RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
CD40-204ENST00000466205 EYA1Q99502 592 aa13.89□□□□□ -0.19
CD40-204ENST00000466205 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
CD40-204ENST00000466205 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
CD40-204ENST00000466205 R3HDM1Q15032 1099 aaKnown RBP13.88□□□□□ -0.19
CD40-204ENST00000466205 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
CD40-204ENST00000466205 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
CD40-204ENST00000466205 BCL9O00512 1426 aa13.87□□□□□ -0.19
CD40-204ENST00000466205 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
CD40-204ENST00000466205 RREB1Q92766 1687 aa13.86□□□□□ -0.19
CD40-204ENST00000466205 DOT1LQ8TEK3 1739 aa13.86□□□□□ -0.19
CD40-204ENST00000466205 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
CD40-204ENST00000466205 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.19
CD40-204ENST00000466205 PLSCR1O15162 318 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 MTHFSP49914 203 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 TXNRD1Q16881 649 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 PROM2Q8N271 834 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 BTAF1O14981 1849 aa13.83□□□□□ -0.2
CD40-204ENST00000466205 CYP27B1O15528 508 aa13.82□□□□□ -0.2
CD40-204ENST00000466205 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
CD40-204ENST00000466205 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
CD40-204ENST00000466205 NBPF14Q5TI25 921 aa13.81□□□□□ -0.2
CD40-204ENST00000466205 ANO8Q9HCE9 1232 aaPredicted RBP13.81□□□□□ -0.2
CD40-204ENST00000466205 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
CD40-204ENST00000466205 IL13P35225 146 aa13.8□□□□□ -0.2
CD40-204ENST00000466205 KCNQ4P56696 695 aa13.8□□□□□ -0.2
CD40-204ENST00000466205 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
CD40-204ENST00000466205 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
CD40-204ENST00000466205 PKD1L3Q7Z443 1732 aa13.8□□□□□ -0.2
CD40-204ENST00000466205 RGPD3A6NKT7 1758 aaPredicted RBP13.8□□□□□ -0.2
CD40-204ENST00000466205 RGPD4Q7Z3J3 1758 aa13.8□□□□□ -0.2
CD40-204ENST00000466205 HMOX1P09601 288 aa13.79□□□□□ -0.2
CD40-204ENST00000466205 MPRIPQ6WCQ1 1025 aa13.79□□□□□ -0.2
CD40-204ENST00000466205 TOGARAM1Q9Y4F4 1720 aa13.78□□□□□ -0.2
CD40-204ENST00000466205 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CD40-204ENST00000466205 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
CD40-204ENST00000466205 NPC1L1Q9UHC9 1359 aa13.77□□□□□ -0.21
CD40-204ENST00000466205 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
CD40-204ENST00000466205 PHKG2P15735 406 aa13.76□□□□□ -0.21
CD40-204ENST00000466205 IFNL2Q8IZJ0 200 aa13.76□□□□□ -0.21
CD40-204ENST00000466205 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
CD40-204ENST00000466205 LRRC4BQ9NT99 713 aa13.76□□□□□ -0.21
CD40-204ENST00000466205 STK32BQ9NY57 414 aa13.76□□□□□ -0.21
CD40-204ENST00000466205 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
CD40-204ENST00000466205 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
CD40-204ENST00000466205 PLEKHO1Q53GL0 409 aaPredicted RBP13.74□□□□□ -0.21
CD40-204ENST00000466205 ZNF530Q6P9A1 599 aaPredicted RBP13.74□□□□□ -0.21
CD40-204ENST00000466205 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
CD40-204ENST00000466205 SLC15A2Q16348 729 aa13.73□□□□□ -0.21
CD40-204ENST00000466205 ZNF827Q17R98 1081 aa13.73□□□□□ -0.21
CD40-204ENST00000466205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
CD40-204ENST00000466205 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
CD40-204ENST00000466205 ITGB4P16144 1822 aa13.72□□□□□ -0.21
CD40-204ENST00000466205 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
CD40-204ENST00000466205 PIGBQ92521 554 aa13.72□□□□□ -0.21
CD40-204ENST00000466205 PAPPAQ13219 1627 aa13.72□□□□□ -0.21
CD40-204ENST00000466205 KDRP35968 1356 aa13.71□□□□□ -0.21
CD40-204ENST00000466205 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
CD40-204ENST00000466205 ZBTB7AO95365 584 aa13.71□□□□□ -0.21
CD40-204ENST00000466205 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
CD40-204ENST00000466205 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
CD40-204ENST00000466205 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
CD40-204ENST00000466205 LY75O60449 1722 aa13.7□□□□□ -0.22
CD40-204ENST00000466205 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
CD40-204ENST00000466205 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
CD40-204ENST00000466205 LRP5O75197 1615 aa13.7□□□□□ -0.22
CD40-204ENST00000466205 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
CD40-204ENST00000466205 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
CD40-204ENST00000466205 ASAP1Q9ULH1 1129 aa13.69□□□□□ -0.22
CD40-204ENST00000466205 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
CD40-204ENST00000466205 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
CD40-204ENST00000466205 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
CD40-204ENST00000466205 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
CD40-204ENST00000466205 DCAF5Q96JK2 942 aa13.68□□□□□ -0.22
CD40-204ENST00000466205 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
CD40-204ENST00000466205 CABP4P57796 275 aa13.67□□□□□ -0.22
CD40-204ENST00000466205 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
CD40-204ENST00000466205 MSH5O43196 834 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
CD40-204ENST00000466205 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
CD40-204ENST00000466205 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 SPON1Q9HCB6 807 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 C5P01031 1676 aa13.66□□□□□ -0.22
CD40-204ENST00000466205 PRKAR2BP31323 418 aa13.65□□□□□ -0.22
CD40-204ENST00000466205 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
CD40-204ENST00000466205 RBM42Q9BTD8 480 aaKnown RBP13.65□□□□□ -0.22
CD40-204ENST00000466205 PPP1R1BQ9UD71 204 aaPredicted RBP13.65□□□□□ -0.22
CD40-204ENST00000466205 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
CD40-204ENST00000466205 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
CD40-204ENST00000466205 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
CD40-204ENST00000466205 LOC102724428A0A0B4J2F2 783 aa13.64□□□□□ -0.23
CD40-204ENST00000466205 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
CD40-204ENST00000466205 ATP6V1AP38606 617 aa13.64□□□□□ -0.23
CD40-204ENST00000466205 SIK1P57059 783 aa13.64□□□□□ -0.23
CD40-204ENST00000466205 NFATC2IPQ8NCF5 419 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms