RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
XRN1-204ENST00000465074 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
XRN1-204ENST00000465074 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
XRN1-204ENST00000465074 MEGF6O75095 1541 aa16.66■□□□□ 0.26
XRN1-204ENST00000465074 RREB1Q92766 1687 aa16.66■□□□□ 0.26
XRN1-204ENST00000465074 NUP188Q5SRE5 1749 aa16.66■□□□□ 0.26
XRN1-204ENST00000465074 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
XRN1-204ENST00000465074 WASHC2AQ641Q2 1341 aa16.65■□□□□ 0.26
XRN1-204ENST00000465074 PLSCR1O15162 318 aa16.64■□□□□ 0.25
XRN1-204ENST00000465074 NSD2O96028 1365 aa16.64■□□□□ 0.25
XRN1-204ENST00000465074 BCL9O00512 1426 aa16.63■□□□□ 0.25
XRN1-204ENST00000465074 CC2D1BQ5T0F9 858 aaKnown RBP16.63■□□□□ 0.25
XRN1-204ENST00000465074 BTAF1O14981 1849 aa16.63■□□□□ 0.25
XRN1-204ENST00000465074 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
XRN1-204ENST00000465074 EYA1Q99502 592 aa16.62■□□□□ 0.25
XRN1-204ENST00000465074 SHANK3Q9BYB0 1731 aa16.62■□□□□ 0.25
XRN1-204ENST00000465074 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
XRN1-204ENST00000465074 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
XRN1-204ENST00000465074 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
XRN1-204ENST00000465074 RGPD3A6NKT7 1758 aaPredicted RBP16.6■□□□□ 0.25
XRN1-204ENST00000465074 RGPD4Q7Z3J3 1758 aa16.6■□□□□ 0.25
XRN1-204ENST00000465074 PROM2Q8N271 834 aa16.6■□□□□ 0.25
XRN1-204ENST00000465074 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
XRN1-204ENST00000465074 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
XRN1-204ENST00000465074 PCDH11XQ9BZA7 1347 aa16.58■□□□□ 0.24
XRN1-204ENST00000465074 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.24
XRN1-204ENST00000465074 SRCAPQ6ZRS2 3230 aa16.57■□□□□ 0.24
XRN1-204ENST00000465074 PER1O15534 1290 aaPredicted RBP16.56■□□□□ 0.24
XRN1-204ENST00000465074 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
XRN1-204ENST00000465074 STK32BQ9NY57 414 aa16.56■□□□□ 0.24
XRN1-204ENST00000465074 CYP27B1O15528 508 aa16.55■□□□□ 0.24
XRN1-204ENST00000465074 KCNQ4P56696 695 aa16.55■□□□□ 0.24
XRN1-204ENST00000465074 MPRIPQ6WCQ1 1025 aa16.55■□□□□ 0.24
XRN1-204ENST00000465074 MTHFSP49914 203 aa16.54■□□□□ 0.24
XRN1-204ENST00000465074 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
XRN1-204ENST00000465074 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
XRN1-204ENST00000465074 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
XRN1-204ENST00000465074 SULT6B1Q6IMI4 303 aa16.51■□□□□ 0.23
XRN1-204ENST00000465074 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
XRN1-204ENST00000465074 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
XRN1-204ENST00000465074 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
XRN1-204ENST00000465074 LRP5O75197 1615 aa16.51■□□□□ 0.23
XRN1-204ENST00000465074 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
XRN1-204ENST00000465074 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
XRN1-204ENST00000465074 ITGB4P16144 1822 aa16.5■□□□□ 0.23
XRN1-204ENST00000465074 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
XRN1-204ENST00000465074 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
XRN1-204ENST00000465074 PLEKHO1Q53GL0 409 aaPredicted RBP16.49■□□□□ 0.23
XRN1-204ENST00000465074 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
XRN1-204ENST00000465074 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
XRN1-204ENST00000465074 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
XRN1-204ENST00000465074 HMOX1P09601 288 aa16.48■□□□□ 0.23
XRN1-204ENST00000465074 PHKG2P15735 406 aa16.48■□□□□ 0.23
XRN1-204ENST00000465074 IL13P35225 146 aa16.48■□□□□ 0.23
XRN1-204ENST00000465074 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
XRN1-204ENST00000465074 ZNF530Q6P9A1 599 aaPredicted RBP16.48■□□□□ 0.23
XRN1-204ENST00000465074 SPON1Q9HCB6 807 aa16.48■□□□□ 0.23
XRN1-204ENST00000465074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
XRN1-204ENST00000465074 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
XRN1-204ENST00000465074 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
XRN1-204ENST00000465074 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
XRN1-204ENST00000465074 LY75O60449 1722 aa16.46■□□□□ 0.23
XRN1-204ENST00000465074 U2SURPO15042 1029 aaKnown RBP16.46■□□□□ 0.23
XRN1-204ENST00000465074 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
XRN1-204ENST00000465074 ZNF827Q17R98 1081 aa16.46■□□□□ 0.23
XRN1-204ENST00000465074 PIGBQ92521 554 aa16.46■□□□□ 0.23
XRN1-204ENST00000465074 NKX1-1Q15270 411 aaPredicted RBP16.45■□□□□ 0.22
XRN1-204ENST00000465074 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
XRN1-204ENST00000465074 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
XRN1-204ENST00000465074 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
XRN1-204ENST00000465074 CASZ1Q86V15 1759 aa16.44■□□□□ 0.22
XRN1-204ENST00000465074 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
XRN1-204ENST00000465074 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
XRN1-204ENST00000465074 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
XRN1-204ENST00000465074 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
XRN1-204ENST00000465074 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
XRN1-204ENST00000465074 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
XRN1-204ENST00000465074 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
XRN1-204ENST00000465074 CABP4P57796 275 aa16.41■□□□□ 0.22
XRN1-204ENST00000465074 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
XRN1-204ENST00000465074 ASAP1Q9ULH1 1129 aa16.41■□□□□ 0.22
XRN1-204ENST00000465074 C5P01031 1676 aa16.4■□□□□ 0.22
XRN1-204ENST00000465074 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
XRN1-204ENST00000465074 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
XRN1-204ENST00000465074 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
XRN1-204ENST00000465074 KDRP35968 1356 aa16.38■□□□□ 0.21
XRN1-204ENST00000465074 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
XRN1-204ENST00000465074 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
XRN1-204ENST00000465074 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
XRN1-204ENST00000465074 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
XRN1-204ENST00000465074 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
XRN1-204ENST00000465074 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
XRN1-204ENST00000465074 SIK1P57059 783 aa16.37■□□□□ 0.21
XRN1-204ENST00000465074 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
XRN1-204ENST00000465074 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
XRN1-204ENST00000465074 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
XRN1-204ENST00000465074 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
XRN1-204ENST00000465074 AK7Q96M32 723 aa16.36■□□□□ 0.21
XRN1-204ENST00000465074 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
XRN1-204ENST00000465074 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms