RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 GPRASP1Q5JY77 1395 aa13.45□□□□□ -0.26
ATG3-203ENST00000465980 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
ATG3-203ENST00000465980 SLIT2O94813 1529 aa13.44□□□□□ -0.26
ATG3-203ENST00000465980 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
ATG3-203ENST00000465980 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
ATG3-203ENST00000465980 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
ATG3-203ENST00000465980 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
ATG3-203ENST00000465980 TBC1D12O60347 775 aa13.43□□□□□ -0.26
ATG3-203ENST00000465980 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
ATG3-203ENST00000465980 TRPM1Q7Z4N2 1603 aa13.42□□□□□ -0.26
ATG3-203ENST00000465980 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
ATG3-203ENST00000465980 NRAPQ86VF7 1730 aa13.42□□□□□ -0.26
ATG3-203ENST00000465980 DSG2Q14126 1118 aa13.42□□□□□ -0.26
ATG3-203ENST00000465980 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
ATG3-203ENST00000465980 ATAD2Q6PL18 1390 aa13.42□□□□□ -0.26
ATG3-203ENST00000465980 NEUROD1Q13562 356 aa13.41□□□□□ -0.26
ATG3-203ENST00000465980 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
ATG3-203ENST00000465980 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
ATG3-203ENST00000465980 CDK19Q9BWU1 502 aa13.41□□□□□ -0.26
ATG3-203ENST00000465980 PHRF1Q9P1Y6 1649 aaKnown RBP13.41□□□□□ -0.26
ATG3-203ENST00000465980 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
ATG3-203ENST00000465980 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
ATG3-203ENST00000465980 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
ATG3-203ENST00000465980 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
ATG3-203ENST00000465980 TK2O00142 265 aa13.38□□□□□ -0.27
ATG3-203ENST00000465980 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
ATG3-203ENST00000465980 CENPJQ9HC77 1338 aaPredicted RBP13.38□□□□□ -0.27
ATG3-203ENST00000465980 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
ATG3-203ENST00000465980 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
ATG3-203ENST00000465980 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
ATG3-203ENST00000465980 NUTM2GQ5VZR2 741 aa13.37□□□□□ -0.27
ATG3-203ENST00000465980 TONSLQ96HA7 1378 aa13.36□□□□□ -0.27
ATG3-203ENST00000465980 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
ATG3-203ENST00000465980 ACEP12821 1306 aa13.36□□□□□ -0.27
ATG3-203ENST00000465980 VPS72Q15906 364 aa13.35□□□□□ -0.27
ATG3-203ENST00000465980 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
ATG3-203ENST00000465980 A0A0G2JS52 829 aa13.34□□□□□ -0.27
ATG3-203ENST00000465980 MYT1Q01538 1121 aa13.34□□□□□ -0.27
ATG3-203ENST00000465980 BTG4Q9NY30 223 aa13.34□□□□□ -0.27
ATG3-203ENST00000465980 POLR3AO14802 1390 aaPredicted RBP13.33□□□□□ -0.27
ATG3-203ENST00000465980 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.27
ATG3-203ENST00000465980 NBPF8Q3BBV2 869 aa13.33□□□□□ -0.28
ATG3-203ENST00000465980 SEPT12Q8IYM1 358 aa13.33□□□□□ -0.28
ATG3-203ENST00000465980 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
ATG3-203ENST00000465980 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
ATG3-203ENST00000465980 NRKQ7Z2Y5 1582 aa13.32□□□□□ -0.28
ATG3-203ENST00000465980 CHRNA2Q15822 529 aa13.32□□□□□ -0.28
ATG3-203ENST00000465980 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
ATG3-203ENST00000465980 PLEKHG3A1L390 1219 aa13.31□□□□□ -0.28
ATG3-203ENST00000465980 ZC3H6P61129 1189 aaKnown RBP13.31□□□□□ -0.28
ATG3-203ENST00000465980 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
ATG3-203ENST00000465980 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
ATG3-203ENST00000465980 HCSTQ9UBK5 93 aa13.31□□□□□ -0.28
ATG3-203ENST00000465980 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
ATG3-203ENST00000465980 HRO43593 1189 aa13.3□□□□□ -0.28
ATG3-203ENST00000465980 DMRTA1Q5VZB9 504 aa13.29□□□□□ -0.28
ATG3-203ENST00000465980 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
ATG3-203ENST00000465980 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
ATG3-203ENST00000465980 PSEN2P49810 448 aa13.28□□□□□ -0.28
ATG3-203ENST00000465980 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
ATG3-203ENST00000465980 CABP1Q9NZU7 370 aa13.28□□□□□ -0.28
ATG3-203ENST00000465980 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
ATG3-203ENST00000465980 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
ATG3-203ENST00000465980 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.29
ATG3-203ENST00000465980 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.29
ATG3-203ENST00000465980 EVC2Q86UK5 1308 aa13.27□□□□□ -0.29
ATG3-203ENST00000465980 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.29
ATG3-203ENST00000465980 BLMP54132 1417 aaPredicted RBP13.27□□□□□ -0.29
ATG3-203ENST00000465980 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
ATG3-203ENST00000465980 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
ATG3-203ENST00000465980 USP6P35125 1406 aa13.26□□□□□ -0.29
ATG3-203ENST00000465980 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
ATG3-203ENST00000465980 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
ATG3-203ENST00000465980 CAMTA1Q9Y6Y1 1673 aa13.25□□□□□ -0.29
ATG3-203ENST00000465980 USP19O94966 1318 aa13.25□□□□□ -0.29
ATG3-203ENST00000465980 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
ATG3-203ENST00000465980 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
ATG3-203ENST00000465980 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
ATG3-203ENST00000465980 MON2Q7Z3U7 1717 aa13.25□□□□□ -0.29
ATG3-203ENST00000465980 PDE4AP27815 886 aa13.24□□□□□ -0.29
ATG3-203ENST00000465980 SF3B2Q13435 895 aaKnown RBP13.24□□□□□ -0.29
ATG3-203ENST00000465980 DEFB132Q7Z7B7 95 aa13.24□□□□□ -0.29
ATG3-203ENST00000465980 NLRP13Q86W25 1043 aa13.24□□□□□ -0.29
ATG3-203ENST00000465980 USP35Q9P2H5 1018 aa13.24□□□□□ -0.29
ATG3-203ENST00000465980 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
ATG3-203ENST00000465980 TNS1Q9HBL0 1735 aaKnown RBP13.23□□□□□ -0.29
ATG3-203ENST00000465980 EVA1CP58658 441 aa13.23□□□□□ -0.29
ATG3-203ENST00000465980 CARD11Q9BXL7 1154 aa13.23□□□□□ -0.29
ATG3-203ENST00000465980 SPATA31A1Q5TZJ5 1347 aa13.22□□□□□ -0.29
ATG3-203ENST00000465980 GCP02774 474 aa13.22□□□□□ -0.29
ATG3-203ENST00000465980 SLIT3O75094 1523 aa13.22□□□□□ -0.29
ATG3-203ENST00000465980 BRD4O60885 1362 aaPredicted RBP13.21□□□□□ -0.29
ATG3-203ENST00000465980 CPDO75976 1380 aa13.21□□□□□ -0.29
ATG3-203ENST00000465980 LARP1Q6PKG0 1096 aaKnown RBP13.21□□□□□ -0.29
ATG3-203ENST00000465980 KCNK17Q96T54 332 aa13.21□□□□□ -0.29
ATG3-203ENST00000465980 COL18A1P39060 1754 aa13.2□□□□□ -0.3
ATG3-203ENST00000465980 PLA2G2EQ9NZK7 142 aa13.2□□□□□ -0.3
ATG3-203ENST00000465980 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
ATG3-203ENST00000465980 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
ATG3-203ENST00000465980 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms