RNA–Protein interactions for RNA: ENST00000465724.1

C4A-247, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 964 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-247ENST00000465724 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
C4A-247ENST00000465724 RGPD1P0DJD0 1748 aa23.3■■□□□ 1.32
C4A-247ENST00000465724 SPG7Q9UQ90 795 aa23.3■■□□□ 1.32
C4A-247ENST00000465724 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
C4A-247ENST00000465724 BCL9O00512 1426 aa23.29■■□□□ 1.32
C4A-247ENST00000465724 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
C4A-247ENST00000465724 ACSBG1Q96GR2 724 aa23.28■■□□□ 1.32
C4A-247ENST00000465724 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
C4A-247ENST00000465724 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
C4A-247ENST00000465724 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
C4A-247ENST00000465724 EN1Q05925 392 aaPredicted RBP23.26■■□□□ 1.31
C4A-247ENST00000465724 RALBP1Q15311 655 aa23.26■■□□□ 1.31
C4A-247ENST00000465724 PARD3Q8TEW0 1356 aa23.26■■□□□ 1.31
C4A-247ENST00000465724 U2SURPO15042 1029 aaKnown RBP23.25■■□□□ 1.31
C4A-247ENST00000465724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
C4A-247ENST00000465724 AEBP1Q8IUX7 1158 aa23.24■■□□□ 1.31
C4A-247ENST00000465724 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
C4A-247ENST00000465724 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
C4A-247ENST00000465724 KCNQ2O43526 872 aa23.22■■□□□ 1.31
C4A-247ENST00000465724 HMOX1P09601 288 aa23.22■■□□□ 1.31
C4A-247ENST00000465724 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
C4A-247ENST00000465724 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
C4A-247ENST00000465724 TNS1Q9HBL0 1735 aaKnown RBP23.22■■□□□ 1.31
C4A-247ENST00000465724 CYP27B1O15528 508 aa23.21■■□□□ 1.31
C4A-247ENST00000465724 SBF2Q86WG5 1849 aa23.21■■□□□ 1.31
C4A-247ENST00000465724 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
C4A-247ENST00000465724 EZH2Q15910 746 aaKnown RBP23.2■■□□□ 1.3
C4A-247ENST00000465724 PTF1AQ7RTS3 328 aa23.2■■□□□ 1.3
C4A-247ENST00000465724 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
C4A-247ENST00000465724 COL3A1P02461 1466 aaPredicted RBP23.19■■□□□ 1.3
C4A-247ENST00000465724 KDRP35968 1356 aa23.19■■□□□ 1.3
C4A-247ENST00000465724 PRIM1P49642 420 aaKnown RBP23.19■■□□□ 1.3
C4A-247ENST00000465724 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
C4A-247ENST00000465724 CAMKK2Q96RR4 588 aa23.18■■□□□ 1.3
C4A-247ENST00000465724 PKD1L3Q7Z443 1732 aa23.18■■□□□ 1.3
C4A-247ENST00000465724 KAT6BQ8WYB5 2073 aa23.18■■□□□ 1.3
C4A-247ENST00000465724 PLSCR1O15162 318 aa23.17■■□□□ 1.3
C4A-247ENST00000465724 PHKG2P15735 406 aa23.17■■□□□ 1.3
C4A-247ENST00000465724 ZNF530Q6P9A1 599 aaPredicted RBP23.16■■□□□ 1.3
C4A-247ENST00000465724 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
C4A-247ENST00000465724 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
C4A-247ENST00000465724 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
C4A-247ENST00000465724 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
C4A-247ENST00000465724 C1orf141Q5JVX7 400 aa23.15■■□□□ 1.3
C4A-247ENST00000465724 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
C4A-247ENST00000465724 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
C4A-247ENST00000465724 PRKRIP1Q9H875 184 aaPredicted RBP23.12■■□□□ 1.29
C4A-247ENST00000465724 DOT1LQ8TEK3 1739 aa23.11■■□□□ 1.29
C4A-247ENST00000465724 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
C4A-247ENST00000465724 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
C4A-247ENST00000465724 PRKAR2BP31323 418 aa23.08■■□□□ 1.29
C4A-247ENST00000465724 TXNRD1Q16881 649 aa23.08■■□□□ 1.29
C4A-247ENST00000465724 AKAP4Q5JQC9 854 aa23.08■■□□□ 1.29
C4A-247ENST00000465724 NBPF14Q5TI25 921 aa23.08■■□□□ 1.29
C4A-247ENST00000465724 BTAF1O14981 1849 aa23.08■■□□□ 1.28
C4A-247ENST00000465724 FCHSD2O94868 740 aa23.07■■□□□ 1.28
C4A-247ENST00000465724 MTHFSDQ2M296 383 aaKnown RBP23.07■■□□□ 1.28
C4A-247ENST00000465724 RSPH6AQ9H0K4 717 aa23.07■■□□□ 1.28
C4A-247ENST00000465724 TMOD3Q9NYL9 352 aa23.07■■□□□ 1.28
C4A-247ENST00000465724 NEFMP07197 916 aa23.05■■□□□ 1.28
C4A-247ENST00000465724 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
C4A-247ENST00000465724 RGPD3A6NKT7 1758 aaPredicted RBP23.04■■□□□ 1.28
C4A-247ENST00000465724 RGPD4Q7Z3J3 1758 aa23.04■■□□□ 1.28
C4A-247ENST00000465724 ERVV-2B6SEH9 535 aa23.04■■□□□ 1.28
C4A-247ENST00000465724 ANP32CO43423 234 aa23.04■■□□□ 1.28
C4A-247ENST00000465724 PROM2Q8N271 834 aa23.04■■□□□ 1.28
C4A-247ENST00000465724 PIGBQ92521 554 aa23.04■■□□□ 1.28
C4A-247ENST00000465724 CABP4P57796 275 aa23.03■■□□□ 1.28
C4A-247ENST00000465724 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
C4A-247ENST00000465724 SMARCC1Q92922 1105 aaPredicted RBP23.02■■□□□ 1.28
C4A-247ENST00000465724 RREB1Q92766 1687 aa23.02■■□□□ 1.28
C4A-247ENST00000465724 SLC27A3Q5K4L6 730 aa23.01■■□□□ 1.27
C4A-247ENST00000465724 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
C4A-247ENST00000465724 TOGARAM1Q9Y4F4 1720 aa23.01■■□□□ 1.27
C4A-247ENST00000465724 PSDA5PKW4 1024 aaPredicted RBP23■■□□□ 1.27
C4A-247ENST00000465724 KDM6AO15550 1401 aaPredicted RBP22.99■■□□□ 1.27
C4A-247ENST00000465724 ITGB4P16144 1822 aa22.99■■□□□ 1.27
C4A-247ENST00000465724 R3HDM1Q15032 1099 aaKnown RBP22.99■■□□□ 1.27
C4A-247ENST00000465724 WDR43Q15061 677 aaKnown RBP eCLIP22.99■■□□□ 1.27
C4A-247ENST00000465724 GNAT3A8MTJ3 354 aa22.98■■□□□ 1.27
C4A-247ENST00000465724 RNMTO43148 476 aaKnown RBP22.98■■□□□ 1.27
C4A-247ENST00000465724 CCNL1Q9UK58 526 aaPredicted RBP22.98■■□□□ 1.27
C4A-247ENST00000465724 NUP188Q5SRE5 1749 aa22.98■■□□□ 1.27
C4A-247ENST00000465724 PALLDQ8WX93 1383 aa22.98■■□□□ 1.27
C4A-247ENST00000465724 NFATC2IPQ8NCF5 419 aa22.97■■□□□ 1.27
C4A-247ENST00000465724 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
C4A-247ENST00000465724 STK32BQ9NY57 414 aa22.97■■□□□ 1.27
C4A-247ENST00000465724 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
C4A-247ENST00000465724 ASAP1Q9ULH1 1129 aa22.96■■□□□ 1.27
C4A-247ENST00000465724 MAPK8IP3Q9UPT6 1336 aa22.96■■□□□ 1.27
C4A-247ENST00000465724 MAP3K5Q99683 1374 aa22.96■■□□□ 1.27
C4A-247ENST00000465724 HMGB2P26583 209 aaKnown RBP22.95■■□□□ 1.26
C4A-247ENST00000465724 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.26
C4A-247ENST00000465724 KCNQ4P56696 695 aa22.94■■□□□ 1.26
C4A-247ENST00000465724 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
C4A-247ENST00000465724 ATG3Q9NT62 314 aa22.94■■□□□ 1.26
C4A-247ENST00000465724 ANO8Q9HCE9 1232 aaPredicted RBP22.93■■□□□ 1.26
C4A-247ENST00000465724 TEFQ10587 303 aa22.92■■□□□ 1.26
C4A-247ENST00000465724 SLC15A2Q16348 729 aa22.92■■□□□ 1.26
C4A-247ENST00000465724 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms