RNA–Protein interactions for RNA: ENST00000464274.5

HCLS1-203, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-203ENST00000464274 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
HCLS1-203ENST00000464274 NSD2O96028 1365 aa21.34■■□□□ 1.01
HCLS1-203ENST00000464274 ANKRD36BQ8N2N9 1353 aa21.34■■□□□ 1.01
HCLS1-203ENST00000464274 FBLN1P23142 703 aa21.33■■□□□ 1.01
HCLS1-203ENST00000464274 MSL1Q68DK7 614 aa21.33■■□□□ 1.01
HCLS1-203ENST00000464274 USP54Q70EL1 1684 aa21.33■■□□□ 1
HCLS1-203ENST00000464274 NEUROD1Q13562 356 aa21.32■■□□□ 1
HCLS1-203ENST00000464274 CEP350Q5VT06 3117 aa21.32■■□□□ 1
HCLS1-203ENST00000464274 ATP10DQ9P241 1426 aa21.31■■□□□ 1
HCLS1-203ENST00000464274 ZCRB1Q8TBF4 217 aaKnown RBP21.31■■□□□ 1
HCLS1-203ENST00000464274 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
HCLS1-203ENST00000464274 LY75O60449 1722 aa21.28■■□□□ 1
HCLS1-203ENST00000464274 HOXC9P31274 260 aa21.27■■□□□ 1
HCLS1-203ENST00000464274 GPBP1L1Q9HC44 474 aaPredicted RBP21.27■■□□□ 1
HCLS1-203ENST00000464274 TERF2IPQ9NYB0 399 aa21.27■■□□□ 1
HCLS1-203ENST00000464274 MAP3K19Q56UN5 1328 aa21.27■□□□□ 0.99
HCLS1-203ENST00000464274 A0A1W2PP64 1363 aa21.26■□□□□ 0.99
HCLS1-203ENST00000464274 CD2APQ9Y5K6 639 aa21.26■□□□□ 0.99
HCLS1-203ENST00000464274 ZNF526Q8TF50 670 aaPredicted RBP21.25■□□□□ 0.99
HCLS1-203ENST00000464274 USP47Q96K76 1375 aa21.24■□□□□ 0.99
HCLS1-203ENST00000464274 DOT1LQ8TEK3 1739 aa21.24■□□□□ 0.99
HCLS1-203ENST00000464274 HSPA6P17066 643 aa21.24■□□□□ 0.99
HCLS1-203ENST00000464274 AMPHP49418 695 aa21.24■□□□□ 0.99
HCLS1-203ENST00000464274 CARD11Q9BXL7 1154 aa21.24■□□□□ 0.99
HCLS1-203ENST00000464274 NBPF6Q5VWK0 638 aa21.23■□□□□ 0.99
HCLS1-203ENST00000464274 NBPF4Q96M43 638 aa21.23■□□□□ 0.99
HCLS1-203ENST00000464274 MEGF6O75095 1541 aa21.23■□□□□ 0.99
HCLS1-203ENST00000464274 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
HCLS1-203ENST00000464274 USHBP1Q8N6Y0 703 aa21.21■□□□□ 0.99
HCLS1-203ENST00000464274 COG3Q96JB2 828 aa21.21■□□□□ 0.99
HCLS1-203ENST00000464274 WWC3Q9ULE0 1092 aa21.21■□□□□ 0.99
HCLS1-203ENST00000464274 FAM208AQ9UK61 1670 aaKnown RBP21.21■□□□□ 0.99
HCLS1-203ENST00000464274 SMIM5Q71RC9 77 aa21.2■□□□□ 0.98
HCLS1-203ENST00000464274 ADCY9O60503 1353 aa21.2■□□□□ 0.98
HCLS1-203ENST00000464274 AMIGO3Q86WK7 504 aa21.19■□□□□ 0.98
HCLS1-203ENST00000464274 PUS7Q96PZ0 661 aaKnown RBP21.19■□□□□ 0.98
HCLS1-203ENST00000464274 FLAD1Q8NFF5 587 aa21.18■□□□□ 0.98
HCLS1-203ENST00000464274 RRS1Q15050 365 aaKnown RBP21.17■□□□□ 0.98
HCLS1-203ENST00000464274 MPRIPQ6WCQ1 1025 aa21.16■□□□□ 0.98
HCLS1-203ENST00000464274 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
HCLS1-203ENST00000464274 PALLDQ8WX93 1383 aa21.14■□□□□ 0.98
HCLS1-203ENST00000464274 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.97
HCLS1-203ENST00000464274 IGSF1Q8N6C5 1336 aa21.14■□□□□ 0.97
HCLS1-203ENST00000464274 KIF3CO14782 793 aa21.14■□□□□ 0.97
HCLS1-203ENST00000464274 TATP17735 454 aaPredicted RBP21.13■□□□□ 0.97
HCLS1-203ENST00000464274 CYP27B1O15528 508 aa21.12■□□□□ 0.97
HCLS1-203ENST00000464274 C5P01031 1676 aa21.12■□□□□ 0.97
HCLS1-203ENST00000464274 PHF14O94880 888 aa21.11■□□□□ 0.97
HCLS1-203ENST00000464274 AK7Q96M32 723 aa21.11■□□□□ 0.97
HCLS1-203ENST00000464274 TESK2Q96S53 571 aa21.11■□□□□ 0.97
HCLS1-203ENST00000464274 GGNBP2Q9H3C7 697 aa21.11■□□□□ 0.97
HCLS1-203ENST00000464274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.1■□□□□ 0.97
HCLS1-203ENST00000464274 FYB1O15117 783 aa21.1■□□□□ 0.97
HCLS1-203ENST00000464274 HSP90AB2PQ58FF8 381 aa21.1■□□□□ 0.97
HCLS1-203ENST00000464274 TAF1LQ8IZX4 1826 aa21.09■□□□□ 0.97
HCLS1-203ENST00000464274 HMGB2P26583 209 aaKnown RBP21.09■□□□□ 0.97
HCLS1-203ENST00000464274 PIGBQ92521 554 aa21.09■□□□□ 0.97
HCLS1-203ENST00000464274 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.97
HCLS1-203ENST00000464274 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.97
HCLS1-203ENST00000464274 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.97
HCLS1-203ENST00000464274 RTL1A6NKG5 1358 aa21.08■□□□□ 0.96
HCLS1-203ENST00000464274 ST20-MTHFSA0A0A6YYL1 179 aa21.07■□□□□ 0.96
HCLS1-203ENST00000464274 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
HCLS1-203ENST00000464274 DNAJC5GQ8N7S2 189 aa21.05■□□□□ 0.96
HCLS1-203ENST00000464274 LINC00116Q8NCU8 138 aa21.05■□□□□ 0.96
HCLS1-203ENST00000464274 TOGARAM1Q9Y4F4 1720 aa21.04■□□□□ 0.96
HCLS1-203ENST00000464274 INSRP06213 1382 aa21.03■□□□□ 0.96
HCLS1-203ENST00000464274 SSFA2P28290 1259 aa21.03■□□□□ 0.96
HCLS1-203ENST00000464274 LOC102724428A0A0B4J2F2 783 aa21.02■□□□□ 0.96
HCLS1-203ENST00000464274 APLP1P51693 650 aa21.02■□□□□ 0.96
HCLS1-203ENST00000464274 SIK1P57059 783 aa21.02■□□□□ 0.96
HCLS1-203ENST00000464274 UBR3Q6ZT12 1888 aa21.02■□□□□ 0.96
HCLS1-203ENST00000464274 SMG6Q86US8 1419 aaKnown RBP21.02■□□□□ 0.96
HCLS1-203ENST00000464274 ITPK1Q13572 414 aa21.01■□□□□ 0.95
HCLS1-203ENST00000464274 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
HCLS1-203ENST00000464274 ITGB4P16144 1822 aa21.01■□□□□ 0.95
HCLS1-203ENST00000464274 TOMM70O94826 608 aa20.99■□□□□ 0.95
HCLS1-203ENST00000464274 ASAP1Q9ULH1 1129 aa20.99■□□□□ 0.95
HCLS1-203ENST00000464274 A0A0G2JLW4 131 aa20.98■□□□□ 0.95
HCLS1-203ENST00000464274 GNPATO15228 680 aa20.98■□□□□ 0.95
HCLS1-203ENST00000464274 MMP10P09238 476 aa20.98■□□□□ 0.95
HCLS1-203ENST00000464274 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
HCLS1-203ENST00000464274 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
HCLS1-203ENST00000464274 NMRK2Q9NPI5 230 aa20.97■□□□□ 0.95
HCLS1-203ENST00000464274 BCS1LQ9Y276 419 aa20.97■□□□□ 0.95
HCLS1-203ENST00000464274 EMILIN1Q9Y6C2 1016 aa20.97■□□□□ 0.95
HCLS1-203ENST00000464274 FLT4P35916 1363 aa20.97■□□□□ 0.95
HCLS1-203ENST00000464274 NSD3Q9BZ95 1437 aa20.96■□□□□ 0.95
HCLS1-203ENST00000464274 TGFB2P61812 414 aa20.95■□□□□ 0.94
HCLS1-203ENST00000464274 ARHGAP27Q6ZUM4 889 aa20.95■□□□□ 0.94
HCLS1-203ENST00000464274 PXDNLA1KZ92 1463 aa20.94■□□□□ 0.94
HCLS1-203ENST00000464274 SLC24A1O60721 1099 aa20.94■□□□□ 0.94
HCLS1-203ENST00000464274 ATG3Q9NT62 314 aa20.94■□□□□ 0.94
HCLS1-203ENST00000464274 TMOD3Q9NYL9 352 aa20.94■□□□□ 0.94
HCLS1-203ENST00000464274 SPG7Q9UQ90 795 aa20.94■□□□□ 0.94
HCLS1-203ENST00000464274 TONSLQ96HA7 1378 aa20.93■□□□□ 0.94
HCLS1-203ENST00000464274 CICQ96RK0 1608 aaPredicted RBP20.93■□□□□ 0.94
HCLS1-203ENST00000464274 DPEP1P16444 411 aa20.92■□□□□ 0.94
HCLS1-203ENST00000464274 HTRA3P83110 453 aa20.92■□□□□ 0.94
HCLS1-203ENST00000464274 TRAPPC3LQ5T215 181 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms