RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 YY1P25490 414 aa20.17■□□□□ 0.82
RTN4R-204ENST00000463936 FHDC1Q9C0D6 1143 aaPredicted RBP20.17■□□□□ 0.82
RTN4R-204ENST00000463936 MTFR1LQ9H019 292 aa20.17■□□□□ 0.82
RTN4R-204ENST00000463936 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
RTN4R-204ENST00000463936 TMF1P82094 1093 aa20.16■□□□□ 0.82
RTN4R-204ENST00000463936 HSP90AB2PQ58FF8 381 aa20.16■□□□□ 0.82
RTN4R-204ENST00000463936 SYT17Q9BSW7 474 aa20.16■□□□□ 0.82
RTN4R-204ENST00000463936 ZCRB1Q8TBF4 217 aaKnown RBP20.15■□□□□ 0.82
RTN4R-204ENST00000463936 TUBGCP6Q96RT7 1819 aa20.14■□□□□ 0.81
RTN4R-204ENST00000463936 LY75O60449 1722 aa20.13■□□□□ 0.81
RTN4R-204ENST00000463936 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
RTN4R-204ENST00000463936 KIF20BQ96Q89 1820 aa20.12■□□□□ 0.81
RTN4R-204ENST00000463936 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
RTN4R-204ENST00000463936 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
RTN4R-204ENST00000463936 TIMELESSQ9UNS1 1208 aa20.12■□□□□ 0.81
RTN4R-204ENST00000463936 PNPLA7Q6ZV29 1317 aa20.11■□□□□ 0.81
RTN4R-204ENST00000463936 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
RTN4R-204ENST00000463936 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
RTN4R-204ENST00000463936 EMILIN1Q9Y6C2 1016 aa20.1■□□□□ 0.81
RTN4R-204ENST00000463936 INSRP06213 1382 aa20.09■□□□□ 0.81
RTN4R-204ENST00000463936 SLC27A3Q5K4L6 730 aa20.09■□□□□ 0.81
RTN4R-204ENST00000463936 ARXQ96QS3 562 aa20.09■□□□□ 0.81
RTN4R-204ENST00000463936 QSER1Q2KHR3 1735 aa20.09■□□□□ 0.81
RTN4R-204ENST00000463936 NSD3Q9BZ95 1437 aa20.07■□□□□ 0.8
RTN4R-204ENST00000463936 CYP27B1O15528 508 aa20.06■□□□□ 0.8
RTN4R-204ENST00000463936 FLT4P35916 1363 aa20.05■□□□□ 0.8
RTN4R-204ENST00000463936 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
RTN4R-204ENST00000463936 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
RTN4R-204ENST00000463936 TFCP2L1Q9NZI6 479 aa20.03■□□□□ 0.8
RTN4R-204ENST00000463936 CCNL1Q9UK58 526 aaPredicted RBP20.03■□□□□ 0.8
RTN4R-204ENST00000463936 MAP3K5Q99683 1374 aa20.03■□□□□ 0.8
RTN4R-204ENST00000463936 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.8
RTN4R-204ENST00000463936 NCAPD2Q15021 1401 aa20.02■□□□□ 0.8
RTN4R-204ENST00000463936 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
RTN4R-204ENST00000463936 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
RTN4R-204ENST00000463936 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.79
RTN4R-204ENST00000463936 KIF24Q5T7B8 1368 aa20.01■□□□□ 0.79
RTN4R-204ENST00000463936 CDCA8Q53HL2 280 aa20.01■□□□□ 0.79
RTN4R-204ENST00000463936 AMIGO3Q86WK7 504 aa20.01■□□□□ 0.79
RTN4R-204ENST00000463936 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
RTN4R-204ENST00000463936 GOLGB1Q14789 3259 aaKnown RBP20.01■□□□□ 0.79
RTN4R-204ENST00000463936 MAP2P11137 1827 aaKnown RBP20■□□□□ 0.79
RTN4R-204ENST00000463936 ITGB4P16144 1822 aa20■□□□□ 0.79
RTN4R-204ENST00000463936 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
RTN4R-204ENST00000463936 SMG6Q86US8 1419 aaKnown RBP20■□□□□ 0.79
RTN4R-204ENST00000463936 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
RTN4R-204ENST00000463936 SMIM5Q71RC9 77 aa19.99■□□□□ 0.79
RTN4R-204ENST00000463936 NLGN2Q8NFZ4 835 aa19.99■□□□□ 0.79
RTN4R-204ENST00000463936 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
RTN4R-204ENST00000463936 TAF1LQ8IZX4 1826 aa19.98■□□□□ 0.79
RTN4R-204ENST00000463936 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
RTN4R-204ENST00000463936 ZNF784Q8NCA9 323 aaPredicted RBP19.98■□□□□ 0.79
RTN4R-204ENST00000463936 EYA1Q99502 592 aa19.98■□□□□ 0.79
RTN4R-204ENST00000463936 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
RTN4R-204ENST00000463936 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
RTN4R-204ENST00000463936 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
RTN4R-204ENST00000463936 MPRIPQ6WCQ1 1025 aa19.97■□□□□ 0.79
RTN4R-204ENST00000463936 C5P01031 1676 aa19.97■□□□□ 0.79
RTN4R-204ENST00000463936 PIGBQ92521 554 aa19.96■□□□□ 0.79
RTN4R-204ENST00000463936 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
RTN4R-204ENST00000463936 PALLDQ8WX93 1383 aa19.95■□□□□ 0.78
RTN4R-204ENST00000463936 CHD4Q14839 1912 aa19.94■□□□□ 0.78
RTN4R-204ENST00000463936 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
RTN4R-204ENST00000463936 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
RTN4R-204ENST00000463936 TNNT2P45379 298 aaPredicted RBP19.93■□□□□ 0.78
RTN4R-204ENST00000463936 HSPA5P11021 654 aaKnown RBP19.92■□□□□ 0.78
RTN4R-204ENST00000463936 EIF4A2Q14240 407 aaKnown RBP19.92■□□□□ 0.78
RTN4R-204ENST00000463936 POLR3GLQ9BT43 218 aa19.92■□□□□ 0.78
RTN4R-204ENST00000463936 POLD1P28340 1107 aa19.91■□□□□ 0.78
RTN4R-204ENST00000463936 C4BP0C0L5 1744 aa19.9■□□□□ 0.78
RTN4R-204ENST00000463936 MSH5O43196 834 aa19.9■□□□□ 0.78
RTN4R-204ENST00000463936 YBX3P16989 372 aaKnown RBP eCLIP19.9■□□□□ 0.78
RTN4R-204ENST00000463936 GPR162Q16538 588 aa19.9■□□□□ 0.78
RTN4R-204ENST00000463936 PANK3Q9H999 370 aa19.89■□□□□ 0.77
RTN4R-204ENST00000463936 ASAP1Q9ULH1 1129 aa19.89■□□□□ 0.77
RTN4R-204ENST00000463936 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
RTN4R-204ENST00000463936 PHKG2P15735 406 aa19.88■□□□□ 0.77
RTN4R-204ENST00000463936 LINC00116Q8NCU8 138 aa19.88■□□□□ 0.77
RTN4R-204ENST00000463936 ITPK1Q13572 414 aa19.87■□□□□ 0.77
RTN4R-204ENST00000463936 SPG7Q9UQ90 795 aa19.87■□□□□ 0.77
RTN4R-204ENST00000463936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
RTN4R-204ENST00000463936 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
RTN4R-204ENST00000463936 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
RTN4R-204ENST00000463936 LOC102724428A0A0B4J2F2 783 aa19.84■□□□□ 0.77
RTN4R-204ENST00000463936 SIK1P57059 783 aa19.84■□□□□ 0.77
RTN4R-204ENST00000463936 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
RTN4R-204ENST00000463936 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
RTN4R-204ENST00000463936 ATG3Q9NT62 314 aa19.84■□□□□ 0.77
RTN4R-204ENST00000463936 IGSF1Q8N6C5 1336 aa19.83■□□□□ 0.77
RTN4R-204ENST00000463936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.82■□□□□ 0.76
RTN4R-204ENST00000463936 PHF14O94880 888 aa19.82■□□□□ 0.76
RTN4R-204ENST00000463936 IFNL2Q8IZJ0 200 aa19.82■□□□□ 0.76
RTN4R-204ENST00000463936 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
RTN4R-204ENST00000463936 TMOD3Q9NYL9 352 aa19.81■□□□□ 0.76
RTN4R-204ENST00000463936 AK7Q96M32 723 aa19.8■□□□□ 0.76
RTN4R-204ENST00000463936 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
RTN4R-204ENST00000463936 KDM6AO15550 1401 aaPredicted RBP19.78■□□□□ 0.76
RTN4R-204ENST00000463936 ATP6V1AP38606 617 aa19.78■□□□□ 0.76
RTN4R-204ENST00000463936 CD2APQ9Y5K6 639 aa19.78■□□□□ 0.76
RTN4R-204ENST00000463936 KDRP35968 1356 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms