RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
LETM1-202ENST00000466175 TNNQ9UQP3 1299 aa23.3■■□□□ 1.32
LETM1-202ENST00000466175 KDRP35968 1356 aa23.3■■□□□ 1.32
LETM1-202ENST00000466175 NUTM2BA6NNL0 878 aaPredicted RBP23.3■■□□□ 1.32
LETM1-202ENST00000466175 NUTM2EB1AL46 878 aaPredicted RBP23.3■■□□□ 1.32
LETM1-202ENST00000466175 PLEKHG5O94827 1062 aa23.3■■□□□ 1.32
LETM1-202ENST00000466175 AMPHP49418 695 aa23.3■■□□□ 1.32
LETM1-202ENST00000466175 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
LETM1-202ENST00000466175 MED1Q15648 1581 aaPredicted RBP23.29■■□□□ 1.32
LETM1-202ENST00000466175 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
LETM1-202ENST00000466175 PCDHB15Q9Y5E8 787 aa23.29■■□□□ 1.32
LETM1-202ENST00000466175 LMOD2Q6P5Q4 547 aa23.27■■□□□ 1.32
LETM1-202ENST00000466175 AEBP1Q8IUX7 1158 aa23.27■■□□□ 1.32
LETM1-202ENST00000466175 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
LETM1-202ENST00000466175 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
LETM1-202ENST00000466175 RTL1A6NKG5 1358 aa23.27■■□□□ 1.32
LETM1-202ENST00000466175 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
LETM1-202ENST00000466175 ITPRIPQ8IWB1 547 aa23.26■■□□□ 1.31
LETM1-202ENST00000466175 MRPL50Q8N5N7 158 aaKnown RBP23.26■■□□□ 1.31
LETM1-202ENST00000466175 PAK3O75914 559 aaPredicted RBP23.25■■□□□ 1.31
LETM1-202ENST00000466175 RGS3P49796 1198 aa23.25■■□□□ 1.31
LETM1-202ENST00000466175 HDAC1Q13547 482 aaPredicted RBP23.25■■□□□ 1.31
LETM1-202ENST00000466175 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
LETM1-202ENST00000466175 SKAP1Q86WV1 359 aa23.25■■□□□ 1.31
LETM1-202ENST00000466175 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
LETM1-202ENST00000466175 SPATA31A3Q5VYP0 1347 aa23.25■■□□□ 1.31
LETM1-202ENST00000466175 TRPM3Q9HCF6 1732 aaPredicted RBP23.24■■□□□ 1.31
LETM1-202ENST00000466175 LRP6O75581 1613 aa23.24■■□□□ 1.31
LETM1-202ENST00000466175 KIAA0232Q92628 1395 aa23.23■■□□□ 1.31
LETM1-202ENST00000466175 CHL1O00533 1208 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 HTATSF1O43719 755 aaKnown RBP23.22■■□□□ 1.31
LETM1-202ENST00000466175 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 ZBTB47Q9UFB7 747 aaPredicted RBP23.22■■□□□ 1.31
LETM1-202ENST00000466175 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 TNS3Q68CZ2 1445 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 VIRMAQ69YN4 1812 aaKnown RBP23.22■■□□□ 1.31
LETM1-202ENST00000466175 SOX12O15370 315 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 C8orf34Q49A92 452 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 DDRGK1Q96HY6 314 aa23.22■■□□□ 1.31
LETM1-202ENST00000466175 FAM83GA6ND36 823 aa23.21■■□□□ 1.31
LETM1-202ENST00000466175 HOXC9P31274 260 aa23.21■■□□□ 1.31
LETM1-202ENST00000466175 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
LETM1-202ENST00000466175 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
LETM1-202ENST00000466175 TSPYL6Q8N831 410 aa23.19■■□□□ 1.3
LETM1-202ENST00000466175 CABLES1Q8TDN4 633 aa23.19■■□□□ 1.3
LETM1-202ENST00000466175 RTF1Q92541 710 aaKnown RBP23.19■■□□□ 1.3
LETM1-202ENST00000466175 EYA1Q99502 592 aa23.19■■□□□ 1.3
LETM1-202ENST00000466175 ADAMTS2O95450 1211 aa23.19■■□□□ 1.3
LETM1-202ENST00000466175 MEX3CQ5U5Q3 659 aaKnown RBP23.19■■□□□ 1.3
LETM1-202ENST00000466175 COL22A1Q8NFW1 1626 aaPredicted RBP23.18■■□□□ 1.3
LETM1-202ENST00000466175 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
LETM1-202ENST00000466175 NUTM2GQ5VZR2 741 aa23.18■■□□□ 1.3
LETM1-202ENST00000466175 C8orf58Q8NAV2 365 aa23.18■■□□□ 1.3
LETM1-202ENST00000466175 KCNH5Q8NCM2 988 aa23.18■■□□□ 1.3
LETM1-202ENST00000466175 CRB1P82279 1406 aa23.17■■□□□ 1.3
LETM1-202ENST00000466175 DCTN1Q14203 1278 aa23.17■■□□□ 1.3
LETM1-202ENST00000466175 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
LETM1-202ENST00000466175 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
LETM1-202ENST00000466175 PHRF1Q9P1Y6 1649 aaKnown RBP23.17■■□□□ 1.3
LETM1-202ENST00000466175 ABCC4O15439 1325 aa23.16■■□□□ 1.3
LETM1-202ENST00000466175 LTN1O94822 1766 aa23.15■■□□□ 1.3
LETM1-202ENST00000466175 MTHFSDQ2M296 383 aaKnown RBP23.15■■□□□ 1.3
LETM1-202ENST00000466175 NFAT5O94916 1531 aa23.14■■□□□ 1.3
LETM1-202ENST00000466175 MCM10Q7L590 875 aa23.13■■□□□ 1.29
LETM1-202ENST00000466175 SMC5Q8IY18 1101 aa23.13■■□□□ 1.29
LETM1-202ENST00000466175 IP6K1Q92551 441 aa23.13■■□□□ 1.29
LETM1-202ENST00000466175 LRRC37A3O60309 1634 aa23.12■■□□□ 1.29
LETM1-202ENST00000466175 ELL2O00472 640 aaPredicted RBP23.11■■□□□ 1.29
LETM1-202ENST00000466175 C8orf37Q96NL8 207 aa23.11■■□□□ 1.29
LETM1-202ENST00000466175 BABAM1Q9NWV8 329 aa23.11■■□□□ 1.29
LETM1-202ENST00000466175 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
LETM1-202ENST00000466175 ZBTB7BO15156 539 aaPredicted RBP23.11■■□□□ 1.29
LETM1-202ENST00000466175 SOS1Q07889 1333 aaPredicted RBP23.1■■□□□ 1.29
LETM1-202ENST00000466175 PTPRCP08575 1304 aa23.1■■□□□ 1.29
LETM1-202ENST00000466175 GNAT3A8MTJ3 354 aa23.08■■□□□ 1.29
LETM1-202ENST00000466175 RGS17Q9UGC6 210 aaPredicted RBP23.08■■□□□ 1.29
LETM1-202ENST00000466175 SLIT3O75094 1523 aa23.08■■□□□ 1.28
LETM1-202ENST00000466175 TSPYL4Q9UJ04 414 aa23.07■■□□□ 1.28
LETM1-202ENST00000466175 MAP3K5Q99683 1374 aa23.06■■□□□ 1.28
LETM1-202ENST00000466175 GCC1Q96CN9 775 aa23.06■■□□□ 1.28
LETM1-202ENST00000466175 NGLY1Q96IV0 654 aa23.06■■□□□ 1.28
LETM1-202ENST00000466175 CRYBG1Q9Y4K1 1723 aa23.06■■□□□ 1.28
LETM1-202ENST00000466175 INTS3Q68E01 1043 aaKnown RBP23.05■■□□□ 1.28
LETM1-202ENST00000466175 AFF2P51816 1311 aa23.04■■□□□ 1.28
LETM1-202ENST00000466175 NUCB1Q02818 461 aa23.02■■□□□ 1.28
LETM1-202ENST00000466175 USP19O94966 1318 aa23.01■■□□□ 1.27
LETM1-202ENST00000466175 LTV1Q96GA3 475 aaPredicted RBP23■■□□□ 1.27
LETM1-202ENST00000466175 UPF2Q9HAU5 1272 aaKnown RBP23■■□□□ 1.27
LETM1-202ENST00000466175 ZC3H6P61129 1189 aaKnown RBP22.99■■□□□ 1.27
LETM1-202ENST00000466175 POTEAQ6S8J7 498 aa22.99■■□□□ 1.27
LETM1-202ENST00000466175 ARHGEF25Q86VW2 580 aa22.99■■□□□ 1.27
LETM1-202ENST00000466175 GCP02774 474 aa22.98■■□□□ 1.27
LETM1-202ENST00000466175 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
LETM1-202ENST00000466175 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
LETM1-202ENST00000466175 DAXXQ9UER7 740 aaPredicted RBP22.98■■□□□ 1.27
LETM1-202ENST00000466175 RGS12O14924 1447 aa22.98■■□□□ 1.27
LETM1-202ENST00000466175 NCAPD2Q15021 1401 aa22.98■■□□□ 1.27
LETM1-202ENST00000466175 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
LETM1-202ENST00000466175 KRT24Q2M2I5 525 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms