RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 PPP1R1BQ9UD71 204 aaPredicted RBP24.29■■□□□ 1.48
COL5A1-204ENST00000463925 DOT1LQ8TEK3 1739 aa24.28■■□□□ 1.48
COL5A1-204ENST00000463925 HSP90AB2PQ58FF8 381 aa24.28■■□□□ 1.48
COL5A1-204ENST00000463925 ANKRD26Q9UPS8 1709 aa24.27■■□□□ 1.48
COL5A1-204ENST00000463925 USHBP1Q8N6Y0 703 aa24.25■■□□□ 1.47
COL5A1-204ENST00000463925 RAPGEF4Q8WZA2 1011 aa24.25■■□□□ 1.47
COL5A1-204ENST00000463925 NSD2O96028 1365 aa24.25■■□□□ 1.47
COL5A1-204ENST00000463925 ZBTB7AO95365 584 aa24.24■■□□□ 1.47
COL5A1-204ENST00000463925 SLC27A3Q5K4L6 730 aa24.24■■□□□ 1.47
COL5A1-204ENST00000463925 EMILIN1Q9Y6C2 1016 aa24.24■■□□□ 1.47
COL5A1-204ENST00000463925 PRIM1P49642 420 aaKnown RBP24.23■■□□□ 1.47
COL5A1-204ENST00000463925 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.47
COL5A1-204ENST00000463925 LRRC4BQ9NT99 713 aa24.23■■□□□ 1.47
COL5A1-204ENST00000463925 NCAPD2Q15021 1401 aa24.22■■□□□ 1.47
COL5A1-204ENST00000463925 TATP17735 454 aaPredicted RBP24.22■■□□□ 1.47
COL5A1-204ENST00000463925 PTGER2P43116 358 aa24.22■■□□□ 1.47
COL5A1-204ENST00000463925 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
COL5A1-204ENST00000463925 SYTL4Q96C24 671 aaPredicted RBP24.21■■□□□ 1.47
COL5A1-204ENST00000463925 MTFR1LQ9H019 292 aa24.21■■□□□ 1.47
COL5A1-204ENST00000463925 ZNF827Q17R98 1081 aa24.2■■□□□ 1.46
COL5A1-204ENST00000463925 LY75O60449 1722 aa24.2■■□□□ 1.46
COL5A1-204ENST00000463925 PCDH11XQ9BZA7 1347 aa24.19■■□□□ 1.46
COL5A1-204ENST00000463925 PCDH11YQ9BZA8 1340 aa24.19■■□□□ 1.46
COL5A1-204ENST00000463925 HSPA5P11021 654 aaKnown RBP24.19■■□□□ 1.46
COL5A1-204ENST00000463925 QSER1Q2KHR3 1735 aa24.18■■□□□ 1.46
COL5A1-204ENST00000463925 WASHC2AQ641Q2 1341 aa24.18■■□□□ 1.46
COL5A1-204ENST00000463925 ATF5Q9Y2D1 282 aaPredicted RBP24.18■■□□□ 1.46
COL5A1-204ENST00000463925 AKT1S1Q96B36 256 aa24.17■■□□□ 1.46
COL5A1-204ENST00000463925 POLR3GLQ9BT43 218 aa24.17■■□□□ 1.46
COL5A1-204ENST00000463925 PKD1L3Q7Z443 1732 aa24.17■■□□□ 1.46
COL5A1-204ENST00000463925 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
COL5A1-204ENST00000463925 SGIP1Q9BQI5 828 aa24.16■■□□□ 1.46
COL5A1-204ENST00000463925 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
COL5A1-204ENST00000463925 POLKQ9UBT6 870 aa24.14■■□□□ 1.45
COL5A1-204ENST00000463925 CYP27B1O15528 508 aa24.12■■□□□ 1.45
COL5A1-204ENST00000463925 TUBGCP6Q96RT7 1819 aa24.11■■□□□ 1.45
COL5A1-204ENST00000463925 DCAF8L1A6NGE4 600 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 KCNQ4P56696 695 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 SLC16A10Q8TF71 515 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 EYA1Q99502 592 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 PANK3Q9H999 370 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 CCNL1Q9UK58 526 aaPredicted RBP24.1■■□□□ 1.45
COL5A1-204ENST00000463925 TOGARAM1Q9Y4F4 1720 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 PNPLA7Q6ZV29 1317 aa24.1■■□□□ 1.45
COL5A1-204ENST00000463925 COL24A1Q17RW2 1714 aa24.08■■□□□ 1.45
COL5A1-204ENST00000463925 FHDC1Q9C0D6 1143 aaPredicted RBP24.08■■□□□ 1.45
COL5A1-204ENST00000463925 TFCP2L1Q9NZI6 479 aa24.08■■□□□ 1.45
COL5A1-204ENST00000463925 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
COL5A1-204ENST00000463925 PLEKHG2Q9H7P9 1386 aa24.07■■□□□ 1.44
COL5A1-204ENST00000463925 SYT17Q9BSW7 474 aa24.07■■□□□ 1.44
COL5A1-204ENST00000463925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.07■■□□□ 1.44
COL5A1-204ENST00000463925 NKX1-1Q15270 411 aaPredicted RBP24.06■■□□□ 1.44
COL5A1-204ENST00000463925 ARXQ96QS3 562 aa24.06■■□□□ 1.44
COL5A1-204ENST00000463925 SPG7Q9UQ90 795 aa24.06■■□□□ 1.44
COL5A1-204ENST00000463925 PALLDQ8WX93 1383 aa24.05■■□□□ 1.44
COL5A1-204ENST00000463925 TNNT2P45379 298 aaPredicted RBP24.05■■□□□ 1.44
COL5A1-204ENST00000463925 EIF4A2Q14240 407 aaKnown RBP24.05■■□□□ 1.44
COL5A1-204ENST00000463925 ITGB4P16144 1822 aa24.05■■□□□ 1.44
COL5A1-204ENST00000463925 HMGB2P26583 209 aaKnown RBP24.04■■□□□ 1.44
COL5A1-204ENST00000463925 C5P01031 1676 aa24.04■■□□□ 1.44
COL5A1-204ENST00000463925 MPRIPQ6WCQ1 1025 aa24.03■■□□□ 1.44
COL5A1-204ENST00000463925 YY1P25490 414 aa24.02■■□□□ 1.44
COL5A1-204ENST00000463925 IGSF1Q8N6C5 1336 aa24.02■■□□□ 1.44
COL5A1-204ENST00000463925 SMARCC1Q92922 1105 aaPredicted RBP24.01■■□□□ 1.43
COL5A1-204ENST00000463925 TAF1LQ8IZX4 1826 aa24■■□□□ 1.43
COL5A1-204ENST00000463925 POLD1P28340 1107 aa24■■□□□ 1.43
COL5A1-204ENST00000463925 PIGBQ92521 554 aa23.99■■□□□ 1.43
COL5A1-204ENST00000463925 PHKG2P15735 406 aa23.98■■□□□ 1.43
COL5A1-204ENST00000463925 IFNL2Q8IZJ0 200 aa23.98■■□□□ 1.43
COL5A1-204ENST00000463925 MORC1Q86VD1 984 aa23.97■■□□□ 1.43
COL5A1-204ENST00000463925 KNSTRNQ9Y448 316 aa23.97■■□□□ 1.43
COL5A1-204ENST00000463925 COL23A1Q86Y22 540 aaPredicted RBP23.96■■□□□ 1.43
COL5A1-204ENST00000463925 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
COL5A1-204ENST00000463925 KIF7Q2M1P5 1343 aa23.94■■□□□ 1.42
COL5A1-204ENST00000463925 TMOD3Q9NYL9 352 aa23.94■■□□□ 1.42
COL5A1-204ENST00000463925 FLAD1Q8NFF5 587 aa23.93■■□□□ 1.42
COL5A1-204ENST00000463925 AMER1Q5JTC6 1135 aaPredicted RBP23.92■■□□□ 1.42
COL5A1-204ENST00000463925 MSH5O43196 834 aa23.91■■□□□ 1.42
COL5A1-204ENST00000463925 LOC102724428A0A0B4J2F2 783 aa23.9■■□□□ 1.42
COL5A1-204ENST00000463925 SIK1P57059 783 aa23.9■■□□□ 1.42
COL5A1-204ENST00000463925 UTRNP46939 3433 aa23.9■■□□□ 1.42
COL5A1-204ENST00000463925 AK7Q96M32 723 aa23.89■■□□□ 1.41
COL5A1-204ENST00000463925 UBR3Q6ZT12 1888 aa23.89■■□□□ 1.41
COL5A1-204ENST00000463925 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
COL5A1-204ENST00000463925 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
COL5A1-204ENST00000463925 PLEKHO1Q53GL0 409 aaPredicted RBP23.88■■□□□ 1.41
COL5A1-204ENST00000463925 KLHL34Q8N239 644 aa23.88■■□□□ 1.41
COL5A1-204ENST00000463925 ASAP1Q9ULH1 1129 aa23.88■■□□□ 1.41
COL5A1-204ENST00000463925 KDRP35968 1356 aa23.88■■□□□ 1.41
COL5A1-204ENST00000463925 ERVV-2B6SEH9 535 aa23.87■■□□□ 1.41
COL5A1-204ENST00000463925 DCAF5Q96JK2 942 aa23.87■■□□□ 1.41
COL5A1-204ENST00000463925 KDM6AO15550 1401 aaPredicted RBP23.85■■□□□ 1.41
COL5A1-204ENST00000463925 CHD4Q14839 1912 aa23.85■■□□□ 1.41
COL5A1-204ENST00000463925 MSL1Q68DK7 614 aa23.85■■□□□ 1.41
COL5A1-204ENST00000463925 ZNF530Q6P9A1 599 aaPredicted RBP23.85■■□□□ 1.41
COL5A1-204ENST00000463925 AMIGO3Q86WK7 504 aa23.85■■□□□ 1.41
COL5A1-204ENST00000463925 AEBP1Q8IUX7 1158 aa23.85■■□□□ 1.41
COL5A1-204ENST00000463925 LINC00116Q8NCU8 138 aa23.85■■□□□ 1.41
COL5A1-204ENST00000463925 ATG3Q9NT62 314 aa23.85■■□□□ 1.41
COL5A1-204ENST00000463925 ZNF831Q5JPB2 1677 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms