RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 RGPD2P0DJD1 1756 aa18.72■□□□□ 0.59
COL5A1-205ENST00000464187 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
COL5A1-205ENST00000464187 KDM2BQ8NHM5 1336 aa18.72■□□□□ 0.59
COL5A1-205ENST00000464187 TCERG1O14776 1098 aaKnown RBP18.71■□□□□ 0.59
COL5A1-205ENST00000464187 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
COL5A1-205ENST00000464187 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
COL5A1-205ENST00000464187 MCM10Q7L590 875 aa18.7■□□□□ 0.58
COL5A1-205ENST00000464187 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
COL5A1-205ENST00000464187 COL5A2P05997 1499 aaPredicted RBP18.69■□□□□ 0.58
COL5A1-205ENST00000464187 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
COL5A1-205ENST00000464187 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
COL5A1-205ENST00000464187 ANP32EQ9BTT0 268 aa18.69■□□□□ 0.58
COL5A1-205ENST00000464187 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
COL5A1-205ENST00000464187 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
COL5A1-205ENST00000464187 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
COL5A1-205ENST00000464187 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
COL5A1-205ENST00000464187 TOM1L2Q6ZVM7 507 aa18.67■□□□□ 0.58
COL5A1-205ENST00000464187 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
COL5A1-205ENST00000464187 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
COL5A1-205ENST00000464187 STRN4Q9NRL3 753 aa18.67■□□□□ 0.58
COL5A1-205ENST00000464187 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
COL5A1-205ENST00000464187 HTATSF1O43719 755 aaKnown RBP18.66■□□□□ 0.58
COL5A1-205ENST00000464187 EVA1CP58658 441 aa18.66■□□□□ 0.58
COL5A1-205ENST00000464187 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
COL5A1-205ENST00000464187 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
COL5A1-205ENST00000464187 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
COL5A1-205ENST00000464187 MS4A1P11836 297 aa18.65■□□□□ 0.58
COL5A1-205ENST00000464187 RARSP54136 660 aaKnown RBP18.65■□□□□ 0.58
COL5A1-205ENST00000464187 GNAI1P63096 354 aa18.65■□□□□ 0.58
COL5A1-205ENST00000464187 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
COL5A1-205ENST00000464187 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
COL5A1-205ENST00000464187 MAP3K5Q99683 1374 aa18.65■□□□□ 0.58
COL5A1-205ENST00000464187 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
COL5A1-205ENST00000464187 NUTM2BA6NNL0 878 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-205ENST00000464187 NUTM2EB1AL46 878 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-205ENST00000464187 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
COL5A1-205ENST00000464187 TATP17735 454 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-205ENST00000464187 PDE3AQ14432 1141 aa18.64■□□□□ 0.57
COL5A1-205ENST00000464187 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-205ENST00000464187 NUTM2AQ8IVF1 878 aaPredicted RBP18.64■□□□□ 0.57
COL5A1-205ENST00000464187 EXOSC9Q06265 439 aaKnown RBP18.63■□□□□ 0.57
COL5A1-205ENST00000464187 SKAP1Q86WV1 359 aa18.63■□□□□ 0.57
COL5A1-205ENST00000464187 MEGF6O75095 1541 aa18.63■□□□□ 0.57
COL5A1-205ENST00000464187 MBIPQ9NS73 344 aa18.63■□□□□ 0.57
COL5A1-205ENST00000464187 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
COL5A1-205ENST00000464187 IL17REQ8NFR9 667 aa18.62■□□□□ 0.57
COL5A1-205ENST00000464187 CARD10Q9BWT7 1032 aa18.62■□□□□ 0.57
COL5A1-205ENST00000464187 JCADQ9P266 1359 aa18.62■□□□□ 0.57
COL5A1-205ENST00000464187 CRB1P82279 1406 aa18.62■□□□□ 0.57
COL5A1-205ENST00000464187 COL14A1Q05707 1796 aaKnown RBP18.61■□□□□ 0.57
COL5A1-205ENST00000464187 C1orf141Q5JVX7 400 aa18.61■□□□□ 0.57
COL5A1-205ENST00000464187 CANXP27824 592 aaKnown RBP18.6■□□□□ 0.57
COL5A1-205ENST00000464187 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
COL5A1-205ENST00000464187 CT47B1P0C2W7 299 aaPredicted RBP18.6■□□□□ 0.57
COL5A1-205ENST00000464187 PDE4AP27815 886 aa18.6■□□□□ 0.57
COL5A1-205ENST00000464187 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
COL5A1-205ENST00000464187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL5A1-205ENST00000464187 CHL1O00533 1208 aa18.59■□□□□ 0.57
COL5A1-205ENST00000464187 SPG7Q9UQ90 795 aa18.59■□□□□ 0.57
COL5A1-205ENST00000464187 BACH2Q9BYV9 841 aa18.58■□□□□ 0.57
COL5A1-205ENST00000464187 USP35Q9P2H5 1018 aa18.58■□□□□ 0.57
COL5A1-205ENST00000464187 FRAT1Q92837 279 aaPredicted RBP18.58■□□□□ 0.56
COL5A1-205ENST00000464187 LGR6Q9HBX8 967 aa18.58■□□□□ 0.56
COL5A1-205ENST00000464187 CEMIPQ8WUJ3 1361 aa18.57■□□□□ 0.56
COL5A1-205ENST00000464187 HSPA1LP34931 641 aa18.57■□□□□ 0.56
COL5A1-205ENST00000464187 MPRIPQ6WCQ1 1025 aa18.57■□□□□ 0.56
COL5A1-205ENST00000464187 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
COL5A1-205ENST00000464187 IL2RBP14784 551 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 MIS18AQ9NYP9 233 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 COG6Q9Y2V7 657 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 ANP32AP39687 249 aaKnown RBP18.56■□□□□ 0.56
COL5A1-205ENST00000464187 MYT1Q01538 1121 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
COL5A1-205ENST00000464187 VIRMAQ69YN4 1812 aaKnown RBP18.55■□□□□ 0.56
COL5A1-205ENST00000464187 PHKG2P15735 406 aa18.55■□□□□ 0.56
COL5A1-205ENST00000464187 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
COL5A1-205ENST00000464187 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
COL5A1-205ENST00000464187 TAF7Q15545 349 aaPredicted RBP18.54■□□□□ 0.56
COL5A1-205ENST00000464187 IFNL2Q8IZJ0 200 aa18.54■□□□□ 0.56
COL5A1-205ENST00000464187 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
COL5A1-205ENST00000464187 CLUAP1Q96AJ1 413 aa18.54■□□□□ 0.56
COL5A1-205ENST00000464187 SPATA31A6Q5VVP1 1343 aa18.54■□□□□ 0.56
COL5A1-205ENST00000464187 CYP27B1O15528 508 aa18.53■□□□□ 0.56
COL5A1-205ENST00000464187 RLBP1P12271 317 aa18.53■□□□□ 0.56
COL5A1-205ENST00000464187 ELL2O00472 640 aaPredicted RBP18.53■□□□□ 0.56
COL5A1-205ENST00000464187 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
COL5A1-205ENST00000464187 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
COL5A1-205ENST00000464187 VAMP4O75379 141 aa18.52■□□□□ 0.56
COL5A1-205ENST00000464187 TEFQ10587 303 aa18.52■□□□□ 0.56
COL5A1-205ENST00000464187 TWISTNBQ3B726 338 aaPredicted RBP18.52■□□□□ 0.56
COL5A1-205ENST00000464187 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
COL5A1-205ENST00000464187 SLIT2O94813 1529 aa18.52■□□□□ 0.55
COL5A1-205ENST00000464187 BABAM1Q9NWV8 329 aa18.51■□□□□ 0.55
COL5A1-205ENST00000464187 PLCH1Q4KWH8 1693 aa18.51■□□□□ 0.55
COL5A1-205ENST00000464187 IGHDP01880 384 aa18.51■□□□□ 0.55
COL5A1-205ENST00000464187 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
COL5A1-205ENST00000464187 SSH1Q8WYL5 1049 aa18.51■□□□□ 0.55
COL5A1-205ENST00000464187 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms