RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 GDF11O95390 407 aa9.25□□□□□ -0.93
VPS8-217ENST00000465213 WHAMMQ8TF30 809 aa9.25□□□□□ -0.93
VPS8-217ENST00000465213 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
VPS8-217ENST00000465213 GJD4Q96KN9 370 aaPredicted RBP9.24□□□□□ -0.93
VPS8-217ENST00000465213 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
VPS8-217ENST00000465213 GPC1P35052 558 aa9.23□□□□□ -0.93
VPS8-217ENST00000465213 SRSF11Q05519 484 aaKnown RBP9.23□□□□□ -0.93
VPS8-217ENST00000465213 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
VPS8-217ENST00000465213 GMCL1Q96IK5 515 aa9.23□□□□□ -0.93
VPS8-217ENST00000465213 CUEDC1Q9NWM3 386 aaPredicted RBP9.23□□□□□ -0.93
VPS8-217ENST00000465213 ADAMTS2O95450 1211 aa9.22□□□□□ -0.93
VPS8-217ENST00000465213 FBXO45P0C2W1 286 aa9.22□□□□□ -0.93
VPS8-217ENST00000465213 GAS6Q14393 721 aa9.22□□□□□ -0.93
VPS8-217ENST00000465213 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
VPS8-217ENST00000465213 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
VPS8-217ENST00000465213 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
VPS8-217ENST00000465213 PCDHB9Q9Y5E1 797 aa9.2□□□□□ -0.94
VPS8-217ENST00000465213 SOCS7O14512 581 aa9.19□□□□□ -0.94
VPS8-217ENST00000465213 MCCD1P59942 119 aaPredicted RBP9.19□□□□□ -0.94
VPS8-217ENST00000465213 SUZ12Q15022 739 aaKnown RBP9.19□□□□□ -0.94
VPS8-217ENST00000465213 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
VPS8-217ENST00000465213 TRIM22Q8IYM9 498 aa9.19□□□□□ -0.94
VPS8-217ENST00000465213 ZNF837Q96EG3 531 aaPredicted RBP9.19□□□□□ -0.94
VPS8-217ENST00000465213 RNF20Q5VTR2 975 aa9.18□□□□□ -0.94
VPS8-217ENST00000465213 CC2D2BQ6DHV5 1058 aa9.18□□□□□ -0.94
VPS8-217ENST00000465213 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
VPS8-217ENST00000465213 LYPD4Q6UWN0 246 aa9.18□□□□□ -0.94
VPS8-217ENST00000465213 DNMT3AQ9Y6K1 912 aaPredicted RBP9.18□□□□□ -0.94
VPS8-217ENST00000465213 RHOQP17081 205 aa9.17□□□□□ -0.94
VPS8-217ENST00000465213 ZNF592Q92610 1267 aa9.17□□□□□ -0.94
VPS8-217ENST00000465213 SCARF2Q96GP6 870 aaPredicted RBP9.17□□□□□ -0.94
VPS8-217ENST00000465213 A0A1W2PRU2 124 aa9.16□□□□□ -0.94
VPS8-217ENST00000465213 CELA2BP08218 269 aaPredicted RBP9.16□□□□□ -0.94
VPS8-217ENST00000465213 IRS1P35568 1242 aa9.16□□□□□ -0.94
VPS8-217ENST00000465213 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
VPS8-217ENST00000465213 DYRK1BQ9Y463 629 aa9.16□□□□□ -0.94
VPS8-217ENST00000465213 MEN1O00255 615 aa9.15□□□□□ -0.94
VPS8-217ENST00000465213 MARSP56192 900 aaKnown RBP9.15□□□□□ -0.94
VPS8-217ENST00000465213 NR1H3Q13133 447 aa9.15□□□□□ -0.94
VPS8-217ENST00000465213 GPR37L1O60883 481 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 MAP3K10Q02779 954 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 CLN3Q13286 438 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 DBN1Q16643 649 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 CYP2U1Q7Z449 544 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 GRIP2Q9C0E4 1043 aa9.14□□□□□ -0.95
VPS8-217ENST00000465213 SPATA31C2B4DYI2 1134 aa9.13□□□□□ -0.95
VPS8-217ENST00000465213 TRAK2O60296 914 aa9.13□□□□□ -0.95
VPS8-217ENST00000465213 IGHA1P01876 353 aa9.13□□□□□ -0.95
VPS8-217ENST00000465213 FOXR1Q6PIV2 292 aa9.13□□□□□ -0.95
VPS8-217ENST00000465213 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
VPS8-217ENST00000465213 H7C1W4 665 aa9.12□□□□□ -0.95
VPS8-217ENST00000465213 SCTRP47872 440 aa9.12□□□□□ -0.95
VPS8-217ENST00000465213 FOXK2Q01167 660 aa9.12□□□□□ -0.95
VPS8-217ENST00000465213 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
VPS8-217ENST00000465213 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
VPS8-217ENST00000465213 NLRP3Q96P20 1036 aa9.11□□□□□ -0.95
VPS8-217ENST00000465213 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
VPS8-217ENST00000465213 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
VPS8-217ENST00000465213 ZNF330Q9Y3S2 320 aaPredicted RBP9.11□□□□□ -0.95
VPS8-217ENST00000465213 IGF1RP08069 1367 aa9.11□□□□□ -0.95
VPS8-217ENST00000465213 POU4F2Q12837 409 aa9.1□□□□□ -0.95
VPS8-217ENST00000465213 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
VPS8-217ENST00000465213 RIPOR1Q6ZS17 1223 aa9.1□□□□□ -0.95
VPS8-217ENST00000465213 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
VPS8-217ENST00000465213 PCDHB11Q9Y5F2 797 aa9.1□□□□□ -0.95
VPS8-217ENST00000465213 GPR25O00155 361 aa9.09□□□□□ -0.95
VPS8-217ENST00000465213 MTMR14Q8NCE2 650 aa9.08□□□□□ -0.96
VPS8-217ENST00000465213 GTPBP3Q969Y2 492 aaKnown RBP9.08□□□□□ -0.96
VPS8-217ENST00000465213 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
VPS8-217ENST00000465213 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
VPS8-217ENST00000465213 NDUFB9Q9Y6M9 179 aa9.08□□□□□ -0.96
VPS8-217ENST00000465213 BCRP11274 1271 aa9.07□□□□□ -0.96
VPS8-217ENST00000465213 GPAT2Q6NUI2 795 aa9.07□□□□□ -0.96
VPS8-217ENST00000465213 TAS1R3Q7RTX0 852 aa9.07□□□□□ -0.96
VPS8-217ENST00000465213 GAS2L1Q99501 681 aaPredicted RBP9.07□□□□□ -0.96
VPS8-217ENST00000465213 APBB1O00213 710 aa9.06□□□□□ -0.96
VPS8-217ENST00000465213 WASLO00401 505 aaPredicted RBP9.06□□□□□ -0.96
VPS8-217ENST00000465213 GNRH1P01148 92 aa9.06□□□□□ -0.96
VPS8-217ENST00000465213 F11P03951 625 aa9.06□□□□□ -0.96
VPS8-217ENST00000465213 ACDQ96AP0 544 aa9.06□□□□□ -0.96
VPS8-217ENST00000465213 TIMMDC1Q9NPL8 285 aa9.06□□□□□ -0.96
VPS8-217ENST00000465213 PHF20L1A8MW92 1017 aa9.05□□□□□ -0.96
VPS8-217ENST00000465213 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
VPS8-217ENST00000465213 NUCKS1Q9H1E3 243 aaKnown RBP9.05□□□□□ -0.96
VPS8-217ENST00000465213 HRH3Q9Y5N1 445 aa9.05□□□□□ -0.96
VPS8-217ENST00000465213 NSFL1CQ9UNZ2 370 aaKnown RBP9.04□□□□□ -0.96
VPS8-217ENST00000465213 IL2RAP01589 272 aa9.03□□□□□ -0.96
VPS8-217ENST00000465213 MX2P20592 715 aa9.03□□□□□ -0.96
VPS8-217ENST00000465213 BEND7Q8N7W2 519 aaPredicted RBP9.03□□□□□ -0.96
VPS8-217ENST00000465213 CNKSR1Q969H4 720 aa9.03□□□□□ -0.96
VPS8-217ENST00000465213 CFHR5Q9BXR6 569 aa9.03□□□□□ -0.96
VPS8-217ENST00000465213 ESF1Q9H501 851 aaKnown RBP9.03□□□□□ -0.96
VPS8-217ENST00000465213 THBS1P07996 1170 aa9.02□□□□□ -0.97
VPS8-217ENST00000465213 CENPCQ03188 943 aa9.02□□□□□ -0.97
VPS8-217ENST00000465213 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
VPS8-217ENST00000465213 CNTNAP5Q8WYK1 1306 aa9.02□□□□□ -0.97
VPS8-217ENST00000465213 PODNQ7Z5L7 613 aa9.01□□□□□ -0.97
VPS8-217ENST00000465213 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
VPS8-217ENST00000465213 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms