RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 ANKRD36BQ8N2N9 1353 aa14.6□□□□□ -0.07
GPNMB-206ENST00000465673 RRS1Q15050 365 aaKnown RBP14.59□□□□□ -0.07
GPNMB-206ENST00000465673 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
GPNMB-206ENST00000465673 ZCRB1Q8TBF4 217 aaKnown RBP14.59□□□□□ -0.07
GPNMB-206ENST00000465673 COG3Q96JB2 828 aa14.59□□□□□ -0.07
GPNMB-206ENST00000465673 TESK2Q96S53 571 aa14.59□□□□□ -0.07
GPNMB-206ENST00000465673 MEGF6O75095 1541 aa14.59□□□□□ -0.07
GPNMB-206ENST00000465673 RGPD2P0DJD1 1756 aa14.59□□□□□ -0.07
GPNMB-206ENST00000465673 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
GPNMB-206ENST00000465673 DOT1LQ8TEK3 1739 aa14.58□□□□□ -0.07
GPNMB-206ENST00000465673 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.08
GPNMB-206ENST00000465673 MSH5O43196 834 aa14.58□□□□□ -0.08
GPNMB-206ENST00000465673 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
GPNMB-206ENST00000465673 MSL1Q68DK7 614 aa14.58□□□□□ -0.08
GPNMB-206ENST00000465673 COL23A1Q86Y22 540 aaPredicted RBP14.58□□□□□ -0.08
GPNMB-206ENST00000465673 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
GPNMB-206ENST00000465673 CCNL1Q9UK58 526 aaPredicted RBP14.58□□□□□ -0.08
GPNMB-206ENST00000465673 FAM208AQ9UK61 1670 aaKnown RBP14.58□□□□□ -0.08
GPNMB-206ENST00000465673 GOLGB1Q14789 3259 aaKnown RBP14.57□□□□□ -0.08
GPNMB-206ENST00000465673 YBX3P16989 372 aaKnown RBP eCLIP14.57□□□□□ -0.08
GPNMB-206ENST00000465673 SHANK3Q9BYB0 1731 aa14.56□□□□□ -0.08
GPNMB-206ENST00000465673 PUS7Q96PZ0 661 aaKnown RBP14.56□□□□□ -0.08
GPNMB-206ENST00000465673 QSER1Q2KHR3 1735 aa14.55□□□□□ -0.08
GPNMB-206ENST00000465673 GGNBP2Q9H3C7 697 aa14.55□□□□□ -0.08
GPNMB-206ENST00000465673 LY75O60449 1722 aa14.55□□□□□ -0.08
GPNMB-206ENST00000465673 COL24A1Q17RW2 1714 aa14.55□□□□□ -0.08
GPNMB-206ENST00000465673 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
GPNMB-206ENST00000465673 USP47Q96K76 1375 aa14.53□□□□□ -0.08
GPNMB-206ENST00000465673 FYB1O15117 783 aa14.53□□□□□ -0.08
GPNMB-206ENST00000465673 GIGYF1O75420 1035 aaPredicted RBP14.53□□□□□ -0.08
GPNMB-206ENST00000465673 SMIM5Q71RC9 77 aa14.53□□□□□ -0.08
GPNMB-206ENST00000465673 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.09
GPNMB-206ENST00000465673 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
GPNMB-206ENST00000465673 RAPGEF4Q8WZA2 1011 aa14.51□□□□□ -0.09
GPNMB-206ENST00000465673 MPRIPQ6WCQ1 1025 aa14.5□□□□□ -0.09
GPNMB-206ENST00000465673 WWC3Q9ULE0 1092 aa14.5□□□□□ -0.09
GPNMB-206ENST00000465673 TATP17735 454 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-206ENST00000465673 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
GPNMB-206ENST00000465673 CYP27B1O15528 508 aa14.48□□□□□ -0.09
GPNMB-206ENST00000465673 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
GPNMB-206ENST00000465673 PALLDQ8WX93 1383 aa14.47□□□□□ -0.09
GPNMB-206ENST00000465673 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
GPNMB-206ENST00000465673 INSRP06213 1382 aa14.46□□□□□ -0.1
GPNMB-206ENST00000465673 C5P01031 1676 aa14.46□□□□□ -0.1
GPNMB-206ENST00000465673 PCDH11XQ9BZA7 1347 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 PCDH11YQ9BZA8 1340 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 PHF14O94880 888 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 SMG6Q86US8 1419 aaKnown RBP14.45□□□□□ -0.1
GPNMB-206ENST00000465673 ZNF526Q8TF50 670 aaPredicted RBP14.45□□□□□ -0.1
GPNMB-206ENST00000465673 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 ATP10DQ9P241 1426 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 CD2APQ9Y5K6 639 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 EMILIN1Q9Y6C2 1016 aa14.45□□□□□ -0.1
GPNMB-206ENST00000465673 TMF1P82094 1093 aa14.44□□□□□ -0.1
GPNMB-206ENST00000465673 IFFO2Q5TF58 517 aa14.44□□□□□ -0.1
GPNMB-206ENST00000465673 PIGBQ92521 554 aa14.44□□□□□ -0.1
GPNMB-206ENST00000465673 TOGARAM1Q9Y4F4 1720 aa14.44□□□□□ -0.1
GPNMB-206ENST00000465673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.42□□□□□ -0.1
GPNMB-206ENST00000465673 PPM1GO15355 546 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-206ENST00000465673 FLAD1Q8NFF5 587 aa14.42□□□□□ -0.1
GPNMB-206ENST00000465673 AK7Q96M32 723 aa14.42□□□□□ -0.1
GPNMB-206ENST00000465673 TAF1LQ8IZX4 1826 aa14.42□□□□□ -0.1
GPNMB-206ENST00000465673 FLT4P35916 1363 aa14.42□□□□□ -0.1
GPNMB-206ENST00000465673 CEP350Q5VT06 3117 aa14.42□□□□□ -0.1
GPNMB-206ENST00000465673 C4BP0C0L5 1744 aa14.41□□□□□ -0.1
GPNMB-206ENST00000465673 LINC00116Q8NCU8 138 aa14.41□□□□□ -0.1
GPNMB-206ENST00000465673 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
GPNMB-206ENST00000465673 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
GPNMB-206ENST00000465673 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
GPNMB-206ENST00000465673 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
GPNMB-206ENST00000465673 ASAP1Q9ULH1 1129 aa14.4□□□□□ -0.1
GPNMB-206ENST00000465673 ITGB4P16144 1822 aa14.4□□□□□ -0.1
GPNMB-206ENST00000465673 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
GPNMB-206ENST00000465673 SIK1P57059 783 aa14.39□□□□□ -0.11
GPNMB-206ENST00000465673 ITPK1Q13572 414 aa14.39□□□□□ -0.11
GPNMB-206ENST00000465673 KIF20BQ96Q89 1820 aa14.38□□□□□ -0.11
GPNMB-206ENST00000465673 ADCY9O60503 1353 aa14.38□□□□□ -0.11
GPNMB-206ENST00000465673 NKX1-1Q15270 411 aaPredicted RBP14.38□□□□□ -0.11
GPNMB-206ENST00000465673 EYA1Q99502 592 aa14.38□□□□□ -0.11
GPNMB-206ENST00000465673 NSD3Q9BZ95 1437 aa14.38□□□□□ -0.11
GPNMB-206ENST00000465673 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
GPNMB-206ENST00000465673 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
GPNMB-206ENST00000465673 PKD1L3Q7Z443 1732 aa14.36□□□□□ -0.11
GPNMB-206ENST00000465673 GNPATO15228 680 aa14.36□□□□□ -0.11
GPNMB-206ENST00000465673 TMOD3Q9NYL9 352 aa14.36□□□□□ -0.11
GPNMB-206ENST00000465673 SPG7Q9UQ90 795 aa14.36□□□□□ -0.11
GPNMB-206ENST00000465673 MAP2P11137 1827 aaKnown RBP14.36□□□□□ -0.11
GPNMB-206ENST00000465673 NCAPD2Q15021 1401 aa14.35□□□□□ -0.11
GPNMB-206ENST00000465673 SSFA2P28290 1259 aa14.35□□□□□ -0.11
GPNMB-206ENST00000465673 ATP6V1AP38606 617 aa14.35□□□□□ -0.11
GPNMB-206ENST00000465673 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
GPNMB-206ENST00000465673 MMP10P09238 476 aa14.34□□□□□ -0.11
GPNMB-206ENST00000465673 PHKG2P15735 406 aa14.34□□□□□ -0.11
GPNMB-206ENST00000465673 HSPA6P17066 643 aa14.34□□□□□ -0.11
GPNMB-206ENST00000465673 POLKQ9UBT6 870 aa14.34□□□□□ -0.11
GPNMB-206ENST00000465673 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
GPNMB-206ENST00000465673 TNNT2P45379 298 aaPredicted RBP14.33□□□□□ -0.12
GPNMB-206ENST00000465673 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
GPNMB-206ENST00000465673 SLC4A9Q96Q91 983 aa14.33□□□□□ -0.12
GPNMB-206ENST00000465673 KIF3CO14782 793 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms