RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
PLD3-208ENST00000464586 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
PLD3-208ENST00000464586 TNS1Q9HBL0 1735 aaKnown RBP11.11□□□□□ -0.63
PLD3-208ENST00000464586 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
PLD3-208ENST00000464586 SF3B2Q13435 895 aaKnown RBP11.1□□□□□ -0.63
PLD3-208ENST00000464586 MARCH10Q8NA82 808 aaPredicted RBP11.1□□□□□ -0.63
PLD3-208ENST00000464586 PLEKHG2Q9H7P9 1386 aa11.1□□□□□ -0.63
PLD3-208ENST00000464586 EP400Q96L91 3159 aa11.1□□□□□ -0.63
PLD3-208ENST00000464586 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
PLD3-208ENST00000464586 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
PLD3-208ENST00000464586 ITGB4P16144 1822 aa11.09□□□□□ -0.63
PLD3-208ENST00000464586 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
PLD3-208ENST00000464586 BCL9O00512 1426 aa11.09□□□□□ -0.63
PLD3-208ENST00000464586 NHSQ6T4R5 1651 aa11.08□□□□□ -0.64
PLD3-208ENST00000464586 SULT6B1Q6IMI4 303 aa11.08□□□□□ -0.64
PLD3-208ENST00000464586 DDX54Q8TDD1 881 aaKnown RBP11.08□□□□□ -0.64
PLD3-208ENST00000464586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
PLD3-208ENST00000464586 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
PLD3-208ENST00000464586 PCDH11XQ9BZA7 1347 aa11.08□□□□□ -0.64
PLD3-208ENST00000464586 PCDH11YQ9BZA8 1340 aa11.08□□□□□ -0.64
PLD3-208ENST00000464586 KDRP35968 1356 aa11.07□□□□□ -0.64
PLD3-208ENST00000464586 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
PLD3-208ENST00000464586 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
PLD3-208ENST00000464586 BTAF1O14981 1849 aa11.07□□□□□ -0.64
PLD3-208ENST00000464586 TRIM37O94972 964 aa11.06□□□□□ -0.64
PLD3-208ENST00000464586 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
PLD3-208ENST00000464586 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
PLD3-208ENST00000464586 RGPD3A6NKT7 1758 aaPredicted RBP11.05□□□□□ -0.64
PLD3-208ENST00000464586 RGPD4Q7Z3J3 1758 aa11.05□□□□□ -0.64
PLD3-208ENST00000464586 HMOX1P09601 288 aa11.05□□□□□ -0.64
PLD3-208ENST00000464586 BAG6P46379 1132 aa11.05□□□□□ -0.64
PLD3-208ENST00000464586 AEBP1Q8IUX7 1158 aa11.05□□□□□ -0.64
PLD3-208ENST00000464586 SCN11AQ9UI33 1791 aa11.05□□□□□ -0.64
PLD3-208ENST00000464586 ANP32CO43423 234 aa11.04□□□□□ -0.64
PLD3-208ENST00000464586 IFNL2Q8IZJ0 200 aa11.04□□□□□ -0.64
PLD3-208ENST00000464586 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
PLD3-208ENST00000464586 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
PLD3-208ENST00000464586 DLG5Q8TDM6 1919 aa11.03□□□□□ -0.64
PLD3-208ENST00000464586 CYP27B1O15528 508 aa11.03□□□□□ -0.64
PLD3-208ENST00000464586 APBA3O96018 575 aa11.03□□□□□ -0.64
PLD3-208ENST00000464586 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
PLD3-208ENST00000464586 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
PLD3-208ENST00000464586 ACSBG1Q96GR2 724 aa11.03□□□□□ -0.64
PLD3-208ENST00000464586 HSP90AB1P08238 724 aaKnown RBP11.02□□□□□ -0.65
PLD3-208ENST00000464586 PHKG2P15735 406 aa11.02□□□□□ -0.65
PLD3-208ENST00000464586 NKX1-1Q15270 411 aaPredicted RBP11.02□□□□□ -0.65
PLD3-208ENST00000464586 C1orf141Q5JVX7 400 aa11.02□□□□□ -0.65
PLD3-208ENST00000464586 ZNF530Q6P9A1 599 aaPredicted RBP11.02□□□□□ -0.65
PLD3-208ENST00000464586 RREB1Q92766 1687 aa11.01□□□□□ -0.65
PLD3-208ENST00000464586 FCHSD2O94868 740 aa11.01□□□□□ -0.65
PLD3-208ENST00000464586 NEFMP07197 916 aa11.01□□□□□ -0.65
PLD3-208ENST00000464586 DEFB132Q7Z7B7 95 aa11.01□□□□□ -0.65
PLD3-208ENST00000464586 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
PLD3-208ENST00000464586 PLSCR1O15162 318 aa11□□□□□ -0.65
PLD3-208ENST00000464586 KCNQ2O43526 872 aa11□□□□□ -0.65
PLD3-208ENST00000464586 PRKAR2BP31323 418 aa11□□□□□ -0.65
PLD3-208ENST00000464586 PRIM1P49642 420 aaKnown RBP11□□□□□ -0.65
PLD3-208ENST00000464586 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
PLD3-208ENST00000464586 SYTL4Q96C24 671 aaPredicted RBP11□□□□□ -0.65
PLD3-208ENST00000464586 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
PLD3-208ENST00000464586 LY75O60449 1722 aa11□□□□□ -0.65
PLD3-208ENST00000464586 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
PLD3-208ENST00000464586 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
PLD3-208ENST00000464586 AKAP4Q5JQC9 854 aa10.99□□□□□ -0.65
PLD3-208ENST00000464586 GAS2L2Q8NHY3 880 aa10.99□□□□□ -0.65
PLD3-208ENST00000464586 DCAF5Q96JK2 942 aa10.99□□□□□ -0.65
PLD3-208ENST00000464586 MTHFSDQ2M296 383 aaKnown RBP10.98□□□□□ -0.65
PLD3-208ENST00000464586 PTF1AQ7RTS3 328 aa10.98□□□□□ -0.65
PLD3-208ENST00000464586 CAMKK2Q96RR4 588 aa10.98□□□□□ -0.65
PLD3-208ENST00000464586 ADAMTS7Q9UKP4 1686 aa10.98□□□□□ -0.65
PLD3-208ENST00000464586 ERVV-2B6SEH9 535 aa10.97□□□□□ -0.65
PLD3-208ENST00000464586 EZH2Q15910 746 aaKnown RBP10.97□□□□□ -0.65
PLD3-208ENST00000464586 MPRIPQ6WCQ1 1025 aa10.97□□□□□ -0.65
PLD3-208ENST00000464586 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
PLD3-208ENST00000464586 SIPA1L3O60292 1781 aaPredicted RBP10.96□□□□□ -0.65
PLD3-208ENST00000464586 MAPK8IP3Q9UPT6 1336 aa10.96□□□□□ -0.65
PLD3-208ENST00000464586 CABP4P57796 275 aa10.96□□□□□ -0.65
PLD3-208ENST00000464586 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.65
PLD3-208ENST00000464586 KDM6AO15550 1401 aaPredicted RBP10.95□□□□□ -0.66
PLD3-208ENST00000464586 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
PLD3-208ENST00000464586 GNAT3A8MTJ3 354 aa10.95□□□□□ -0.66
PLD3-208ENST00000464586 SMARCC1Q92922 1105 aaPredicted RBP10.95□□□□□ -0.66
PLD3-208ENST00000464586 PHACTR3Q96KR7 559 aa10.95□□□□□ -0.66
PLD3-208ENST00000464586 RNMTO43148 476 aaKnown RBP10.94□□□□□ -0.66
PLD3-208ENST00000464586 HMGB2P26583 209 aaKnown RBP10.94□□□□□ -0.66
PLD3-208ENST00000464586 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
PLD3-208ENST00000464586 PIGBQ92521 554 aa10.94□□□□□ -0.66
PLD3-208ENST00000464586 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
PLD3-208ENST00000464586 C5P01031 1676 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 ZNF831Q5JPB2 1677 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
PLD3-208ENST00000464586 SLC27A3Q5K4L6 730 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 NBPF14Q5TI25 921 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
PLD3-208ENST00000464586 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 ADAMTS8Q9UP79 889 aa10.93□□□□□ -0.66
PLD3-208ENST00000464586 PAPPAQ13219 1627 aa10.92□□□□□ -0.66
PLD3-208ENST00000464586 NFE2L2Q16236 605 aa10.92□□□□□ -0.66
PLD3-208ENST00000464586 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms