 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
ATP7B-207ENST00000466629 FAM208AQ9UK61 1670 aaKnown RBP19.4■□□□□ 0.7
ATP7B-207ENST00000466629 QSER1Q2KHR3 1735 aa19.39■□□□□ 0.7
ATP7B-207ENST00000466629 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
ATP7B-207ENST00000466629 FYB1O15117 783 aa19.38■□□□□ 0.69
ATP7B-207ENST00000466629 MEGF6O75095 1541 aa19.38■□□□□ 0.69
ATP7B-207ENST00000466629 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
ATP7B-207ENST00000466629 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
ATP7B-207ENST00000466629 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
ATP7B-207ENST00000466629 CD2APQ9Y5K6 639 aa19.36■□□□□ 0.69
ATP7B-207ENST00000466629 LY75O60449 1722 aa19.36■□□□□ 0.69
ATP7B-207ENST00000466629 SMG6Q86US8 1419 aaKnown RBP19.35■□□□□ 0.69
ATP7B-207ENST00000466629 COL24A1Q17RW2 1714 aa19.35■□□□□ 0.69
ATP7B-207ENST00000466629 RTL1A6NKG5 1358 aa19.34■□□□□ 0.69
ATP7B-207ENST00000466629 HSP90AB2PQ58FF8 381 aa19.34■□□□□ 0.69
ATP7B-207ENST00000466629 TUBGCP6Q96RT7 1819 aa19.34■□□□□ 0.69
ATP7B-207ENST00000466629 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
ATP7B-207ENST00000466629 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
ATP7B-207ENST00000466629 RGPD2P0DJD1 1756 aa19.33■□□□□ 0.68
ATP7B-207ENST00000466629 TMF1P82094 1093 aa19.32■□□□□ 0.68
ATP7B-207ENST00000466629 AK7Q96M32 723 aa19.32■□□□□ 0.68
ATP7B-207ENST00000466629 GPBP1L1Q9HC44 474 aaPredicted RBP19.32■□□□□ 0.68
ATP7B-207ENST00000466629 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
ATP7B-207ENST00000466629 SMARCC1Q92922 1105 aaPredicted RBP19.31■□□□□ 0.68
ATP7B-207ENST00000466629 PHF14O94880 888 aa19.3■□□□□ 0.68
ATP7B-207ENST00000466629 IFFO2Q5TF58 517 aa19.3■□□□□ 0.68
ATP7B-207ENST00000466629 ZNF526Q8TF50 670 aaPredicted RBP19.3■□□□□ 0.68
ATP7B-207ENST00000466629 SHANK3Q9BYB0 1731 aa19.3■□□□□ 0.68
ATP7B-207ENST00000466629 INSRP06213 1382 aa19.3■□□□□ 0.68
ATP7B-207ENST00000466629 ATP10DQ9P241 1426 aa19.29■□□□□ 0.68
ATP7B-207ENST00000466629 CYP27B1O15528 508 aa19.29■□□□□ 0.68
ATP7B-207ENST00000466629 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
ATP7B-207ENST00000466629 GOLGB1Q14789 3259 aaKnown RBP19.28■□□□□ 0.68
ATP7B-207ENST00000466629 SMIM5Q71RC9 77 aa19.28■□□□□ 0.68
ATP7B-207ENST00000466629 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
ATP7B-207ENST00000466629 PIGBQ92521 554 aa19.27■□□□□ 0.68
ATP7B-207ENST00000466629 FLT4P35916 1363 aa19.27■□□□□ 0.68
ATP7B-207ENST00000466629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
ATP7B-207ENST00000466629 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
ATP7B-207ENST00000466629 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
ATP7B-207ENST00000466629 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
ATP7B-207ENST00000466629 C5P01031 1676 aa19.24■□□□□ 0.67
ATP7B-207ENST00000466629 AMIGO3Q86WK7 504 aa19.24■□□□□ 0.67
ATP7B-207ENST00000466629 EMILIN1Q9Y6C2 1016 aa19.24■□□□□ 0.67
ATP7B-207ENST00000466629 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
ATP7B-207ENST00000466629 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
ATP7B-207ENST00000466629 SSFA2P28290 1259 aa19.22■□□□□ 0.67
ATP7B-207ENST00000466629 SIK1P57059 783 aa19.22■□□□□ 0.67
ATP7B-207ENST00000466629 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
ATP7B-207ENST00000466629 HSPA6P17066 643 aa19.21■□□□□ 0.67
ATP7B-207ENST00000466629 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
ATP7B-207ENST00000466629 NSD3Q9BZ95 1437 aa19.2■□□□□ 0.66
ATP7B-207ENST00000466629 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
ATP7B-207ENST00000466629 LINC00116Q8NCU8 138 aa19.2■□□□□ 0.66
ATP7B-207ENST00000466629 CARD14Q9BXL6 1004 aa19.2■□□□□ 0.66
ATP7B-207ENST00000466629 C4BP0C0L5 1744 aa19.2■□□□□ 0.66
ATP7B-207ENST00000466629 GNPATO15228 680 aa19.19■□□□□ 0.66
ATP7B-207ENST00000466629 ASAP1Q9ULH1 1129 aa19.19■□□□□ 0.66
ATP7B-207ENST00000466629 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
ATP7B-207ENST00000466629 IFNL2Q8IZJ0 200 aa19.17■□□□□ 0.66
ATP7B-207ENST00000466629 EYA1Q99502 592 aa19.17■□□□□ 0.66
ATP7B-207ENST00000466629 ITPK1Q13572 414 aa19.16■□□□□ 0.66
ATP7B-207ENST00000466629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■□□□□ 9.8
ATP7B-207ENST00000466629 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
ATP7B-207ENST00000466629 ADCY9O60503 1353 aa19.16■□□□□ 0.66
ATP7B-207ENST00000466629 MMP10P09238 476 aa19.15■□□□□ 0.66
ATP7B-207ENST00000466629 PHKG2P15735 406 aa19.15■□□□□ 0.66
ATP7B-207ENST00000466629 TRAPPC3LQ5T215 181 aa19.15■□□□□ 0.66
ATP7B-207ENST00000466629 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
ATP7B-207ENST00000466629 ITGB4P16144 1822 aa19.14■□□□□ 0.65
ATP7B-207ENST00000466629 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
ATP7B-207ENST00000466629 TOGARAM1Q9Y4F4 1720 aa19.13■□□□□ 0.65
ATP7B-207ENST00000466629 KIF3CO14782 793 aa19.12■□□□□ 0.65
ATP7B-207ENST00000466629 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
ATP7B-207ENST00000466629 RBM42Q9BTD8 480 aaKnown RBP19.12■□□□□ 0.65
ATP7B-207ENST00000466629 BCS1LQ9Y276 419 aa19.12■□□□□ 0.65
ATP7B-207ENST00000466629 KIF20BQ96Q89 1820 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms