RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 ARXQ96QS3 562 aa32.54■■■□□ 2.8
SSNA1-203ENST00000463511 RTL1A6NKG5 1358 aa32.54■■■□□ 2.8
SSNA1-203ENST00000463511 SLC24A1O60721 1099 aa32.53■■■□□ 2.8
SSNA1-203ENST00000463511 SLC27A3Q5K4L6 730 aa32.52■■■□□ 2.8
SSNA1-203ENST00000463511 CCER1Q8TC90 406 aaPredicted RBP32.52■■■□□ 2.8
SSNA1-203ENST00000463511 AKT1S1Q96B36 256 aa32.52■■■□□ 2.8
SSNA1-203ENST00000463511 CLSPNQ9HAW4 1339 aa32.51■■■□□ 2.8
SSNA1-203ENST00000463511 PRIM1P49642 420 aaKnown RBP32.51■■■□□ 2.79
SSNA1-203ENST00000463511 RRS1Q15050 365 aaKnown RBP32.51■■■□□ 2.79
SSNA1-203ENST00000463511 NSD2O96028 1365 aa32.5■■■□□ 2.79
SSNA1-203ENST00000463511 USP47Q96K76 1375 aa32.49■■■□□ 2.79
SSNA1-203ENST00000463511 KCNQ4P56696 695 aa32.49■■■□□ 2.79
SSNA1-203ENST00000463511 ZCRB1Q8TBF4 217 aaKnown RBP32.49■■■□□ 2.79
SSNA1-203ENST00000463511 MAP3K5Q99683 1374 aa32.48■■■□□ 2.79
SSNA1-203ENST00000463511 GGNBP2Q9H3C7 697 aa32.48■■■□□ 2.79
SSNA1-203ENST00000463511 TMF1P82094 1093 aa32.47■■■□□ 2.79
SSNA1-203ENST00000463511 FYB1O15117 783 aa32.46■■■□□ 2.79
SSNA1-203ENST00000463511 PNPLA7Q6ZV29 1317 aa32.46■■■□□ 2.79
SSNA1-203ENST00000463511 SMG6Q86US8 1419 aaKnown RBP32.45■■■□□ 2.79
SSNA1-203ENST00000463511 USHBP1Q8N6Y0 703 aa32.45■■■□□ 2.79
SSNA1-203ENST00000463511 NBPF6Q5VWK0 638 aa32.44■■■□□ 2.78
SSNA1-203ENST00000463511 NBPF4Q96M43 638 aa32.44■■■□□ 2.78
SSNA1-203ENST00000463511 SLC16A10Q8TF71 515 aa32.43■■■□□ 2.78
SSNA1-203ENST00000463511 TFCP2L1Q9NZI6 479 aa32.43■■■□□ 2.78
SSNA1-203ENST00000463511 C5P01031 1676 aa32.43■■■□□ 2.78
SSNA1-203ENST00000463511 ZNF784Q8NCA9 323 aaPredicted RBP32.41■■■□□ 2.78
SSNA1-203ENST00000463511 KLHL34Q8N239 644 aa32.4■■■□□ 2.78
SSNA1-203ENST00000463511 TAF1LQ8IZX4 1826 aa32.4■■■□□ 2.78
SSNA1-203ENST00000463511 ITGB4P16144 1822 aa32.38■■■□□ 2.77
SSNA1-203ENST00000463511 CGNL1Q0VF96 1302 aa32.38■■■□□ 2.77
SSNA1-203ENST00000463511 POLD1P28340 1107 aa32.38■■■□□ 2.77
SSNA1-203ENST00000463511 RAPGEF4Q8WZA2 1011 aa32.38■■■□□ 2.77
SSNA1-203ENST00000463511 CCNL1Q9UK58 526 aaPredicted RBP32.38■■■□□ 2.77
SSNA1-203ENST00000463511 TOGARAM1Q9Y4F4 1720 aa32.37■■■□□ 2.77
SSNA1-203ENST00000463511 GOLGB1Q14789 3259 aaKnown RBP32.37■■■□□ 2.77
SSNA1-203ENST00000463511 INSRP06213 1382 aa32.36■■■□□ 2.77
SSNA1-203ENST00000463511 FLT4P35916 1363 aa32.36■■■□□ 2.77
SSNA1-203ENST00000463511 HSP90AB2PQ58FF8 381 aa32.36■■■□□ 2.77
SSNA1-203ENST00000463511 PKD1L3Q7Z443 1732 aa32.35■■■□□ 2.77
SSNA1-203ENST00000463511 ANKRD26Q9UPS8 1709 aa32.34■■■□□ 2.77
SSNA1-203ENST00000463511 TATP17735 454 aaPredicted RBP32.34■■■□□ 2.77
SSNA1-203ENST00000463511 GPR162Q16538 588 aa32.32■■■□□ 2.76
SSNA1-203ENST00000463511 CDCA8Q53HL2 280 aa32.32■■■□□ 2.76
SSNA1-203ENST00000463511 MAP2P11137 1827 aaKnown RBP32.31■■■□□ 2.76
SSNA1-203ENST00000463511 KIF24Q5T7B8 1368 aa32.31■■■□□ 2.76
SSNA1-203ENST00000463511 PCDH11XQ9BZA7 1347 aa32.3■■■□□ 2.76
SSNA1-203ENST00000463511 PCDH11YQ9BZA8 1340 aa32.3■■■□□ 2.76
SSNA1-203ENST00000463511 NSD3Q9BZ95 1437 aa32.29■■■□□ 2.76
SSNA1-203ENST00000463511 MSH5O43196 834 aa32.28■■■□□ 2.76
SSNA1-203ENST00000463511 PELP1Q8IZL8 1130 aaKnown RBP32.27■■■□□ 2.76
SSNA1-203ENST00000463511 CARD14Q9BXL6 1004 aa32.27■■■□□ 2.76
SSNA1-203ENST00000463511 COL23A1Q86Y22 540 aaPredicted RBP32.26■■■□□ 2.75
SSNA1-203ENST00000463511 NLGN2Q8NFZ4 835 aa32.26■■■□□ 2.75
SSNA1-203ENST00000463511 EMILIN1Q9Y6C2 1016 aa32.26■■■□□ 2.75
SSNA1-203ENST00000463511 PALLDQ8WX93 1383 aa32.24■■■□□ 2.75
SSNA1-203ENST00000463511 C4BP0C0L5 1744 aa32.24■■■□□ 2.75
SSNA1-203ENST00000463511 CYP27B1O15528 508 aa32.23■■■□□ 2.75
SSNA1-203ENST00000463511 TIMELESSQ9UNS1 1208 aa32.23■■■□□ 2.75
SSNA1-203ENST00000463511 MPRIPQ6WCQ1 1025 aa32.22■■■□□ 2.75
SSNA1-203ENST00000463511 UBR3Q6ZT12 1888 aa32.21■■■□□ 2.75
SSNA1-203ENST00000463511 MSL1Q68DK7 614 aa32.21■■■□□ 2.75
SSNA1-203ENST00000463511 NCAPD2Q15021 1401 aa32.2■■■□□ 2.75
SSNA1-203ENST00000463511 PPM1GO15355 546 aaPredicted RBP32.19■■■□□ 2.74
SSNA1-203ENST00000463511 YBX3P16989 372 aaKnown RBP eCLIP32.11■■■□□ 2.733e-6■□□□□ 9.7
SSNA1-203ENST00000463511 SMARCC1Q92922 1105 aaPredicted RBP32.11■■■□□ 2.73
SSNA1-203ENST00000463511 WASHC2AQ641Q2 1341 aa32.1■■■□□ 2.73
SSNA1-203ENST00000463511 HMGB2P26583 209 aaKnown RBP32.1■■■□□ 2.73
SSNA1-203ENST00000463511 FLAD1Q8NFF5 587 aa32.1■■■□□ 2.73
SSNA1-203ENST00000463511 C1QTNF8P60827 252 aa32.09■■■□□ 2.73
SSNA1-203ENST00000463511 PIGBQ92521 554 aa32.09■■■□□ 2.73
SSNA1-203ENST00000463511 SPG7Q9UQ90 795 aa32.09■■■□□ 2.73
SSNA1-203ENST00000463511 NKX1-1Q15270 411 aaPredicted RBP32.08■■■□□ 2.73
SSNA1-203ENST00000463511 AK7Q96M32 723 aa32.08■■■□□ 2.73
SSNA1-203ENST00000463511 AMIGO3Q86WK7 504 aa32.07■■■□□ 2.72
SSNA1-203ENST00000463511 EYA1Q99502 592 aa32.07■■■□□ 2.72
SSNA1-203ENST00000463511 POLR3GLQ9BT43 218 aa32.06■■■□□ 2.72
SSNA1-203ENST00000463511 SENP3-EIF4A1A0A087X0R7 540 aa32.05■■■□□ 2.72
SSNA1-203ENST00000463511 GRIN3BO60391 1043 aa32.04■■■□□ 2.72
SSNA1-203ENST00000463511 PHF14O94880 888 aa32.04■■■□□ 2.72
SSNA1-203ENST00000463511 POLKQ9UBT6 870 aa32.04■■■□□ 2.72
SSNA1-203ENST00000463511 SMIM5Q71RC9 77 aa32.03■■■□□ 2.72
SSNA1-203ENST00000463511 CD2APQ9Y5K6 639 aa32.03■■■□□ 2.72
SSNA1-203ENST00000463511 GIGYF1O75420 1035 aaPredicted RBP32.01■■■□□ 2.71
SSNA1-203ENST00000463511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.01■■■□□ 2.71
SSNA1-203ENST00000463511 TMOD3Q9NYL9 352 aa32.01■■■□□ 2.71
SSNA1-203ENST00000463511 LOC102724428A0A0B4J2F2 783 aa32■■■□□ 2.71
SSNA1-203ENST00000463511 TNNT2P45379 298 aaPredicted RBP32■■■□□ 2.71
SSNA1-203ENST00000463511 SIK1P57059 783 aa32■■■□□ 2.71
SSNA1-203ENST00000463511 LINC00116Q8NCU8 138 aa32■■■□□ 2.71
SSNA1-203ENST00000463511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.99■■■□□ 2.71
SSNA1-203ENST00000463511 PHKG2P15735 406 aa31.98■■■□□ 2.71
SSNA1-203ENST00000463511 EIF4A2Q14240 407 aaKnown RBP31.98■■■□□ 2.71
SSNA1-203ENST00000463511 IFNL2Q8IZJ0 200 aa31.98■■■□□ 2.71
SSNA1-203ENST00000463511 ASAP1Q9ULH1 1129 aa31.98■■■□□ 2.71
SSNA1-203ENST00000463511 SSFA2P28290 1259 aa31.96■■■□□ 2.71
SSNA1-203ENST00000463511 ITPK1Q13572 414 aa31.94■■■□□ 2.7
SSNA1-203ENST00000463511 COL5A3P25940 1745 aaPredicted RBP31.94■■■□□ 2.7
SSNA1-203ENST00000463511 ZNF831Q5JPB2 1677 aa31.92■■■□□ 2.7
SSNA1-203ENST00000463511 GNPATO15228 680 aa31.92■■■□□ 2.7
SSNA1-203ENST00000463511 ATP6V1AP38606 617 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms