RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 PROM2Q8N271 834 aa27.82■■■□□ 2.04
COL2A1-203ENST00000465743 KIF24Q5T7B8 1368 aa27.82■■■□□ 2.04
COL2A1-203ENST00000465743 PPM1GO15355 546 aaPredicted RBP27.81■■■□□ 2.04
COL2A1-203ENST00000465743 TNNT2P45379 298 aaPredicted RBP27.8■■■□□ 2.04
COL2A1-203ENST00000465743 NBPF14Q5TI25 921 aa27.78■■■□□ 2.04
COL2A1-203ENST00000465743 CASZ1Q86V15 1759 aa27.78■■■□□ 2.04
COL2A1-203ENST00000465743 KIF7Q2M1P5 1343 aa27.77■■■□□ 2.04
COL2A1-203ENST00000465743 TXNRD1Q16881 649 aa27.76■■■□□ 2.03
COL2A1-203ENST00000465743 PAPPAQ13219 1627 aa27.76■■■□□ 2.03
COL2A1-203ENST00000465743 PKD1L3Q7Z443 1732 aa27.75■■■□□ 2.03
COL2A1-203ENST00000465743 ZCRB1Q8TBF4 217 aaKnown RBP27.75■■■□□ 2.03
COL2A1-203ENST00000465743 POLKQ9UBT6 870 aa27.75■■■□□ 2.03
COL2A1-203ENST00000465743 NCAPD2Q15021 1401 aa27.74■■■□□ 2.03
COL2A1-203ENST00000465743 RAPGEF4Q8WZA2 1011 aa27.73■■■□□ 2.03
COL2A1-203ENST00000465743 TOGARAM1Q9Y4F4 1720 aa27.72■■■□□ 2.03
COL2A1-203ENST00000465743 NSD2O96028 1365 aa27.72■■■□□ 2.03
COL2A1-203ENST00000465743 WASHC2AQ641Q2 1341 aa27.71■■■□□ 2.03
COL2A1-203ENST00000465743 TATP17735 454 aaPredicted RBP27.7■■■□□ 2.02
COL2A1-203ENST00000465743 PDGFDQ9GZP0 370 aaPredicted RBP27.7■■■□□ 2.02
COL2A1-203ENST00000465743 SYTL4Q96C24 671 aaPredicted RBP27.69■■■□□ 2.02
COL2A1-203ENST00000465743 LY75O60449 1722 aa27.68■■■□□ 2.02
COL2A1-203ENST00000465743 PRIM1P49642 420 aaKnown RBP27.67■■■□□ 2.02
COL2A1-203ENST00000465743 EYA1Q99502 592 aa27.66■■■□□ 2.02
COL2A1-203ENST00000465743 EIF4A2Q14240 407 aaKnown RBP27.65■■■□□ 2.02
COL2A1-203ENST00000465743 PCDH11XQ9BZA7 1347 aa27.65■■■□□ 2.02
COL2A1-203ENST00000465743 PCDH11YQ9BZA8 1340 aa27.65■■■□□ 2.02
COL2A1-203ENST00000465743 TUBGCP6Q96RT7 1819 aa27.64■■■□□ 2.02
COL2A1-203ENST00000465743 LRRC4BQ9NT99 713 aa27.64■■■□□ 2.02
COL2A1-203ENST00000465743 ITGB4P16144 1822 aa27.64■■■□□ 2.01
COL2A1-203ENST00000465743 KNSTRNQ9Y448 316 aa27.63■■■□□ 2.01
COL2A1-203ENST00000465743 CYP27B1O15528 508 aa27.62■■■□□ 2.01
COL2A1-203ENST00000465743 KCNQ4P56696 695 aa27.62■■■□□ 2.01
COL2A1-203ENST00000465743 MORC1Q86VD1 984 aa27.62■■■□□ 2.01
COL2A1-203ENST00000465743 STK32BQ9NY57 414 aa27.62■■■□□ 2.01
COL2A1-203ENST00000465743 ZNF827Q17R98 1081 aa27.61■■■□□ 2.01
COL2A1-203ENST00000465743 SLC15A2Q16348 729 aa27.6■■■□□ 2.01
COL2A1-203ENST00000465743 AMER1Q5JTC6 1135 aaPredicted RBP27.6■■■□□ 2.01
COL2A1-203ENST00000465743 ZBTB7AO95365 584 aa27.57■■■□□ 2
COL2A1-203ENST00000465743 SPON1Q9HCB6 807 aa27.56■■■□□ 2
COL2A1-203ENST00000465743 IGSF1Q8N6C5 1336 aa27.56■■■□□ 2
COL2A1-203ENST00000465743 QSER1Q2KHR3 1735 aa27.54■■■□□ 2
COL2A1-203ENST00000465743 C5P01031 1676 aa27.52■■■□□ 2
COL2A1-203ENST00000465743 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
COL2A1-203ENST00000465743 PER1O15534 1290 aaPredicted RBP27.51■■□□□ 1.99
COL2A1-203ENST00000465743 SLC27A3Q5K4L6 730 aa27.51■■□□□ 1.99
COL2A1-203ENST00000465743 CC2D1BQ5T0F9 858 aaKnown RBP27.51■■□□□ 1.99
COL2A1-203ENST00000465743 AEBP1Q8IUX7 1158 aa27.51■■□□□ 1.99
COL2A1-203ENST00000465743 SPG7Q9UQ90 795 aa27.51■■□□□ 1.99
COL2A1-203ENST00000465743 ATF5Q9Y2D1 282 aaPredicted RBP27.51■■□□□ 1.99
COL2A1-203ENST00000465743 TAF1LQ8IZX4 1826 aa27.51■■□□□ 1.99
COL2A1-203ENST00000465743 MPRIPQ6WCQ1 1025 aa27.5■■□□□ 1.99
COL2A1-203ENST00000465743 AKT1S1Q96B36 256 aa27.5■■□□□ 1.99
COL2A1-203ENST00000465743 CNGB1Q14028 1251 aaPredicted RBP27.49■■□□□ 1.99
COL2A1-203ENST00000465743 PPP1R1BQ9UD71 204 aaPredicted RBP27.49■■□□□ 1.99
COL2A1-203ENST00000465743 CCNL1Q9UK58 526 aaPredicted RBP27.48■■□□□ 1.99
COL2A1-203ENST00000465743 PALLDQ8WX93 1383 aa27.48■■□□□ 1.99
COL2A1-203ENST00000465743 PTGER2P43116 358 aa27.47■■□□□ 1.99
COL2A1-203ENST00000465743 PHKG2P15735 406 aa27.46■■□□□ 1.99
COL2A1-203ENST00000465743 NKX1-1Q15270 411 aaPredicted RBP27.45■■□□□ 1.98
COL2A1-203ENST00000465743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.98
COL2A1-203ENST00000465743 PNPLA7Q6ZV29 1317 aa27.44■■□□□ 1.98
COL2A1-203ENST00000465743 PIGBQ92521 554 aa27.43■■□□□ 1.98
COL2A1-203ENST00000465743 IL13P35225 146 aa27.42■■□□□ 1.98
COL2A1-203ENST00000465743 MTHFSP49914 203 aa27.42■■□□□ 1.98
COL2A1-203ENST00000465743 IFNL2Q8IZJ0 200 aa27.42■■□□□ 1.98
COL2A1-203ENST00000465743 MTFR1LQ9H019 292 aa27.42■■□□□ 1.98
COL2A1-203ENST00000465743 PLEKHG2Q9H7P9 1386 aa27.4■■□□□ 1.98
COL2A1-203ENST00000465743 SGIP1Q9BQI5 828 aa27.4■■□□□ 1.98
COL2A1-203ENST00000465743 TFCP2L1Q9NZI6 479 aa27.4■■□□□ 1.98
COL2A1-203ENST00000465743 C4BP0C0L5 1744 aa27.4■■□□□ 1.98
COL2A1-203ENST00000465743 KDM6AO15550 1401 aaPredicted RBP27.4■■□□□ 1.98
COL2A1-203ENST00000465743 KDRP35968 1356 aa27.39■■□□□ 1.98
COL2A1-203ENST00000465743 SULT6B1Q6IMI4 303 aa27.39■■□□□ 1.98
COL2A1-203ENST00000465743 COL24A1Q17RW2 1714 aa27.38■■□□□ 1.97
COL2A1-203ENST00000465743 ZNF530Q6P9A1 599 aaPredicted RBP27.38■■□□□ 1.97
COL2A1-203ENST00000465743 COL3A1P02461 1466 aaPredicted RBP27.38■■□□□ 1.97
COL2A1-203ENST00000465743 NPC1L1Q9UHC9 1359 aa27.37■■□□□ 1.97
COL2A1-203ENST00000465743 TMOD3Q9NYL9 352 aa27.37■■□□□ 1.97
COL2A1-203ENST00000465743 PLEKHO1Q53GL0 409 aaPredicted RBP27.35■■□□□ 1.97
COL2A1-203ENST00000465743 ASAP1Q9ULH1 1129 aa27.35■■□□□ 1.97
COL2A1-203ENST00000465743 UBR3Q6ZT12 1888 aa27.35■■□□□ 1.97
COL2A1-203ENST00000465743 VIRMAQ69YN4 1812 aaKnown RBP27.34■■□□□ 1.97
COL2A1-203ENST00000465743 SMARCC1Q92922 1105 aaPredicted RBP27.33■■□□□ 1.97
COL2A1-203ENST00000465743 SCN11AQ9UI33 1791 aa27.32■■□□□ 1.96
COL2A1-203ENST00000465743 HMOX1P09601 288 aa27.32■■□□□ 1.96
COL2A1-203ENST00000465743 AMIGO3Q86WK7 504 aa27.31■■□□□ 1.96
COL2A1-203ENST00000465743 FHDC1Q9C0D6 1143 aaPredicted RBP27.31■■□□□ 1.96
COL2A1-203ENST00000465743 COL23A1Q86Y22 540 aaPredicted RBP27.3■■□□□ 1.96
COL2A1-203ENST00000465743 ATG3Q9NT62 314 aa27.3■■□□□ 1.96
COL2A1-203ENST00000465743 LOC102724428A0A0B4J2F2 783 aa27.29■■□□□ 1.96
COL2A1-203ENST00000465743 SIK1P57059 783 aa27.29■■□□□ 1.96
COL2A1-203ENST00000465743 AMOTQ4VCS5 1084 aa27.29■■□□□ 1.96
COL2A1-203ENST00000465743 SMIM5Q71RC9 77 aa27.29■■□□□ 1.96
COL2A1-203ENST00000465743 UTRNP46939 3433 aa27.29■■□□□ 1.96
COL2A1-203ENST00000465743 MSH5O43196 834 aa27.28■■□□□ 1.96
COL2A1-203ENST00000465743 LINC00116Q8NCU8 138 aa27.28■■□□□ 1.96
COL2A1-203ENST00000465743 DCAF5Q96JK2 942 aa27.28■■□□□ 1.96
COL2A1-203ENST00000465743 DIAPH1O60610 1272 aaKnown RBP27.27■■□□□ 1.96
COL2A1-203ENST00000465743 ITPK1Q13572 414 aa27.27■■□□□ 1.96
COL2A1-203ENST00000465743 ARXQ96QS3 562 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms