RNA–Protein interactions for RNA: ENST00000465590.1

SKIL-205, Transcript of SKI like proto-oncogene, humanhuman

TSL 1 (best)

Gene SKIL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-205ENST00000465590 SULT6B1Q6IMI4 303 aa32.15■■■□□ 2.74
SKIL-205ENST00000465590 DDX54Q8TDD1 881 aaKnown RBP32.15■■■□□ 2.74
SKIL-205ENST00000465590 PRKRIP1Q9H875 184 aaPredicted RBP32.15■■■□□ 2.74
SKIL-205ENST00000465590 MYBBP1AQ9BQG0 1328 aaKnown RBP32.14■■■□□ 2.74
SKIL-205ENST00000465590 PLEKHG2Q9H7P9 1386 aa32.14■■■□□ 2.74
SKIL-205ENST00000465590 KDRP35968 1356 aa32.13■■■□□ 2.73
SKIL-205ENST00000465590 NUDCQ9Y266 331 aa32.13■■■□□ 2.73
SKIL-205ENST00000465590 BCL9O00512 1426 aa32.12■■■□□ 2.73
SKIL-205ENST00000465590 AEBP1Q8IUX7 1158 aa32.12■■■□□ 2.73
SKIL-205ENST00000465590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.12■■■□□ 2.73
SKIL-205ENST00000465590 SPG7Q9UQ90 795 aa32.12■■■□□ 2.73
SKIL-205ENST00000465590 U2SURPO15042 1029 aaKnown RBP32.11■■■□□ 2.73
SKIL-205ENST00000465590 PCDH11XQ9BZA7 1347 aa32.1■■■□□ 2.73
SKIL-205ENST00000465590 PCDH11YQ9BZA8 1340 aa32.1■■■□□ 2.73
SKIL-205ENST00000465590 SF3B2Q13435 895 aaKnown RBP32.1■■■□□ 2.73
SKIL-205ENST00000465590 PKD1L3Q7Z443 1732 aa32.09■■■□□ 2.73
SKIL-205ENST00000465590 SHANK3Q9BYB0 1731 aa32.09■■■□□ 2.73
SKIL-205ENST00000465590 TRIM37O94972 964 aa32.07■■■□□ 2.72
SKIL-205ENST00000465590 HMOX1P09601 288 aa32.07■■■□□ 2.72
SKIL-205ENST00000465590 AMOTQ4VCS5 1084 aa32.05■■■□□ 2.72
SKIL-205ENST00000465590 PLEKHO1Q53GL0 409 aaPredicted RBP32.05■■■□□ 2.72
SKIL-205ENST00000465590 SBF2Q86WG5 1849 aa32.03■■■□□ 2.72
SKIL-205ENST00000465590 CYP27B1O15528 508 aa32.02■■■□□ 2.72
SKIL-205ENST00000465590 ANP32CO43423 234 aa32.01■■■□□ 2.71
SKIL-205ENST00000465590 U2AF1L5P0DN76 240 aaPredicted RBP32.01■■■□□ 2.71
SKIL-205ENST00000465590 U2AF1Q01081 240 aaKnown RBP eCLIP32.01■■■□□ 2.71
SKIL-205ENST00000465590 BCL11BQ9C0K0 894 aaPredicted RBP32■■■□□ 2.71
SKIL-205ENST00000465590 IFNL2Q8IZJ0 200 aa31.99■■■□□ 2.71
SKIL-205ENST00000465590 BAG6P46379 1132 aa31.98■■■□□ 2.71
SKIL-205ENST00000465590 ACSBG1Q96GR2 724 aa31.98■■■□□ 2.71
SKIL-205ENST00000465590 TNS1Q9HBL0 1735 aaKnown RBP31.97■■■□□ 2.71
SKIL-205ENST00000465590 PHKG2P15735 406 aa31.96■■■□□ 2.71
SKIL-205ENST00000465590 ZNF530Q6P9A1 599 aaPredicted RBP31.96■■■□□ 2.71
SKIL-205ENST00000465590 FCHSD2O94868 740 aa31.95■■■□□ 2.71
SKIL-205ENST00000465590 APBA3O96018 575 aa31.95■■■□□ 2.71
SKIL-205ENST00000465590 NKX1-1Q15270 411 aaPredicted RBP31.95■■■□□ 2.71
SKIL-205ENST00000465590 KCNQ2O43526 872 aa31.94■■■□□ 2.7
SKIL-205ENST00000465590 RSPH6AQ9H0K4 717 aa31.94■■■□□ 2.7
SKIL-205ENST00000465590 NHSQ6T4R5 1651 aa31.94■■■□□ 2.7
SKIL-205ENST00000465590 KAT6BQ8WYB5 2073 aa31.94■■■□□ 2.7
SKIL-205ENST00000465590 HSP90AB1P08238 724 aaKnown RBP31.92■■■□□ 2.7
SKIL-205ENST00000465590 C1orf141Q5JVX7 400 aa31.92■■■□□ 2.7
SKIL-205ENST00000465590 DEFB132Q7Z7B7 95 aa31.92■■■□□ 2.7
SKIL-205ENST00000465590 PRKAR2BP31323 418 aa31.91■■■□□ 2.7
SKIL-205ENST00000465590 PTF1AQ7RTS3 328 aa31.91■■■□□ 2.7
SKIL-205ENST00000465590 DOT1LQ8TEK3 1739 aa31.91■■■□□ 2.7
SKIL-205ENST00000465590 PRIM1P49642 420 aaKnown RBP31.9■■■□□ 2.7
SKIL-205ENST00000465590 SYTL4Q96C24 671 aaPredicted RBP31.9■■■□□ 2.7
SKIL-205ENST00000465590 EN1Q05925 392 aaPredicted RBP31.88■■■□□ 2.69
SKIL-205ENST00000465590 MTHFSDQ2M296 383 aaKnown RBP31.87■■■□□ 2.69
SKIL-205ENST00000465590 DCAF5Q96JK2 942 aa31.87■■■□□ 2.69
SKIL-205ENST00000465590 AKAP4Q5JQC9 854 aa31.86■■■□□ 2.69
SKIL-205ENST00000465590 PNNQ9H307 717 aaKnown RBP31.86■■■□□ 2.69
SKIL-205ENST00000465590 PLSCR1O15162 318 aa31.85■■■□□ 2.69
SKIL-205ENST00000465590 GAS2L2Q8NHY3 880 aa31.85■■■□□ 2.69
SKIL-205ENST00000465590 NEFMP07197 916 aa31.84■■■□□ 2.69
SKIL-205ENST00000465590 WDR43Q15061 677 aaKnown RBP eCLIP31.84■■■□□ 2.69
SKIL-205ENST00000465590 PHACTR3Q96KR7 559 aa31.83■■■□□ 2.69
SKIL-205ENST00000465590 CAMKK2Q96RR4 588 aa31.83■■■□□ 2.69
SKIL-205ENST00000465590 BTAF1O14981 1849 aa31.82■■■□□ 2.68
SKIL-205ENST00000465590 TOGARAM1Q9Y4F4 1720 aa31.82■■■□□ 2.68
SKIL-205ENST00000465590 EZH2Q15910 746 aaKnown RBP31.81■■■□□ 2.68
SKIL-205ENST00000465590 ERVV-2B6SEH9 535 aa31.8■■■□□ 2.68
SKIL-205ENST00000465590 MPRIPQ6WCQ1 1025 aa31.8■■■□□ 2.68
SKIL-205ENST00000465590 RGPD3A6NKT7 1758 aaPredicted RBP31.79■■■□□ 2.68
SKIL-205ENST00000465590 RGPD4Q7Z3J3 1758 aa31.79■■■□□ 2.68
SKIL-205ENST00000465590 KDM6AO15550 1401 aaPredicted RBP31.78■■■□□ 2.68
SKIL-205ENST00000465590 TMOD3Q9NYL9 352 aa31.78■■■□□ 2.68
SKIL-205ENST00000465590 ITGB4P16144 1822 aa31.77■■■□□ 2.68
SKIL-205ENST00000465590 PLEKHF1Q96S99 279 aa31.77■■■□□ 2.68
SKIL-205ENST00000465590 GNAT3A8MTJ3 354 aa31.76■■■□□ 2.67
SKIL-205ENST00000465590 PIGBQ92521 554 aa31.75■■■□□ 2.67
SKIL-205ENST00000465590 MAP3K5Q99683 1374 aa31.75■■■□□ 2.67
SKIL-205ENST00000465590 MAPK8IP3Q9UPT6 1336 aa31.75■■■□□ 2.67
SKIL-205ENST00000465590 CABP4P57796 275 aa31.74■■■□□ 2.67
SKIL-205ENST00000465590 CCDC184Q52MB2 194 aa31.74■■■□□ 2.67
SKIL-205ENST00000465590 RNMTO43148 476 aaKnown RBP31.73■■■□□ 2.67
SKIL-205ENST00000465590 MRS2Q9HD23 443 aa31.73■■■□□ 2.67
SKIL-205ENST00000465590 ADAMTS8Q9UP79 889 aa31.73■■■□□ 2.67
SKIL-205ENST00000465590 SCN11AQ9UI33 1791 aa31.73■■■□□ 2.67
SKIL-205ENST00000465590 LGR6Q9HBX8 967 aa31.71■■■□□ 2.67
SKIL-205ENST00000465590 RREB1Q92766 1687 aa31.7■■■□□ 2.67
SKIL-205ENST00000465590 TXNRD1Q16881 649 aa31.7■■■□□ 2.67
SKIL-205ENST00000465590 SMARCC1Q92922 1105 aaPredicted RBP31.7■■■□□ 2.67
SKIL-205ENST00000465590 PROM2Q8N271 834 aa31.69■■■□□ 2.66
SKIL-205ENST00000465590 ADAMTS7Q9UKP4 1686 aa31.67■■■□□ 2.66
SKIL-205ENST00000465590 NFATC2IPQ8NCF5 419 aa31.67■■■□□ 2.66
SKIL-205ENST00000465590 RTF1Q92541 710 aaKnown RBP31.67■■■□□ 2.66
SKIL-205ENST00000465590 SLC52A2Q9HAB3 445 aa31.67■■■□□ 2.66
SKIL-205ENST00000465590 HTATSF1O43719 755 aaKnown RBP31.66■■■□□ 2.66
SKIL-205ENST00000465590 NFE2L2Q16236 605 aa31.66■■■□□ 2.66
SKIL-205ENST00000465590 DIEXFQ68CQ4 756 aaKnown RBP31.66■■■□□ 2.66
SKIL-205ENST00000465590 RUNDC1Q96C34 613 aa31.66■■■□□ 2.66
SKIL-205ENST00000465590 VIRMAQ69YN4 1812 aaKnown RBP31.65■■■□□ 2.66
SKIL-205ENST00000465590 SLC27A3Q5K4L6 730 aa31.65■■■□□ 2.66
SKIL-205ENST00000465590 CCDC146Q8IYE0 955 aa31.65■■■□□ 2.66
SKIL-205ENST00000465590 IL17REQ8NFR9 667 aa31.65■■■□□ 2.66
SKIL-205ENST00000465590 PALLDQ8WX93 1383 aa31.65■■■□□ 2.66
SKIL-205ENST00000465590 PNISRQ8TF01 805 aaKnown RBP31.64■■■□□ 2.66
SKIL-205ENST00000465590 MRC1P22897 1456 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms