RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TNRC6CQ9HCJ0 1690 aaKnown RBP4.69□□□□□ -1.66
COL8A1-205ENST00000463753 BRD4O60885 1362 aaPredicted RBP4.69□□□□□ -1.66
COL8A1-205ENST00000463753 PITPNM2Q9BZ72 1349 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 CDK11BP21127 795 aaKnown RBP4.69□□□□□ -1.66
COL8A1-205ENST00000463753 APLP1P51693 650 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 DUOX2Q9NRD8 1548 aa4.69□□□□□ -1.66
COL8A1-205ENST00000463753 FOSBP53539 338 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 POGKQ9P215 609 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 CDC42BPGQ6DT37 1551 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 WNK3Q9BYP7 1800 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 MST1RQ04912 1400 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 MYOM1P52179 1685 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 CENPJQ9HC77 1338 aaPredicted RBP4.68□□□□□ -1.66
COL8A1-205ENST00000463753 HMGB2P26583 209 aaKnown RBP4.68□□□□□ -1.66
COL8A1-205ENST00000463753 NCLP19338 710 aaKnown RBP4.68□□□□□ -1.66
COL8A1-205ENST00000463753 ZNF710Q8N1W2 664 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 KNDC1Q76NI1 1749 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 CRYBG1Q9Y4K1 1723 aa4.68□□□□□ -1.66
COL8A1-205ENST00000463753 NRKQ7Z2Y5 1582 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 AFF2P51816 1311 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 PEAK1Q9H792 1746 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 HSPA6P17066 643 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 OSBPP22059 807 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 L1TD1Q5T7N2 865 aaKnown RBP4.67□□□□□ -1.66
COL8A1-205ENST00000463753 TMEM51Q9NW97 253 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 PAPPAQ13219 1627 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 HFM1A2PYH4 1435 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 GCC2Q8IWJ2 1684 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 TPM2P07951 284 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 PPP4R3BQ5MIZ7 849 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 ZNF784Q8NCA9 323 aaPredicted RBP4.67□□□□□ -1.66
COL8A1-205ENST00000463753 FBXW7Q969H0 707 aa4.67□□□□□ -1.66
COL8A1-205ENST00000463753 PIP4K2BP78356 416 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 FAM9BQ8IZU0 186 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 KHSRPQ92945 711 aaKnown RBP eCLIP4.66□□□□□ -1.66
COL8A1-205ENST00000463753 PANK2Q9BZ23 570 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 TMEM94Q12767 1356 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 TNNT2P45379 298 aaPredicted RBP4.66□□□□□ -1.66
COL8A1-205ENST00000463753 KIAA1211Q6ZU35 1233 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 CERS3Q8IU89 383 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 TEX2Q8IWB9 1127 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 CNPY4Q8N129 248 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 LHX6Q9UPM6 363 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 DHX57Q6P158 1386 aaKnown RBP4.66□□□□□ -1.66
COL8A1-205ENST00000463753 TMEM2Q9UHN6 1383 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 ZFYVE9O95405 1425 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 CEP162Q5TB80 1403 aa4.66□□□□□ -1.66
COL8A1-205ENST00000463753 NUDT7P0C024 238 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 BAG6P46379 1132 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 DNTTIP2Q5QJE6 756 aaKnown RBP4.65□□□□□ -1.66
COL8A1-205ENST00000463753 SMYD5Q6GMV2 418 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 TYW1BQ6NUM6 668 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 SMAP1Q8IYB5 467 aaPredicted RBP4.65□□□□□ -1.66
COL8A1-205ENST00000463753 GZF1Q9H116 711 aaPredicted RBP4.65□□□□□ -1.66
COL8A1-205ENST00000463753 PCDHGA10Q9Y5H3 936 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 NRXN3Q9Y4C0 1643 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 LRRIQ1Q96JM4 1722 aa4.65□□□□□ -1.66
COL8A1-205ENST00000463753 SEMA3EO15041 775 aa4.65□□□□□ -1.67
COL8A1-205ENST00000463753 AEBP1Q8IUX7 1158 aa4.65□□□□□ -1.67
COL8A1-205ENST00000463753 LRRC59Q96AG4 307 aaKnown RBP4.65□□□□□ -1.67
COL8A1-205ENST00000463753 ADGRL2O95490 1459 aa4.65□□□□□ -1.67
COL8A1-205ENST00000463753 MBD5Q9P267 1494 aa4.65□□□□□ -1.67
COL8A1-205ENST00000463753 ARID3CA6NKF2 412 aa4.65□□□□□ -1.67
COL8A1-205ENST00000463753 EN1Q05925 392 aaPredicted RBP4.65□□□□□ -1.67
COL8A1-205ENST00000463753 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.65□□□□□ -1.67
COL8A1-205ENST00000463753 SLC4A5Q9BY07 1137 aa4.65□□□□□ -1.67
COL8A1-205ENST00000463753 GIGYF1O75420 1035 aaPredicted RBP4.64□□□□□ -1.67
COL8A1-205ENST00000463753 MLLT3P42568 568 aaPredicted RBP4.64□□□□□ -1.67
COL8A1-205ENST00000463753 PRIM1P49642 420 aaKnown RBP4.64□□□□□ -1.67
COL8A1-205ENST00000463753 C14orf37Q86TY3 774 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 ZNF687Q8N1G0 1237 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 BCL2L12Q9HB09 334 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 GOLGA6L3A6NEY3 463 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 ESPNB1AK53 854 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 GPR37O15354 613 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 XRCC6P12956 609 aaKnown RBP eCLIP4.64□□□□□ -1.67
COL8A1-205ENST00000463753 PBX2P40425 430 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 WWC1Q8IX03 1113 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 TRIM44Q96DX7 344 aaPredicted RBP4.64□□□□□ -1.67
COL8A1-205ENST00000463753 BACH2Q9BYV9 841 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 ABCC6O95255 1503 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 TNS2Q63HR2 1409 aa4.64□□□□□ -1.67
COL8A1-205ENST00000463753 POTEB3A0JP26 581 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 IRX3P78415 501 aaPredicted RBP4.63□□□□□ -1.67
COL8A1-205ENST00000463753 POTEBQ6S5H4 581 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 SKAP1Q86WV1 359 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 HOMEZQ8IX15 550 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 MTUS2Q5JR59 1369 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 VIRMAQ69YN4 1812 aaKnown RBP4.63□□□□□ -1.67
COL8A1-205ENST00000463753 TCERG1O14776 1098 aaKnown RBP4.63□□□□□ -1.67
COL8A1-205ENST00000463753 UBTFP17480 764 aaKnown RBP4.63□□□□□ -1.67
COL8A1-205ENST00000463753 ZDHHC16Q969W1 377 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 SLAIN2Q9P270 581 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 ERBB4Q15303 1308 aa4.63□□□□□ -1.67
COL8A1-205ENST00000463753 NOS1P29475 1434 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 CEBPAP49715 358 aaPredicted RBP4.62□□□□□ -1.67
COL8A1-205ENST00000463753 DMTNQ08495 405 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 SF3B2Q13435 895 aaKnown RBP4.62□□□□□ -1.67
COL8A1-205ENST00000463753 TTC13Q8NBP0 860 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 RBM27Q9P2N5 1060 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms