RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 SHANK3Q9BYB0 1731 aa18.16■□□□□ 0.5
PLOD3-210ENST00000463479 PUS7Q96PZ0 661 aaKnown RBP18.16■□□□□ 0.5
PLOD3-210ENST00000463479 NSD2O96028 1365 aa18.16■□□□□ 0.5
PLOD3-210ENST00000463479 RGPD2P0DJD1 1756 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 FBLN1P23142 703 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 POLD1P28340 1107 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 HOXC9P31274 260 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 C1QTNF8P60827 252 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 TFCP2L1Q9NZI6 479 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 UTRNP46939 3433 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 LY75O60449 1722 aa18.15■□□□□ 0.5
PLOD3-210ENST00000463479 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
PLOD3-210ENST00000463479 MEGF6O75095 1541 aa18.13■□□□□ 0.49
PLOD3-210ENST00000463479 AMPHP49418 695 aa18.13■□□□□ 0.49
PLOD3-210ENST00000463479 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
PLOD3-210ENST00000463479 COG3Q96JB2 828 aa18.13■□□□□ 0.49
PLOD3-210ENST00000463479 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
PLOD3-210ENST00000463479 ZCRB1Q8TBF4 217 aaKnown RBP18.12■□□□□ 0.49
PLOD3-210ENST00000463479 TESK2Q96S53 571 aa18.12■□□□□ 0.49
PLOD3-210ENST00000463479 TIMELESSQ9UNS1 1208 aa18.11■□□□□ 0.49
PLOD3-210ENST00000463479 CCNL1Q9UK58 526 aaPredicted RBP18.1■□□□□ 0.49
PLOD3-210ENST00000463479 ST20-MTHFSA0A0A6YYL1 179 aa18.09■□□□□ 0.49
PLOD3-210ENST00000463479 RTL1A6NKG5 1358 aa18.08■□□□□ 0.49
PLOD3-210ENST00000463479 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
PLOD3-210ENST00000463479 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
PLOD3-210ENST00000463479 USP47Q96K76 1375 aa18.07■□□□□ 0.48
PLOD3-210ENST00000463479 MSH5O43196 834 aa18.07■□□□□ 0.48
PLOD3-210ENST00000463479 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
PLOD3-210ENST00000463479 COL23A1Q86Y22 540 aaPredicted RBP18.07■□□□□ 0.48
PLOD3-210ENST00000463479 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
PLOD3-210ENST00000463479 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
PLOD3-210ENST00000463479 YBX3P16989 372 aaKnown RBP eCLIP18.06■□□□□ 0.48
PLOD3-210ENST00000463479 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
PLOD3-210ENST00000463479 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
PLOD3-210ENST00000463479 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
PLOD3-210ENST00000463479 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
PLOD3-210ENST00000463479 C5P01031 1676 aa18.03■□□□□ 0.48
PLOD3-210ENST00000463479 FYB1O15117 783 aa18.03■□□□□ 0.48
PLOD3-210ENST00000463479 ZEB1P37275 1124 aaPredicted RBP18.02■□□□□ 0.48
PLOD3-210ENST00000463479 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.48
PLOD3-210ENST00000463479 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
PLOD3-210ENST00000463479 TATP17735 454 aaPredicted RBP18.01■□□□□ 0.47
PLOD3-210ENST00000463479 SLC24A1O60721 1099 aa18■□□□□ 0.47
PLOD3-210ENST00000463479 PALLDQ8WX93 1383 aa18■□□□□ 0.47
PLOD3-210ENST00000463479 TAF1LQ8IZX4 1826 aa18■□□□□ 0.47
PLOD3-210ENST00000463479 PCDH11XQ9BZA7 1347 aa17.99■□□□□ 0.47
PLOD3-210ENST00000463479 PCDH11YQ9BZA8 1340 aa17.99■□□□□ 0.47
PLOD3-210ENST00000463479 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
PLOD3-210ENST00000463479 INSRP06213 1382 aa17.99■□□□□ 0.47
PLOD3-210ENST00000463479 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
PLOD3-210ENST00000463479 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
PLOD3-210ENST00000463479 CYP27B1O15528 508 aa17.97■□□□□ 0.47
PLOD3-210ENST00000463479 MPRIPQ6WCQ1 1025 aa17.97■□□□□ 0.47
PLOD3-210ENST00000463479 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
PLOD3-210ENST00000463479 FLT4P35916 1363 aa17.96■□□□□ 0.47
PLOD3-210ENST00000463479 C4BP0C0L5 1744 aa17.96■□□□□ 0.47
PLOD3-210ENST00000463479 TMF1P82094 1093 aa17.96■□□□□ 0.47
PLOD3-210ENST00000463479 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
PLOD3-210ENST00000463479 CD2APQ9Y5K6 639 aa17.96■□□□□ 0.47
PLOD3-210ENST00000463479 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
PLOD3-210ENST00000463479 ITGB4P16144 1822 aa17.95■□□□□ 0.46
PLOD3-210ENST00000463479 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
PLOD3-210ENST00000463479 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
PLOD3-210ENST00000463479 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
PLOD3-210ENST00000463479 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
PLOD3-210ENST00000463479 AK7Q96M32 723 aa17.93■□□□□ 0.46
PLOD3-210ENST00000463479 PHF14O94880 888 aa17.92■□□□□ 0.46
PLOD3-210ENST00000463479 HMGB2P26583 209 aaKnown RBP17.92■□□□□ 0.46
PLOD3-210ENST00000463479 SMARCC1Q92922 1105 aaPredicted RBP17.92■□□□□ 0.46
PLOD3-210ENST00000463479 EMILIN1Q9Y6C2 1016 aa17.92■□□□□ 0.46
PLOD3-210ENST00000463479 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
PLOD3-210ENST00000463479 PIGBQ92521 554 aa17.91■□□□□ 0.46
PLOD3-210ENST00000463479 ADCY9O60503 1353 aa17.91■□□□□ 0.46
PLOD3-210ENST00000463479 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
PLOD3-210ENST00000463479 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
PLOD3-210ENST00000463479 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
PLOD3-210ENST00000463479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.89■□□□□ 0.45
PLOD3-210ENST00000463479 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
PLOD3-210ENST00000463479 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
PLOD3-210ENST00000463479 IGSF1Q8N6C5 1336 aa17.89■□□□□ 0.45
PLOD3-210ENST00000463479 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.45
PLOD3-210ENST00000463479 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
PLOD3-210ENST00000463479 ANKRD26Q9UPS8 1709 aa17.87■□□□□ 0.45
PLOD3-210ENST00000463479 LOC102724428A0A0B4J2F2 783 aa17.87■□□□□ 0.45
PLOD3-210ENST00000463479 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
PLOD3-210ENST00000463479 SIK1P57059 783 aa17.87■□□□□ 0.45
PLOD3-210ENST00000463479 CDCA8Q53HL2 280 aa17.87■□□□□ 0.45
PLOD3-210ENST00000463479 LINC00116Q8NCU8 138 aa17.87■□□□□ 0.45
PLOD3-210ENST00000463479 ZNF526Q8TF50 670 aaPredicted RBP17.87■□□□□ 0.45
PLOD3-210ENST00000463479 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
PLOD3-210ENST00000463479 SSFA2P28290 1259 aa17.86■□□□□ 0.45
PLOD3-210ENST00000463479 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
PLOD3-210ENST00000463479 ITPK1Q13572 414 aa17.84■□□□□ 0.45
PLOD3-210ENST00000463479 EYA1Q99502 592 aa17.84■□□□□ 0.45
PLOD3-210ENST00000463479 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
PLOD3-210ENST00000463479 ASAP1Q9ULH1 1129 aa17.84■□□□□ 0.45
PLOD3-210ENST00000463479 WASHC2AQ641Q2 1341 aa17.83■□□□□ 0.44
PLOD3-210ENST00000463479 GNPATO15228 680 aa17.83■□□□□ 0.44
PLOD3-210ENST00000463479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
PLOD3-210ENST00000463479 PHKG2P15735 406 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms