RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
TSPAN1-202ENST00000464786 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
TSPAN1-202ENST00000464786 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
TSPAN1-202ENST00000464786 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
TSPAN1-202ENST00000464786 FAM182BQ5T319 152 aa17.95■□□□□ 0.46
TSPAN1-202ENST00000464786 TNS2Q63HR2 1409 aa17.95■□□□□ 0.46
TSPAN1-202ENST00000464786 ANP32CO43423 234 aa17.94■□□□□ 0.46
TSPAN1-202ENST00000464786 BCL9O00512 1426 aa17.94■□□□□ 0.46
TSPAN1-202ENST00000464786 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
TSPAN1-202ENST00000464786 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
TSPAN1-202ENST00000464786 MEGF6O75095 1541 aa17.93■□□□□ 0.46
TSPAN1-202ENST00000464786 KDRP35968 1356 aa17.92■□□□□ 0.46
TSPAN1-202ENST00000464786 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
TSPAN1-202ENST00000464786 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
TSPAN1-202ENST00000464786 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 FCHSD2O94868 740 aa17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 TRIM37O94972 964 aa17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 HMOX1P09601 288 aa17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
TSPAN1-202ENST00000464786 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
TSPAN1-202ENST00000464786 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
TSPAN1-202ENST00000464786 KAT6BQ8WYB5 2073 aa17.87■□□□□ 0.45
TSPAN1-202ENST00000464786 CYP27B1O15528 508 aa17.87■□□□□ 0.45
TSPAN1-202ENST00000464786 BAG6P46379 1132 aa17.87■□□□□ 0.45
TSPAN1-202ENST00000464786 NEFMP07197 916 aa17.86■□□□□ 0.45
TSPAN1-202ENST00000464786 PHKG2P15735 406 aa17.86■□□□□ 0.45
TSPAN1-202ENST00000464786 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
TSPAN1-202ENST00000464786 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
TSPAN1-202ENST00000464786 APBA3O96018 575 aa17.85■□□□□ 0.45
TSPAN1-202ENST00000464786 ZNF530Q6P9A1 599 aaPredicted RBP17.85■□□□□ 0.45
TSPAN1-202ENST00000464786 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
TSPAN1-202ENST00000464786 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
TSPAN1-202ENST00000464786 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
TSPAN1-202ENST00000464786 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
TSPAN1-202ENST00000464786 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
TSPAN1-202ENST00000464786 DCAF5Q96JK2 942 aa17.83■□□□□ 0.44
TSPAN1-202ENST00000464786 PLSCR1O15162 318 aa17.82■□□□□ 0.44
TSPAN1-202ENST00000464786 KCNQ2O43526 872 aa17.82■□□□□ 0.44
TSPAN1-202ENST00000464786 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
TSPAN1-202ENST00000464786 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
TSPAN1-202ENST00000464786 EP400Q96L91 3159 aa17.82■□□□□ 0.44
TSPAN1-202ENST00000464786 MTHFSDQ2M296 383 aaKnown RBP17.81■□□□□ 0.44
TSPAN1-202ENST00000464786 ERVV-2B6SEH9 535 aa17.8■□□□□ 0.44
TSPAN1-202ENST00000464786 SYTL4Q96C24 671 aaPredicted RBP17.8■□□□□ 0.44
TSPAN1-202ENST00000464786 PKD1L3Q7Z443 1732 aa17.8■□□□□ 0.44
TSPAN1-202ENST00000464786 DEFB132Q7Z7B7 95 aa17.79■□□□□ 0.44
TSPAN1-202ENST00000464786 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
TSPAN1-202ENST00000464786 EN1Q05925 392 aaPredicted RBP17.78■□□□□ 0.44
TSPAN1-202ENST00000464786 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
TSPAN1-202ENST00000464786 CAMKK2Q96RR4 588 aa17.78■□□□□ 0.44
TSPAN1-202ENST00000464786 SBF2Q86WG5 1849 aa17.77■□□□□ 0.44
TSPAN1-202ENST00000464786 SHANK3Q9BYB0 1731 aa17.76■□□□□ 0.43
TSPAN1-202ENST00000464786 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
TSPAN1-202ENST00000464786 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
TSPAN1-202ENST00000464786 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
TSPAN1-202ENST00000464786 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
TSPAN1-202ENST00000464786 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
TSPAN1-202ENST00000464786 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
TSPAN1-202ENST00000464786 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
TSPAN1-202ENST00000464786 CABP4P57796 275 aa17.75■□□□□ 0.43
TSPAN1-202ENST00000464786 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
TSPAN1-202ENST00000464786 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
TSPAN1-202ENST00000464786 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
TSPAN1-202ENST00000464786 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
TSPAN1-202ENST00000464786 EZH2Q15910 746 aaKnown RBP17.74■□□□□ 0.43
TSPAN1-202ENST00000464786 PIGBQ92521 554 aa17.74■□□□□ 0.43
TSPAN1-202ENST00000464786 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
TSPAN1-202ENST00000464786 DIEXFQ68CQ4 756 aaKnown RBP17.73■□□□□ 0.43
TSPAN1-202ENST00000464786 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
TSPAN1-202ENST00000464786 NHSQ6T4R5 1651 aa17.72■□□□□ 0.43
TSPAN1-202ENST00000464786 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
TSPAN1-202ENST00000464786 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
TSPAN1-202ENST00000464786 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
TSPAN1-202ENST00000464786 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
TSPAN1-202ENST00000464786 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
TSPAN1-202ENST00000464786 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
TSPAN1-202ENST00000464786 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
TSPAN1-202ENST00000464786 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
TSPAN1-202ENST00000464786 NBPF14Q5TI25 921 aa17.7■□□□□ 0.42
TSPAN1-202ENST00000464786 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
TSPAN1-202ENST00000464786 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
TSPAN1-202ENST00000464786 TNS1Q9HBL0 1735 aaKnown RBP17.69■□□□□ 0.42
TSPAN1-202ENST00000464786 TEFQ10587 303 aa17.69■□□□□ 0.42
TSPAN1-202ENST00000464786 PROM2Q8N271 834 aa17.69■□□□□ 0.42
TSPAN1-202ENST00000464786 KDM6AO15550 1401 aaPredicted RBP17.69■□□□□ 0.42
TSPAN1-202ENST00000464786 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
TSPAN1-202ENST00000464786 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
TSPAN1-202ENST00000464786 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
TSPAN1-202ENST00000464786 BTAF1O14981 1849 aa17.66■□□□□ 0.42
TSPAN1-202ENST00000464786 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
TSPAN1-202ENST00000464786 RIPK4P57078 832 aa17.66■□□□□ 0.42
TSPAN1-202ENST00000464786 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
TSPAN1-202ENST00000464786 ATG3Q9NT62 314 aa17.66■□□□□ 0.42
TSPAN1-202ENST00000464786 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
TSPAN1-202ENST00000464786 CCNL1Q9UK58 526 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms