RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 ADAMTS8Q9UP79 889 aa19.76■□□□□ 0.75
SNED1-208ENST00000466618 NCAPD2Q15021 1401 aa19.76■□□□□ 0.75
SNED1-208ENST00000466618 BCL9LQ86UU0 1499 aa19.76■□□□□ 0.75
SNED1-208ENST00000466618 ILDR1Q86SU0 546 aaPredicted RBP19.76■□□□□ 0.75
SNED1-208ENST00000466618 PLCH1Q4KWH8 1693 aa19.75■□□□□ 0.75
SNED1-208ENST00000466618 RGPD5Q99666 1765 aa19.75■□□□□ 0.75
SNED1-208ENST00000466618 U2SURPO15042 1029 aaKnown RBP19.75■□□□□ 0.75
SNED1-208ENST00000466618 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
SNED1-208ENST00000466618 WDR43Q15061 677 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNED1-208ENST00000466618 MEX3CQ5U5Q3 659 aaKnown RBP19.74■□□□□ 0.75
SNED1-208ENST00000466618 DAXXQ9UER7 740 aaPredicted RBP19.74■□□□□ 0.75
SNED1-208ENST00000466618 U2AF1L5P0DN76 240 aaPredicted RBP19.74■□□□□ 0.75
SNED1-208ENST00000466618 U2AF1Q01081 240 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNED1-208ENST00000466618 LARP1Q6PKG0 1096 aaKnown RBP19.74■□□□□ 0.75
SNED1-208ENST00000466618 CDCA7LQ96GN5 454 aa19.74■□□□□ 0.75
SNED1-208ENST00000466618 KDRP35968 1356 aa19.74■□□□□ 0.75
SNED1-208ENST00000466618 EVA1CP58658 441 aa19.73■□□□□ 0.75
SNED1-208ENST00000466618 C8orf34Q49A92 452 aa19.73■□□□□ 0.75
SNED1-208ENST00000466618 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
SNED1-208ENST00000466618 STRN4Q9NRL3 753 aa19.73■□□□□ 0.75
SNED1-208ENST00000466618 NWD2Q9ULI1 1742 aa19.73■□□□□ 0.75
SNED1-208ENST00000466618 NRAPQ86VF7 1730 aa19.73■□□□□ 0.75
SNED1-208ENST00000466618 CSB-PGBD3P0DP91 1061 aa19.72■□□□□ 0.75
SNED1-208ENST00000466618 CRB1P82279 1406 aa19.71■□□□□ 0.75
SNED1-208ENST00000466618 FCHSD2O94868 740 aa19.71■□□□□ 0.75
SNED1-208ENST00000466618 SULT6B1Q6IMI4 303 aa19.71■□□□□ 0.75
SNED1-208ENST00000466618 AEBP1Q8IUX7 1158 aa19.71■□□□□ 0.75
SNED1-208ENST00000466618 CARD10Q9BWT7 1032 aa19.71■□□□□ 0.75
SNED1-208ENST00000466618 RRAGDQ9NQL2 400 aaPredicted RBP19.71■□□□□ 0.75
SNED1-208ENST00000466618 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
SNED1-208ENST00000466618 AFF2P51816 1311 aa19.7■□□□□ 0.74
SNED1-208ENST00000466618 HMOX1P09601 288 aa19.7■□□□□ 0.74
SNED1-208ENST00000466618 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
SNED1-208ENST00000466618 TOM1L2Q6ZVM7 507 aa19.7■□□□□ 0.74
SNED1-208ENST00000466618 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
SNED1-208ENST00000466618 USP21Q9UK80 565 aa19.7■□□□□ 0.74
SNED1-208ENST00000466618 FAM208AQ9UK61 1670 aaKnown RBP19.7■□□□□ 0.74
SNED1-208ENST00000466618 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
SNED1-208ENST00000466618 VPS72Q15906 364 aa19.68■□□□□ 0.74
SNED1-208ENST00000466618 SPATA31A5Q5VU36 1347 aa19.67■□□□□ 0.74
SNED1-208ENST00000466618 SPATA31A7Q8IWB4 1347 aa19.67■□□□□ 0.74
SNED1-208ENST00000466618 SPATA31A1Q5TZJ5 1347 aa19.66■□□□□ 0.74
SNED1-208ENST00000466618 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.66■□□□□ 0.74
SNED1-208ENST00000466618 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
SNED1-208ENST00000466618 PRKAR2BP31323 418 aa19.65■□□□□ 0.74
SNED1-208ENST00000466618 C20orf194Q5TEA3 1177 aa19.65■□□□□ 0.74
SNED1-208ENST00000466618 ATRNO75882 1429 aa19.64■□□□□ 0.74
SNED1-208ENST00000466618 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
SNED1-208ENST00000466618 RUNDC1Q96C34 613 aa19.63■□□□□ 0.73
SNED1-208ENST00000466618 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
SNED1-208ENST00000466618 THRAP3Q9Y2W1 955 aaKnown RBP19.63■□□□□ 0.73
SNED1-208ENST00000466618 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
SNED1-208ENST00000466618 CCDC146Q8IYE0 955 aa19.63■□□□□ 0.73
SNED1-208ENST00000466618 TCP11L2Q8N4U5 519 aa19.63■□□□□ 0.73
SNED1-208ENST00000466618 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
SNED1-208ENST00000466618 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
SNED1-208ENST00000466618 TRPC5Q9UL62 973 aaPredicted RBP19.61■□□□□ 0.73
SNED1-208ENST00000466618 MEGF6O75095 1541 aa19.61■□□□□ 0.73
SNED1-208ENST00000466618 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
SNED1-208ENST00000466618 ZNF772Q68DY9 489 aaPredicted RBP19.6■□□□□ 0.73
SNED1-208ENST00000466618 RAPGEF4Q8WZA2 1011 aa19.6■□□□□ 0.73
SNED1-208ENST00000466618 GJD4Q96KN9 370 aaPredicted RBP19.6■□□□□ 0.73
SNED1-208ENST00000466618 IL2RBP14784 551 aa19.59■□□□□ 0.73
SNED1-208ENST00000466618 QTRT2Q9H974 415 aaKnown RBP19.59■□□□□ 0.73
SNED1-208ENST00000466618 RGS17Q9UGC6 210 aaPredicted RBP19.59■□□□□ 0.73
SNED1-208ENST00000466618 GLIPR1L2Q4G1C9 344 aa19.59■□□□□ 0.73
SNED1-208ENST00000466618 OVOS2A0A0G2JMS6 1433 aa19.58■□□□□ 0.73
SNED1-208ENST00000466618 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
SNED1-208ENST00000466618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.72
SNED1-208ENST00000466618 CCDC9Q9Y3X0 531 aaKnown RBP19.58■□□□□ 0.72
SNED1-208ENST00000466618 GLI3P10071 1580 aa19.57■□□□□ 0.72
SNED1-208ENST00000466618 APAF1O14727 1248 aa19.57■□□□□ 0.72
SNED1-208ENST00000466618 MAPK8IP3Q9UPT6 1336 aa19.56■□□□□ 0.72
SNED1-208ENST00000466618 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
SNED1-208ENST00000466618 CDCA7Q9BWT1 371 aaPredicted RBP19.56■□□□□ 0.72
SNED1-208ENST00000466618 VIRMAQ69YN4 1812 aaKnown RBP19.56■□□□□ 0.72
SNED1-208ENST00000466618 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
SNED1-208ENST00000466618 AMOTQ4VCS5 1084 aa19.56■□□□□ 0.72
SNED1-208ENST00000466618 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
SNED1-208ENST00000466618 PLEKHO1Q53GL0 409 aaPredicted RBP19.54■□□□□ 0.72
SNED1-208ENST00000466618 NFE2L2Q16236 605 aa19.54■□□□□ 0.72
SNED1-208ENST00000466618 L1TD1Q5T7N2 865 aaKnown RBP19.54■□□□□ 0.72
SNED1-208ENST00000466618 ZMYND15Q9H091 742 aa19.54■□□□□ 0.72
SNED1-208ENST00000466618 FAM98CQ17RN3 349 aaKnown RBP19.53■□□□□ 0.72
SNED1-208ENST00000466618 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
SNED1-208ENST00000466618 GAS2L2Q8NHY3 880 aa19.53■□□□□ 0.72
SNED1-208ENST00000466618 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.72
SNED1-208ENST00000466618 ZCRB1Q8TBF4 217 aaKnown RBP19.52■□□□□ 0.72
SNED1-208ENST00000466618 SPG7Q9UQ90 795 aa19.52■□□□□ 0.72
SNED1-208ENST00000466618 PARP4Q9UKK3 1724 aaKnown RBP19.52■□□□□ 0.72
SNED1-208ENST00000466618 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
SNED1-208ENST00000466618 RGS3P49796 1198 aa19.51■□□□□ 0.71
SNED1-208ENST00000466618 RRP7AQ9Y3A4 280 aaKnown RBP19.51■□□□□ 0.71
SNED1-208ENST00000466618 WNK3Q9BYP7 1800 aa19.51■□□□□ 0.71
SNED1-208ENST00000466618 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
SNED1-208ENST00000466618 THSD7AQ9UPZ6 1657 aa19.5■□□□□ 0.71
SNED1-208ENST00000466618 CYP27B1O15528 508 aa19.5■□□□□ 0.71
SNED1-208ENST00000466618 RBM6P78332 1123 aaKnown RBP19.5■□□□□ 0.71
SNED1-208ENST00000466618 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
SNED1-208ENST00000466618 NGEFQ8N5V2 710 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms