RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 EIF4A2Q14240 407 aaKnown RBP16.12■□□□□ 0.17
EDEM3-204ENST00000466392 BTAF1O14981 1849 aa16.12■□□□□ 0.17
EDEM3-204ENST00000466392 PKD1L3Q7Z443 1732 aa16.11■□□□□ 0.17
EDEM3-204ENST00000466392 CAMKK2Q96RR4 588 aa16.11■□□□□ 0.17
EDEM3-204ENST00000466392 EYA1Q99502 592 aa16.11■□□□□ 0.17
EDEM3-204ENST00000466392 BCL9O00512 1426 aa16.11■□□□□ 0.17
EDEM3-204ENST00000466392 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
EDEM3-204ENST00000466392 RAPGEF4Q8WZA2 1011 aa16.1■□□□□ 0.17
EDEM3-204ENST00000466392 RGPD3A6NKT7 1758 aaPredicted RBP16.09■□□□□ 0.17
EDEM3-204ENST00000466392 RGPD4Q7Z3J3 1758 aa16.09■□□□□ 0.17
EDEM3-204ENST00000466392 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
EDEM3-204ENST00000466392 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
EDEM3-204ENST00000466392 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
EDEM3-204ENST00000466392 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.16
EDEM3-204ENST00000466392 PSDA5PKW4 1024 aaPredicted RBP16.07■□□□□ 0.16
EDEM3-204ENST00000466392 MTHFSP49914 203 aa16.06■□□□□ 0.16
EDEM3-204ENST00000466392 IGSF1Q8N6C5 1336 aa16.05■□□□□ 0.16
EDEM3-204ENST00000466392 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
EDEM3-204ENST00000466392 ITGB4P16144 1822 aa16.04■□□□□ 0.16
EDEM3-204ENST00000466392 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
EDEM3-204ENST00000466392 SYTL4Q96C24 671 aaPredicted RBP16.04■□□□□ 0.16
EDEM3-204ENST00000466392 PARD3Q8TEW0 1356 aa16.03■□□□□ 0.16
EDEM3-204ENST00000466392 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
EDEM3-204ENST00000466392 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
EDEM3-204ENST00000466392 CYP27B1O15528 508 aa16.03■□□□□ 0.16
EDEM3-204ENST00000466392 IL13P35225 146 aa16.02■□□□□ 0.16
EDEM3-204ENST00000466392 PRIM1P49642 420 aaKnown RBP16.02■□□□□ 0.16
EDEM3-204ENST00000466392 R3HDM1Q15032 1099 aaKnown RBP16.02■□□□□ 0.16
EDEM3-204ENST00000466392 PROM2Q8N271 834 aa16.02■□□□□ 0.16
EDEM3-204ENST00000466392 PLSCR1O15162 318 aa16.01■□□□□ 0.15
EDEM3-204ENST00000466392 COL3A1P02461 1466 aaPredicted RBP16.01■□□□□ 0.15
EDEM3-204ENST00000466392 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
EDEM3-204ENST00000466392 LY75O60449 1722 aa15.99■□□□□ 0.15
EDEM3-204ENST00000466392 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
EDEM3-204ENST00000466392 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
EDEM3-204ENST00000466392 HMOX1P09601 288 aa15.98■□□□□ 0.15
EDEM3-204ENST00000466392 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
EDEM3-204ENST00000466392 PAPPAQ13219 1627 aa15.97■□□□□ 0.15
EDEM3-204ENST00000466392 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
EDEM3-204ENST00000466392 KCNQ4P56696 695 aa15.97■□□□□ 0.15
EDEM3-204ENST00000466392 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
EDEM3-204ENST00000466392 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
EDEM3-204ENST00000466392 PHKG2P15735 406 aa15.96■□□□□ 0.15
EDEM3-204ENST00000466392 PPP2R1AP30153 589 aa15.96■□□□□ 0.15
EDEM3-204ENST00000466392 KDRP35968 1356 aa15.96■□□□□ 0.15
EDEM3-204ENST00000466392 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
EDEM3-204ENST00000466392 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
EDEM3-204ENST00000466392 NBPF14Q5TI25 921 aa15.94■□□□□ 0.14
EDEM3-204ENST00000466392 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
EDEM3-204ENST00000466392 LRRC4BQ9NT99 713 aa15.94■□□□□ 0.14
EDEM3-204ENST00000466392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.143e-6■□□□□ 8.1
EDEM3-204ENST00000466392 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
EDEM3-204ENST00000466392 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
EDEM3-204ENST00000466392 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
EDEM3-204ENST00000466392 CASZ1Q86V15 1759 aa15.92■□□□□ 0.14
EDEM3-204ENST00000466392 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-204ENST00000466392 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-204ENST00000466392 PDGFDQ9GZP0 370 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-204ENST00000466392 KDM6AO15550 1401 aaPredicted RBP15.92■□□□□ 0.14
EDEM3-204ENST00000466392 C5P01031 1676 aa15.92■□□□□ 0.14
EDEM3-204ENST00000466392 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
EDEM3-204ENST00000466392 LRP5O75197 1615 aa15.91■□□□□ 0.14
EDEM3-204ENST00000466392 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
EDEM3-204ENST00000466392 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
EDEM3-204ENST00000466392 PIGBQ92521 554 aa15.9■□□□□ 0.14
EDEM3-204ENST00000466392 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
EDEM3-204ENST00000466392 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
EDEM3-204ENST00000466392 AMOTQ4VCS5 1084 aa15.89■□□□□ 0.13
EDEM3-204ENST00000466392 STK32BQ9NY57 414 aa15.89■□□□□ 0.13
EDEM3-204ENST00000466392 SLC15A2Q16348 729 aa15.88■□□□□ 0.13
EDEM3-204ENST00000466392 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
EDEM3-204ENST00000466392 TMOD3Q9NYL9 352 aa15.88■□□□□ 0.13
EDEM3-204ENST00000466392 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
EDEM3-204ENST00000466392 MTHFSDQ2M296 383 aaKnown RBP15.87■□□□□ 0.13
EDEM3-204ENST00000466392 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
EDEM3-204ENST00000466392 DCAF5Q96JK2 942 aa15.86■□□□□ 0.13
EDEM3-204ENST00000466392 ASAP1Q9ULH1 1129 aa15.86■□□□□ 0.13
EDEM3-204ENST00000466392 SRCAPQ6ZRS2 3230 aa15.86■□□□□ 0.13
EDEM3-204ENST00000466392 QSER1Q2KHR3 1735 aa15.85■□□□□ 0.13
EDEM3-204ENST00000466392 SLC27A3Q5K4L6 730 aa15.85■□□□□ 0.13
EDEM3-204ENST00000466392 ADAMTS7Q9UKP4 1686 aa15.84■□□□□ 0.13
EDEM3-204ENST00000466392 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
EDEM3-204ENST00000466392 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
EDEM3-204ENST00000466392 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
EDEM3-204ENST00000466392 LGR6Q9HBX8 967 aa15.84■□□□□ 0.13
EDEM3-204ENST00000466392 C4BP0C0L5 1744 aa15.84■□□□□ 0.13
EDEM3-204ENST00000466392 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 HSP90AB1P08238 724 aaKnown RBP15.83■□□□□ 0.12
EDEM3-204ENST00000466392 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 CABP4P57796 275 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 AKAP4Q5JQC9 854 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 PHACTR3Q96KR7 559 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
EDEM3-204ENST00000466392 ERVV-2B6SEH9 535 aa15.82■□□□□ 0.12
EDEM3-204ENST00000466392 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
EDEM3-204ENST00000466392 SMIM5Q71RC9 77 aa15.81■□□□□ 0.12
EDEM3-204ENST00000466392 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
EDEM3-204ENST00000466392 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
EDEM3-204ENST00000466392 NUDCQ9Y266 331 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms