RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 DIAPH1O60610 1272 aaKnown RBP25.25■■□□□ 1.63
HMG20B-208ENST00000464304 SF3B2Q13435 895 aaKnown RBP25.25■■□□□ 1.63
HMG20B-208ENST00000464304 EXOC5O00471 708 aa25.24■■□□□ 1.63
HMG20B-208ENST00000464304 RAPGEF4Q8WZA2 1011 aa25.24■■□□□ 1.63
HMG20B-208ENST00000464304 CFAP53Q96M91 514 aa25.23■■□□□ 1.63
HMG20B-208ENST00000464304 PRKRIP1Q9H875 184 aaPredicted RBP25.23■■□□□ 1.63
HMG20B-208ENST00000464304 TATP17735 454 aaPredicted RBP25.22■■□□□ 1.63
HMG20B-208ENST00000464304 TNS1Q9HBL0 1735 aaKnown RBP25.22■■□□□ 1.63
HMG20B-208ENST00000464304 AEBP1Q8IUX7 1158 aa25.21■■□□□ 1.63
HMG20B-208ENST00000464304 MARCH10Q8NA82 808 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-208ENST00000464304 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
HMG20B-208ENST00000464304 KDRP35968 1356 aa25.18■■□□□ 1.62
HMG20B-208ENST00000464304 SULT6B1Q6IMI4 303 aa25.18■■□□□ 1.62
HMG20B-208ENST00000464304 ZCRB1Q8TBF4 217 aaKnown RBP25.18■■□□□ 1.62
HMG20B-208ENST00000464304 EN1Q05925 392 aaPredicted RBP25.17■■□□□ 1.62
HMG20B-208ENST00000464304 DOT1LQ8TEK3 1739 aa25.17■■□□□ 1.62
HMG20B-208ENST00000464304 U2SURPO15042 1029 aaKnown RBP25.16■■□□□ 1.62
HMG20B-208ENST00000464304 FAM196AQ6ZSG2 479 aa25.16■■□□□ 1.62
HMG20B-208ENST00000464304 VIRMAQ69YN4 1812 aaKnown RBP25.16■■□□□ 1.62
HMG20B-208ENST00000464304 HMOX1P09601 288 aa25.15■■□□□ 1.62
HMG20B-208ENST00000464304 DDX54Q8TDD1 881 aaKnown RBP25.15■■□□□ 1.62
HMG20B-208ENST00000464304 NHSQ6T4R5 1651 aa25.14■■□□□ 1.62
HMG20B-208ENST00000464304 BAG6P46379 1132 aa25.13■■□□□ 1.61
HMG20B-208ENST00000464304 BCL9O00512 1426 aa25.12■■□□□ 1.61
HMG20B-208ENST00000464304 R3HDM1Q15032 1099 aaKnown RBP25.12■■□□□ 1.61
HMG20B-208ENST00000464304 NUDCQ9Y266 331 aa25.12■■□□□ 1.61
HMG20B-208ENST00000464304 PLEKHG2Q9H7P9 1386 aa25.12■■□□□ 1.61
HMG20B-208ENST00000464304 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
HMG20B-208ENST00000464304 PCDH11XQ9BZA7 1347 aa25.12■■□□□ 1.61
HMG20B-208ENST00000464304 PCDH11YQ9BZA8 1340 aa25.12■■□□□ 1.61
HMG20B-208ENST00000464304 ITGB4P16144 1822 aa25.11■■□□□ 1.61
HMG20B-208ENST00000464304 ANP32CO43423 234 aa25.09■■□□□ 1.61
HMG20B-208ENST00000464304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.09■■□□□ 1.612e-6■■□□□ 11.9
HMG20B-208ENST00000464304 SPG7Q9UQ90 795 aa25.09■■□□□ 1.61
HMG20B-208ENST00000464304 BTAF1O14981 1849 aa25.09■■□□□ 1.61
HMG20B-208ENST00000464304 CYP27B1O15528 508 aa25.08■■□□□ 1.61
HMG20B-208ENST00000464304 TRIM37O94972 964 aa25.08■■□□□ 1.61
HMG20B-208ENST00000464304 U2AF1L5P0DN76 240 aaPredicted RBP25.07■■□□□ 1.6
HMG20B-208ENST00000464304 U2AF1Q01081 240 aaKnown RBP eCLIP25.07■■□□□ 1.6
HMG20B-208ENST00000464304 PLEKHO1Q53GL0 409 aaPredicted RBP25.06■■□□□ 1.6
HMG20B-208ENST00000464304 EZH2Q15910 746 aaKnown RBP25.05■■□□□ 1.6
HMG20B-208ENST00000464304 ACSBG1Q96GR2 724 aa25.05■■□□□ 1.6
HMG20B-208ENST00000464304 SCN11AQ9UI33 1791 aa25.05■■□□□ 1.6
HMG20B-208ENST00000464304 AMOTQ4VCS5 1084 aa25.04■■□□□ 1.6
HMG20B-208ENST00000464304 PTF1AQ7RTS3 328 aa25.04■■□□□ 1.6
HMG20B-208ENST00000464304 RSPH6AQ9H0K4 717 aa25.04■■□□□ 1.6
HMG20B-208ENST00000464304 DLG5Q8TDM6 1919 aa25.02■■□□□ 1.6
HMG20B-208ENST00000464304 PHKG2P15735 406 aa25.02■■□□□ 1.6
HMG20B-208ENST00000464304 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
HMG20B-208ENST00000464304 ZNF530Q6P9A1 599 aaPredicted RBP25.02■■□□□ 1.6
HMG20B-208ENST00000464304 IFNL2Q8IZJ0 200 aa25.02■■□□□ 1.6
HMG20B-208ENST00000464304 KCNQ2O43526 872 aa25.01■■□□□ 1.59
HMG20B-208ENST00000464304 RGPD3A6NKT7 1758 aaPredicted RBP25■■□□□ 1.59
HMG20B-208ENST00000464304 RGPD4Q7Z3J3 1758 aa25■■□□□ 1.59
HMG20B-208ENST00000464304 RREB1Q92766 1687 aa25■■□□□ 1.59
HMG20B-208ENST00000464304 NUP188Q5SRE5 1749 aa25■■□□□ 1.59
HMG20B-208ENST00000464304 NKX1-1Q15270 411 aaPredicted RBP24.99■■□□□ 1.59
HMG20B-208ENST00000464304 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
HMG20B-208ENST00000464304 BCL11BQ9C0K0 894 aaPredicted RBP24.99■■□□□ 1.59
HMG20B-208ENST00000464304 FCHSD2O94868 740 aa24.98■■□□□ 1.59
HMG20B-208ENST00000464304 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
HMG20B-208ENST00000464304 PHACTR3Q96KR7 559 aa24.97■■□□□ 1.59
HMG20B-208ENST00000464304 CAMKK2Q96RR4 588 aa24.97■■□□□ 1.59
HMG20B-208ENST00000464304 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
HMG20B-208ENST00000464304 KDM6AO15550 1401 aaPredicted RBP24.96■■□□□ 1.59
HMG20B-208ENST00000464304 APBA3O96018 575 aa24.96■■□□□ 1.59
HMG20B-208ENST00000464304 C1orf141Q5JVX7 400 aa24.96■■□□□ 1.59
HMG20B-208ENST00000464304 PRIM1P49642 420 aaKnown RBP24.95■■□□□ 1.58
HMG20B-208ENST00000464304 SYTL4Q96C24 671 aaPredicted RBP24.95■■□□□ 1.58
HMG20B-208ENST00000464304 LY75O60449 1722 aa24.94■■□□□ 1.58
HMG20B-208ENST00000464304 HSP90AB1P08238 724 aaKnown RBP24.93■■□□□ 1.58
HMG20B-208ENST00000464304 AKAP4Q5JQC9 854 aa24.93■■□□□ 1.58
HMG20B-208ENST00000464304 WDR43Q15061 677 aaKnown RBP eCLIP24.92■■□□□ 1.58
HMG20B-208ENST00000464304 GAS2L2Q8NHY3 880 aa24.92■■□□□ 1.58
HMG20B-208ENST00000464304 MPRIPQ6WCQ1 1025 aa24.91■■□□□ 1.58
HMG20B-208ENST00000464304 DCAF5Q96JK2 942 aa24.91■■□□□ 1.58
HMG20B-208ENST00000464304 PLEKHF1Q96S99 279 aa24.91■■□□□ 1.58
HMG20B-208ENST00000464304 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
HMG20B-208ENST00000464304 SIPA1L3O60292 1781 aaPredicted RBP24.89■■□□□ 1.57
HMG20B-208ENST00000464304 MAP3K5Q99683 1374 aa24.89■■□□□ 1.57
HMG20B-208ENST00000464304 ADAMTS8Q9UP79 889 aa24.88■■□□□ 1.57
HMG20B-208ENST00000464304 DIEXFQ68CQ4 756 aaKnown RBP24.87■■□□□ 1.57
HMG20B-208ENST00000464304 PNNQ9H307 717 aaKnown RBP24.87■■□□□ 1.57
HMG20B-208ENST00000464304 MRC1P22897 1456 aa24.86■■□□□ 1.57
HMG20B-208ENST00000464304 PLSCR1O15162 318 aa24.86■■□□□ 1.57
HMG20B-208ENST00000464304 NEFMP07197 916 aa24.86■■□□□ 1.57
HMG20B-208ENST00000464304 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
HMG20B-208ENST00000464304 ERVV-2B6SEH9 535 aa24.85■■□□□ 1.57
HMG20B-208ENST00000464304 RNMTO43148 476 aaKnown RBP24.85■■□□□ 1.57
HMG20B-208ENST00000464304 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
HMG20B-208ENST00000464304 PIGBQ92521 554 aa24.85■■□□□ 1.57
HMG20B-208ENST00000464304 LGR6Q9HBX8 967 aa24.85■■□□□ 1.57
HMG20B-208ENST00000464304 TMOD3Q9NYL9 352 aa24.85■■□□□ 1.57
HMG20B-208ENST00000464304 GNAT3A8MTJ3 354 aa24.84■■□□□ 1.57
HMG20B-208ENST00000464304 TAF1LQ8IZX4 1826 aa24.83■■□□□ 1.57
HMG20B-208ENST00000464304 PAPPAQ13219 1627 aa24.83■■□□□ 1.56
HMG20B-208ENST00000464304 YY1P25490 414 aa24.82■■□□□ 1.56
HMG20B-208ENST00000464304 CABP4P57796 275 aa24.82■■□□□ 1.56
HMG20B-208ENST00000464304 PNISRQ8TF01 805 aaKnown RBP24.82■■□□□ 1.56
HMG20B-208ENST00000464304 NFE2L2Q16236 605 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms