RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 IL16Q14005 1332 aa15.82■□□□□ 0.12
VPS16-206ENST00000466415 MAP3K5Q99683 1374 aa15.82■□□□□ 0.12
VPS16-206ENST00000466415 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
VPS16-206ENST00000466415 MEGF6O75095 1541 aa15.81■□□□□ 0.12
VPS16-206ENST00000466415 C1orf141Q5JVX7 400 aa15.81■□□□□ 0.12
VPS16-206ENST00000466415 MEX3CQ5U5Q3 659 aaKnown RBP15.81■□□□□ 0.12
VPS16-206ENST00000466415 ZNF530Q6P9A1 599 aaPredicted RBP15.81■□□□□ 0.12
VPS16-206ENST00000466415 PARP4Q9UKK3 1724 aaKnown RBP15.81■□□□□ 0.12
VPS16-206ENST00000466415 NRAPQ86VF7 1730 aa15.8■□□□□ 0.12
VPS16-206ENST00000466415 NWD2Q9ULI1 1742 aa15.8■□□□□ 0.12
VPS16-206ENST00000466415 GNAT3A8MTJ3 354 aa15.8■□□□□ 0.12
VPS16-206ENST00000466415 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
VPS16-206ENST00000466415 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
VPS16-206ENST00000466415 SPG7Q9UQ90 795 aa15.8■□□□□ 0.12
VPS16-206ENST00000466415 DUSP27Q5VZP5 1158 aa15.79■□□□□ 0.12
VPS16-206ENST00000466415 THUMPD2Q9BTF0 503 aaKnown RBP15.79■□□□□ 0.12
VPS16-206ENST00000466415 LRP6O75581 1613 aa15.79■□□□□ 0.12
VPS16-206ENST00000466415 OVOS2A0A0G2JMS6 1433 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 IL2RBP14784 551 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 AKAP4Q5JQC9 854 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 MCM10Q7L590 875 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
VPS16-206ENST00000466415 USP35Q9P2H5 1018 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 LAS1LQ9Y4W2 734 aaKnown RBP15.78■□□□□ 0.12
VPS16-206ENST00000466415 SLIT2O94813 1529 aa15.78■□□□□ 0.12
VPS16-206ENST00000466415 GNAI1P63096 354 aa15.77■□□□□ 0.12
VPS16-206ENST00000466415 IFT57Q9NWB7 429 aa15.77■□□□□ 0.12
VPS16-206ENST00000466415 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.11
VPS16-206ENST00000466415 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
VPS16-206ENST00000466415 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
VPS16-206ENST00000466415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.76■□□□□ 0.11
VPS16-206ENST00000466415 CCDC9Q9Y3X0 531 aaKnown RBP15.76■□□□□ 0.11
VPS16-206ENST00000466415 LRRC37A3O60309 1634 aa15.75■□□□□ 0.11
VPS16-206ENST00000466415 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
VPS16-206ENST00000466415 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
VPS16-206ENST00000466415 UNC5CLQ8IV45 518 aa15.74■□□□□ 0.11
VPS16-206ENST00000466415 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
VPS16-206ENST00000466415 RCAN3Q9UKA8 241 aa15.74■□□□□ 0.11
VPS16-206ENST00000466415 NEFLP07196 543 aa15.73■□□□□ 0.11
VPS16-206ENST00000466415 IFNL2Q8IZJ0 200 aa15.73■□□□□ 0.11
VPS16-206ENST00000466415 ZCRB1Q8TBF4 217 aaKnown RBP15.73■□□□□ 0.11
VPS16-206ENST00000466415 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
VPS16-206ENST00000466415 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
VPS16-206ENST00000466415 PHKG2P15735 406 aa15.72■□□□□ 0.11
VPS16-206ENST00000466415 THRAP3Q9Y2W1 955 aaKnown RBP15.72■□□□□ 0.11
VPS16-206ENST00000466415 SUPT16HQ9Y5B9 1047 aaKnown RBP15.72■□□□□ 0.11
VPS16-206ENST00000466415 WNK3Q9BYP7 1800 aa15.72■□□□□ 0.11
VPS16-206ENST00000466415 SPATA31A1Q5TZJ5 1347 aa15.71■□□□□ 0.11
VPS16-206ENST00000466415 TEFQ10587 303 aa15.71■□□□□ 0.11
VPS16-206ENST00000466415 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
VPS16-206ENST00000466415 CDCA7Q9BWT1 371 aaPredicted RBP15.71■□□□□ 0.11
VPS16-206ENST00000466415 USP21Q9UK80 565 aa15.71■□□□□ 0.11
VPS16-206ENST00000466415 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.1
VPS16-206ENST00000466415 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 DISP2A7MBM2 1401 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 RNMTO43148 476 aaKnown RBP15.7■□□□□ 0.1
VPS16-206ENST00000466415 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 EXOSC9Q06265 439 aaKnown RBP15.7■□□□□ 0.1
VPS16-206ENST00000466415 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
VPS16-206ENST00000466415 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 MBIPQ9NS73 344 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 TSPYL4Q9UJ04 414 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
VPS16-206ENST00000466415 CT47B1P0C2W7 299 aaPredicted RBP15.69■□□□□ 0.1
VPS16-206ENST00000466415 VPS72Q15906 364 aa15.69■□□□□ 0.1
VPS16-206ENST00000466415 BCL9LQ86UU0 1499 aa15.69■□□□□ 0.1
VPS16-206ENST00000466415 AFF2P51816 1311 aa15.68■□□□□ 0.1
VPS16-206ENST00000466415 FBXO41Q8TF61 875 aa15.68■□□□□ 0.1
VPS16-206ENST00000466415 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
VPS16-206ENST00000466415 CHL1O00533 1208 aa15.67■□□□□ 0.1
VPS16-206ENST00000466415 CYP27B1O15528 508 aa15.67■□□□□ 0.1
VPS16-206ENST00000466415 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
VPS16-206ENST00000466415 DDX54Q8TDD1 881 aaKnown RBP15.67■□□□□ 0.1
VPS16-206ENST00000466415 DCAF5Q96JK2 942 aa15.67■□□□□ 0.1
VPS16-206ENST00000466415 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
VPS16-206ENST00000466415 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
VPS16-206ENST00000466415 KDM6AO15550 1401 aaPredicted RBP15.67■□□□□ 0.1
VPS16-206ENST00000466415 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
VPS16-206ENST00000466415 SHANK3Q9BYB0 1731 aa15.66■□□□□ 0.1
VPS16-206ENST00000466415 EXOC5O00471 708 aa15.66■□□□□ 0.1
VPS16-206ENST00000466415 BARGINQ6ZT62 677 aa15.66■□□□□ 0.1
VPS16-206ENST00000466415 A0A0G2JS52 829 aa15.65■□□□□ 0.1
VPS16-206ENST00000466415 MYT1Q01538 1121 aa15.65■□□□□ 0.1
VPS16-206ENST00000466415 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.65■□□□□ 0.1
VPS16-206ENST00000466415 SCN11AQ9UI33 1791 aa15.64■□□□□ 0.1
VPS16-206ENST00000466415 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
VPS16-206ENST00000466415 BTBD11A6QL63 1104 aa15.64■□□□□ 0.09
VPS16-206ENST00000466415 RRP1P56182 461 aaKnown RBP15.64■□□□□ 0.09
VPS16-206ENST00000466415 DDB1Q16531 1140 aa15.64■□□□□ 0.09
VPS16-206ENST00000466415 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
VPS16-206ENST00000466415 MRC1P22897 1456 aa15.64■□□□□ 0.09
VPS16-206ENST00000466415 CANXP27824 592 aaKnown RBP15.63■□□□□ 0.09
VPS16-206ENST00000466415 CABP4P57796 275 aa15.63■□□□□ 0.09
VPS16-206ENST00000466415 TWISTNBQ3B726 338 aaPredicted RBP15.63■□□□□ 0.09
VPS16-206ENST00000466415 SLC52A2Q9HAB3 445 aa15.63■□□□□ 0.09
VPS16-206ENST00000466415 TRPC5Q9UL62 973 aaPredicted RBP15.63■□□□□ 0.09
VPS16-206ENST00000466415 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms