RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-209ENST00000464576 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.31
PTPN18-209ENST00000464576 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
PTPN18-209ENST00000464576 USP47Q96K76 1375 aa13.14□□□□□ -0.31
PTPN18-209ENST00000464576 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 CHD4Q14839 1912 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 UTRNP46939 3433 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
PTPN18-209ENST00000464576 GPR162Q16538 588 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 ZNF827Q17R98 1081 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 LRRC4BQ9NT99 713 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
PTPN18-209ENST00000464576 FYB1O15117 783 aa13.12□□□□□ -0.31
PTPN18-209ENST00000464576 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
PTPN18-209ENST00000464576 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
PTPN18-209ENST00000464576 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
PTPN18-209ENST00000464576 NBPF6Q5VWK0 638 aa13.11□□□□□ -0.31
PTPN18-209ENST00000464576 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
PTPN18-209ENST00000464576 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
PTPN18-209ENST00000464576 NBPF4Q96M43 638 aa13.11□□□□□ -0.31
PTPN18-209ENST00000464576 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
PTPN18-209ENST00000464576 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
PTPN18-209ENST00000464576 KCNQ4P56696 695 aa13.1□□□□□ -0.31
PTPN18-209ENST00000464576 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
PTPN18-209ENST00000464576 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
PTPN18-209ENST00000464576 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
PTPN18-209ENST00000464576 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
PTPN18-209ENST00000464576 PCDH11YQ9BZA8 1340 aa13.09□□□□□ -0.31
PTPN18-209ENST00000464576 MEGF6O75095 1541 aa13.08□□□□□ -0.31
PTPN18-209ENST00000464576 FLT4P35916 1363 aa13.08□□□□□ -0.31
PTPN18-209ENST00000464576 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
PTPN18-209ENST00000464576 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
PTPN18-209ENST00000464576 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.32
PTPN18-209ENST00000464576 LY75O60449 1722 aa13.08□□□□□ -0.32
PTPN18-209ENST00000464576 INSRP06213 1382 aa13.07□□□□□ -0.32
PTPN18-209ENST00000464576 ZNF784Q8NCA9 323 aaPredicted RBP13.07□□□□□ -0.32
PTPN18-209ENST00000464576 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
PTPN18-209ENST00000464576 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
PTPN18-209ENST00000464576 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
PTPN18-209ENST00000464576 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
PTPN18-209ENST00000464576 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
PTPN18-209ENST00000464576 TUBGCP6Q96RT7 1819 aa13.05□□□□□ -0.32
PTPN18-209ENST00000464576 SMARCC1Q92922 1105 aaPredicted RBP13.05□□□□□ -0.32
PTPN18-209ENST00000464576 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
PTPN18-209ENST00000464576 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
PTPN18-209ENST00000464576 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
PTPN18-209ENST00000464576 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
PTPN18-209ENST00000464576 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
PTPN18-209ENST00000464576 AK7Q96M32 723 aa13.03□□□□□ -0.32
PTPN18-209ENST00000464576 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
PTPN18-209ENST00000464576 MAP2P11137 1827 aaKnown RBP13.03□□□□□ -0.32
PTPN18-209ENST00000464576 NSD2O96028 1365 aa13.03□□□□□ -0.32
PTPN18-209ENST00000464576 C5P01031 1676 aa13.02□□□□□ -0.32
PTPN18-209ENST00000464576 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
PTPN18-209ENST00000464576 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
PTPN18-209ENST00000464576 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
PTPN18-209ENST00000464576 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
PTPN18-209ENST00000464576 ITGB4P16144 1822 aa13.01□□□□□ -0.33
PTPN18-209ENST00000464576 CYP27B1O15528 508 aa13□□□□□ -0.33
PTPN18-209ENST00000464576 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
PTPN18-209ENST00000464576 NLGN2Q8NFZ4 835 aa13□□□□□ -0.33
PTPN18-209ENST00000464576 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
PTPN18-209ENST00000464576 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
PTPN18-209ENST00000464576 PHF14O94880 888 aa12.99□□□□□ -0.33
PTPN18-209ENST00000464576 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
PTPN18-209ENST00000464576 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
PTPN18-209ENST00000464576 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
PTPN18-209ENST00000464576 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
PTPN18-209ENST00000464576 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
PTPN18-209ENST00000464576 PKD1L3Q7Z443 1732 aa12.97□□□□□ -0.33
PTPN18-209ENST00000464576 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
PTPN18-209ENST00000464576 C1QTNF8P60827 252 aa12.97□□□□□ -0.33
PTPN18-209ENST00000464576 PIGBQ92521 554 aa12.97□□□□□ -0.33
PTPN18-209ENST00000464576 EYA1Q99502 592 aa12.97□□□□□ -0.33
PTPN18-209ENST00000464576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPN18-209ENST00000464576 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
PTPN18-209ENST00000464576 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPN18-209ENST00000464576 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
PTPN18-209ENST00000464576 C4BP0C0L5 1744 aa12.96□□□□□ -0.34
PTPN18-209ENST00000464576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
PTPN18-209ENST00000464576 LOC102724428A0A0B4J2F2 783 aa12.95□□□□□ -0.34
PTPN18-209ENST00000464576 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
PTPN18-209ENST00000464576 SIK1P57059 783 aa12.95□□□□□ -0.34
PTPN18-209ENST00000464576 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
PTPN18-209ENST00000464576 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
PTPN18-209ENST00000464576 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
PTPN18-209ENST00000464576 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
PTPN18-209ENST00000464576 SSFA2P28290 1259 aa12.94□□□□□ -0.34
PTPN18-209ENST00000464576 GNPATO15228 680 aa12.93□□□□□ -0.34
PTPN18-209ENST00000464576 PHKG2P15735 406 aa12.93□□□□□ -0.34
PTPN18-209ENST00000464576 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPN18-209ENST00000464576 PLEKHO1Q53GL0 409 aaPredicted RBP12.93□□□□□ -0.34
PTPN18-209ENST00000464576 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
PTPN18-209ENST00000464576 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
PTPN18-209ENST00000464576 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
PTPN18-209ENST00000464576 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
PTPN18-209ENST00000464576 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
PTPN18-209ENST00000464576 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
PTPN18-209ENST00000464576 PANK3Q9H999 370 aa12.92□□□□□ -0.34
PTPN18-209ENST00000464576 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms