RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
ALMS1-202ENST00000464408 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
ALMS1-202ENST00000464408 NSD2O96028 1365 aa20.22■□□□□ 0.83
ALMS1-202ENST00000464408 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
ALMS1-202ENST00000464408 LY75O60449 1722 aa20.22■□□□□ 0.83
ALMS1-202ENST00000464408 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
ALMS1-202ENST00000464408 KCNQ4P56696 695 aa20.21■□□□□ 0.83
ALMS1-202ENST00000464408 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
ALMS1-202ENST00000464408 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
ALMS1-202ENST00000464408 EMILIN1Q9Y6C2 1016 aa20.21■□□□□ 0.83
ALMS1-202ENST00000464408 INSRP06213 1382 aa20.2■□□□□ 0.82
ALMS1-202ENST00000464408 FLT4P35916 1363 aa20.2■□□□□ 0.82
ALMS1-202ENST00000464408 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
ALMS1-202ENST00000464408 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
ALMS1-202ENST00000464408 CLSPNQ9HAW4 1339 aa20.19■□□□□ 0.82
ALMS1-202ENST00000464408 MAP2P11137 1827 aaKnown RBP20.18■□□□□ 0.82
ALMS1-202ENST00000464408 SGIP1Q9BQI5 828 aa20.18■□□□□ 0.82
ALMS1-202ENST00000464408 QSER1Q2KHR3 1735 aa20.17■□□□□ 0.82
ALMS1-202ENST00000464408 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
ALMS1-202ENST00000464408 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
ALMS1-202ENST00000464408 POLR3GLQ9BT43 218 aa20.16■□□□□ 0.82
ALMS1-202ENST00000464408 UTRNP46939 3433 aa20.16■□□□□ 0.82
ALMS1-202ENST00000464408 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
ALMS1-202ENST00000464408 RAPGEF4Q8WZA2 1011 aa20.15■□□□□ 0.82
ALMS1-202ENST00000464408 PKD1L3Q7Z443 1732 aa20.14■□□□□ 0.81
ALMS1-202ENST00000464408 KIF24Q5T7B8 1368 aa20.14■□□□□ 0.81
ALMS1-202ENST00000464408 SLC27A3Q5K4L6 730 aa20.14■□□□□ 0.81
ALMS1-202ENST00000464408 FHDC1Q9C0D6 1143 aaPredicted RBP20.14■□□□□ 0.81
ALMS1-202ENST00000464408 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
ALMS1-202ENST00000464408 TATP17735 454 aaPredicted RBP20.13■□□□□ 0.81
ALMS1-202ENST00000464408 ITGB4P16144 1822 aa20.13■□□□□ 0.81
ALMS1-202ENST00000464408 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
ALMS1-202ENST00000464408 PNPLA7Q6ZV29 1317 aa20.12■□□□□ 0.81
ALMS1-202ENST00000464408 HSPA5P11021 654 aaKnown RBP20.11■□□□□ 0.81
ALMS1-202ENST00000464408 SYT17Q9BSW7 474 aa20.11■□□□□ 0.81
ALMS1-202ENST00000464408 NCAPD2Q15021 1401 aa20.1■□□□□ 0.81
ALMS1-202ENST00000464408 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
ALMS1-202ENST00000464408 CYP27B1O15528 508 aa20.1■□□□□ 0.81
ALMS1-202ENST00000464408 YY1P25490 414 aa20.1■□□□□ 0.81
ALMS1-202ENST00000464408 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
ALMS1-202ENST00000464408 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
ALMS1-202ENST00000464408 CCNL1Q9UK58 526 aaPredicted RBP20.09■□□□□ 0.81
ALMS1-202ENST00000464408 C5P01031 1676 aa20.09■□□□□ 0.81
ALMS1-202ENST00000464408 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.81
ALMS1-202ENST00000464408 POLKQ9UBT6 870 aa20.08■□□□□ 0.81
ALMS1-202ENST00000464408 TAF1LQ8IZX4 1826 aa20.08■□□□□ 0.8
ALMS1-202ENST00000464408 WASHC2AQ641Q2 1341 aa20.07■□□□□ 0.8
ALMS1-202ENST00000464408 EIF4G2P78344 907 aaKnown RBP eCLIP20.07■□□□□ 0.8
ALMS1-202ENST00000464408 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
ALMS1-202ENST00000464408 ARXQ96QS3 562 aa20.07■□□□□ 0.8
ALMS1-202ENST00000464408 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
ALMS1-202ENST00000464408 EYA1Q99502 592 aa20.06■□□□□ 0.8
ALMS1-202ENST00000464408 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
ALMS1-202ENST00000464408 MPRIPQ6WCQ1 1025 aa20.05■□□□□ 0.8
ALMS1-202ENST00000464408 PALLDQ8WX93 1383 aa20.04■□□□□ 0.8
ALMS1-202ENST00000464408 PANK3Q9H999 370 aa20.03■□□□□ 0.8
ALMS1-202ENST00000464408 EIF4A2Q14240 407 aaKnown RBP20.02■□□□□ 0.8
ALMS1-202ENST00000464408 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
ALMS1-202ENST00000464408 SLC16A10Q8TF71 515 aa20.02■□□□□ 0.8
ALMS1-202ENST00000464408 MAP3K5Q99683 1374 aa20.01■□□□□ 0.79
ALMS1-202ENST00000464408 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
ALMS1-202ENST00000464408 GOLGB1Q14789 3259 aaKnown RBP20.01■□□□□ 0.79
ALMS1-202ENST00000464408 C4BP0C0L5 1744 aa19.99■□□□□ 0.79
ALMS1-202ENST00000464408 NKX1-1Q15270 411 aaPredicted RBP19.99■□□□□ 0.79
ALMS1-202ENST00000464408 PIGBQ92521 554 aa19.99■□□□□ 0.79
ALMS1-202ENST00000464408 CHD4Q14839 1912 aa19.99■□□□□ 0.79
ALMS1-202ENST00000464408 MSH5O43196 834 aa19.98■□□□□ 0.79
ALMS1-202ENST00000464408 POLD1P28340 1107 aa19.98■□□□□ 0.79
ALMS1-202ENST00000464408 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
ALMS1-202ENST00000464408 AMIGO3Q86WK7 504 aa19.98■□□□□ 0.79
ALMS1-202ENST00000464408 SPG7Q9UQ90 795 aa19.98■□□□□ 0.79
ALMS1-202ENST00000464408 UBR3Q6ZT12 1888 aa19.97■□□□□ 0.79
ALMS1-202ENST00000464408 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
ALMS1-202ENST00000464408 PHKG2P15735 406 aa19.96■□□□□ 0.79
ALMS1-202ENST00000464408 NLGN2Q8NFZ4 835 aa19.96■□□□□ 0.79
ALMS1-202ENST00000464408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.94■□□□□ 0.787e-10■■■■□ 24.2
ALMS1-202ENST00000464408 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
ALMS1-202ENST00000464408 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
ALMS1-202ENST00000464408 ASAP1Q9ULH1 1129 aa19.93■□□□□ 0.78
ALMS1-202ENST00000464408 IFNL2Q8IZJ0 200 aa19.92■□□□□ 0.78
ALMS1-202ENST00000464408 LINC00116Q8NCU8 138 aa19.92■□□□□ 0.78
ALMS1-202ENST00000464408 AEBP1Q8IUX7 1158 aa19.91■□□□□ 0.78
ALMS1-202ENST00000464408 TMOD3Q9NYL9 352 aa19.91■□□□□ 0.78
ALMS1-202ENST00000464408 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
ALMS1-202ENST00000464408 PHF14O94880 888 aa19.9■□□□□ 0.78
ALMS1-202ENST00000464408 SIK1P57059 783 aa19.9■□□□□ 0.78
ALMS1-202ENST00000464408 ITPK1Q13572 414 aa19.9■□□□□ 0.78
ALMS1-202ENST00000464408 GPR162Q16538 588 aa19.9■□□□□ 0.78
ALMS1-202ENST00000464408 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
ALMS1-202ENST00000464408 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
ALMS1-202ENST00000464408 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
ALMS1-202ENST00000464408 ZNF784Q8NCA9 323 aaPredicted RBP19.89■□□□□ 0.77
ALMS1-202ENST00000464408 AK7Q96M32 723 aa19.89■□□□□ 0.77
ALMS1-202ENST00000464408 ATG3Q9NT62 314 aa19.89■□□□□ 0.77
ALMS1-202ENST00000464408 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
ALMS1-202ENST00000464408 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
ALMS1-202ENST00000464408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.86■□□□□ 0.77
ALMS1-202ENST00000464408 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
ALMS1-202ENST00000464408 KDRP35968 1356 aa19.85■□□□□ 0.77
ALMS1-202ENST00000464408 PLEKHG2Q9H7P9 1386 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms