RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
ERGIC3-212ENST00000465298 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
ERGIC3-212ENST00000465298 SF3B2Q13435 895 aaKnown RBP17.59■□□□□ 0.41
ERGIC3-212ENST00000465298 SULT6B1Q6IMI4 303 aa17.59■□□□□ 0.41
ERGIC3-212ENST00000465298 BCL9O00512 1426 aa17.58■□□□□ 0.41
ERGIC3-212ENST00000465298 FCHSD2O94868 740 aa17.58■□□□□ 0.4
ERGIC3-212ENST00000465298 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
ERGIC3-212ENST00000465298 USHBP1Q8N6Y0 703 aa17.58■□□□□ 0.4
ERGIC3-212ENST00000465298 SOCS7O14512 581 aa17.57■□□□□ 0.4
ERGIC3-212ENST00000465298 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
ERGIC3-212ENST00000465298 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
ERGIC3-212ENST00000465298 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
ERGIC3-212ENST00000465298 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
ERGIC3-212ENST00000465298 IFNL2Q8IZJ0 200 aa17.55■□□□□ 0.4
ERGIC3-212ENST00000465298 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
ERGIC3-212ENST00000465298 C1orf141Q5JVX7 400 aa17.54■□□□□ 0.4
ERGIC3-212ENST00000465298 DDX54Q8TDD1 881 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-212ENST00000465298 MEGF6O75095 1541 aa17.53■□□□□ 0.4
ERGIC3-212ENST00000465298 MARCH10Q8NA82 808 aaPredicted RBP17.53■□□□□ 0.4
ERGIC3-212ENST00000465298 LRRC37A3O60309 1634 aa17.52■□□□□ 0.4
ERGIC3-212ENST00000465298 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
ERGIC3-212ENST00000465298 WNK3Q9BYP7 1800 aa17.51■□□□□ 0.39
ERGIC3-212ENST00000465298 HMOX1P09601 288 aa17.51■□□□□ 0.39
ERGIC3-212ENST00000465298 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
ERGIC3-212ENST00000465298 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
ERGIC3-212ENST00000465298 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
ERGIC3-212ENST00000465298 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
ERGIC3-212ENST00000465298 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
ERGIC3-212ENST00000465298 DCAF5Q96JK2 942 aa17.49■□□□□ 0.39
ERGIC3-212ENST00000465298 RGPD1P0DJD0 1748 aa17.49■□□□□ 0.39
ERGIC3-212ENST00000465298 MAPK8IP3Q9UPT6 1336 aa17.48■□□□□ 0.39
ERGIC3-212ENST00000465298 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
ERGIC3-212ENST00000465298 BAG6P46379 1132 aa17.48■□□□□ 0.39
ERGIC3-212ENST00000465298 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
ERGIC3-212ENST00000465298 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
ERGIC3-212ENST00000465298 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
ERGIC3-212ENST00000465298 BRWD3Q6RI45 1802 aa17.47■□□□□ 0.39
ERGIC3-212ENST00000465298 PHKG2P15735 406 aa17.47■□□□□ 0.39
ERGIC3-212ENST00000465298 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
ERGIC3-212ENST00000465298 CYP27B1O15528 508 aa17.46■□□□□ 0.39
ERGIC3-212ENST00000465298 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
ERGIC3-212ENST00000465298 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
ERGIC3-212ENST00000465298 TRIM37O94972 964 aa17.45■□□□□ 0.38
ERGIC3-212ENST00000465298 FAM182BQ5T319 152 aa17.45■□□□□ 0.38
ERGIC3-212ENST00000465298 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
ERGIC3-212ENST00000465298 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
ERGIC3-212ENST00000465298 GNAT3A8MTJ3 354 aa17.43■□□□□ 0.38
ERGIC3-212ENST00000465298 APBA3O96018 575 aa17.43■□□□□ 0.38
ERGIC3-212ENST00000465298 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
ERGIC3-212ENST00000465298 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
ERGIC3-212ENST00000465298 PLSCR1O15162 318 aa17.42■□□□□ 0.38
ERGIC3-212ENST00000465298 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
ERGIC3-212ENST00000465298 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
ERGIC3-212ENST00000465298 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
ERGIC3-212ENST00000465298 SMARCC1Q92922 1105 aaPredicted RBP17.41■□□□□ 0.38
ERGIC3-212ENST00000465298 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
ERGIC3-212ENST00000465298 TMOD3Q9NYL9 352 aa17.41■□□□□ 0.38
ERGIC3-212ENST00000465298 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
ERGIC3-212ENST00000465298 CABP4P57796 275 aa17.4■□□□□ 0.38
ERGIC3-212ENST00000465298 MAP3K5Q99683 1374 aa17.4■□□□□ 0.38
ERGIC3-212ENST00000465298 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
ERGIC3-212ENST00000465298 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
ERGIC3-212ENST00000465298 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
ERGIC3-212ENST00000465298 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
ERGIC3-212ENST00000465298 EP400Q96L91 3159 aa17.38■□□□□ 0.37
ERGIC3-212ENST00000465298 TEFQ10587 303 aa17.37■□□□□ 0.37
ERGIC3-212ENST00000465298 NFE2L2Q16236 605 aa17.37■□□□□ 0.37
ERGIC3-212ENST00000465298 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
ERGIC3-212ENST00000465298 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
ERGIC3-212ENST00000465298 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-212ENST00000465298 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
ERGIC3-212ENST00000465298 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
ERGIC3-212ENST00000465298 KCNQ2O43526 872 aa17.35■□□□□ 0.37
ERGIC3-212ENST00000465298 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-212ENST00000465298 SLC52A2Q9HAB3 445 aa17.35■□□□□ 0.37
ERGIC3-212ENST00000465298 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
ERGIC3-212ENST00000465298 SHANK3Q9BYB0 1731 aa17.33■□□□□ 0.37
ERGIC3-212ENST00000465298 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
ERGIC3-212ENST00000465298 NBPF14Q5TI25 921 aa17.33■□□□□ 0.36
ERGIC3-212ENST00000465298 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 RIPK4P57078 832 aa17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 EN1Q05925 392 aaPredicted RBP17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 PIGBQ92521 554 aa17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 CAMKK2Q96RR4 588 aa17.32■□□□□ 0.36
ERGIC3-212ENST00000465298 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-212ENST00000465298 CEMIPQ8WUJ3 1361 aa17.3■□□□□ 0.36
ERGIC3-212ENST00000465298 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
ERGIC3-212ENST00000465298 DEFB132Q7Z7B7 95 aa17.3■□□□□ 0.36
ERGIC3-212ENST00000465298 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
ERGIC3-212ENST00000465298 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
ERGIC3-212ENST00000465298 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
ERGIC3-212ENST00000465298 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
ERGIC3-212ENST00000465298 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
ERGIC3-212ENST00000465298 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
ERGIC3-212ENST00000465298 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
ERGIC3-212ENST00000465298 RGPD3A6NKT7 1758 aaPredicted RBP17.28■□□□□ 0.36
ERGIC3-212ENST00000465298 RGPD4Q7Z3J3 1758 aa17.28■□□□□ 0.36
ERGIC3-212ENST00000465298 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms