RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 APAF1O14727 1248 aa9.68□□□□□ -0.86
EPHA4-210ENST00000463446 HMOX1P09601 288 aa9.68□□□□□ -0.86
EPHA4-210ENST00000463446 NFE2L2Q16236 605 aa9.68□□□□□ -0.86
EPHA4-210ENST00000463446 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
EPHA4-210ENST00000463446 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
EPHA4-210ENST00000463446 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
EPHA4-210ENST00000463446 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
EPHA4-210ENST00000463446 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
EPHA4-210ENST00000463446 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
EPHA4-210ENST00000463446 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
EPHA4-210ENST00000463446 ZBED9Q6R2W3 1325 aa9.66□□□□□ -0.86
EPHA4-210ENST00000463446 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
EPHA4-210ENST00000463446 MYH16Q9H6N6 1097 aa9.66□□□□□ -0.86
EPHA4-210ENST00000463446 IL16Q14005 1332 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 SPATA31A1Q5TZJ5 1347 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 SPATA31A5Q5VU36 1347 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 SPATA31A7Q8IWB4 1347 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 E9PSI1 815 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 GNAI1P63096 354 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 DCAF5Q96JK2 942 aa9.65□□□□□ -0.86
EPHA4-210ENST00000463446 GJD4Q96KN9 370 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-210ENST00000463446 LTN1O94822 1766 aa9.65□□□□□ -0.87
EPHA4-210ENST00000463446 COL5A2P05997 1499 aaPredicted RBP9.65□□□□□ -0.87
EPHA4-210ENST00000463446 AFF2P51816 1311 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 PCDH11XQ9BZA7 1347 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 PCDH11YQ9BZA8 1340 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-210ENST00000463446 NEUROD2Q15784 382 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 DDB1Q16531 1140 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 USP35Q9P2H5 1018 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 SLIT2O94813 1529 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 COL3A1P02461 1466 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-210ENST00000463446 FAM208AQ9UK61 1670 aaKnown RBP9.64□□□□□ -0.87
EPHA4-210ENST00000463446 CAMTA1Q9Y6Y1 1673 aa9.64□□□□□ -0.87
EPHA4-210ENST00000463446 ERVV-2B6SEH9 535 aa9.63□□□□□ -0.87
EPHA4-210ENST00000463446 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-210ENST00000463446 RBM6P78332 1123 aaKnown RBP9.63□□□□□ -0.87
EPHA4-210ENST00000463446 TEFQ10587 303 aa9.63□□□□□ -0.87
EPHA4-210ENST00000463446 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
EPHA4-210ENST00000463446 ZNF530Q6P9A1 599 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-210ENST00000463446 ZNF428Q96B54 188 aa9.63□□□□□ -0.87
EPHA4-210ENST00000463446 SOS1Q07889 1333 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-210ENST00000463446 RXRBP28702 533 aa9.62□□□□□ -0.87
EPHA4-210ENST00000463446 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-210ENST00000463446 TAF7Q15545 349 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-210ENST00000463446 PHACTR3Q96KR7 559 aa9.62□□□□□ -0.87
EPHA4-210ENST00000463446 YTHDC1Q96MU7 727 aaKnown RBP9.62□□□□□ -0.87
EPHA4-210ENST00000463446 NCAPD2Q15021 1401 aa9.62□□□□□ -0.87
EPHA4-210ENST00000463446 NWD2Q9ULI1 1742 aa9.62□□□□□ -0.87
EPHA4-210ENST00000463446 MARF1Q9Y4F3 1742 aaKnown RBP9.62□□□□□ -0.87
EPHA4-210ENST00000463446 AEBP1Q8IUX7 1158 aa9.61□□□□□ -0.87
EPHA4-210ENST00000463446 USHBP1Q8N6Y0 703 aa9.61□□□□□ -0.87
EPHA4-210ENST00000463446 CFAP44Q96MT7 982 aa9.61□□□□□ -0.87
EPHA4-210ENST00000463446 IFT57Q9NWB7 429 aa9.61□□□□□ -0.87
EPHA4-210ENST00000463446 COL18A1P39060 1754 aa9.6□□□□□ -0.87
EPHA4-210ENST00000463446 CRYBG1Q9Y4K1 1723 aa9.6□□□□□ -0.87
EPHA4-210ENST00000463446 A0A0G2JS52 829 aa9.6□□□□□ -0.87
EPHA4-210ENST00000463446 CABP4P57796 275 aa9.6□□□□□ -0.87
EPHA4-210ENST00000463446 MYT1Q01538 1121 aa9.6□□□□□ -0.87
EPHA4-210ENST00000463446 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
EPHA4-210ENST00000463446 MAP3K5Q99683 1374 aa9.6□□□□□ -0.87
EPHA4-210ENST00000463446 BCL9LQ86UU0 1499 aa9.59□□□□□ -0.87
EPHA4-210ENST00000463446 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
EPHA4-210ENST00000463446 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
EPHA4-210ENST00000463446 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
EPHA4-210ENST00000463446 PHKG2P15735 406 aa9.59□□□□□ -0.87
EPHA4-210ENST00000463446 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
EPHA4-210ENST00000463446 RNMTO43148 476 aaKnown RBP9.58□□□□□ -0.88
EPHA4-210ENST00000463446 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
EPHA4-210ENST00000463446 FAM196AQ6ZSG2 479 aa9.58□□□□□ -0.88
EPHA4-210ENST00000463446 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-210ENST00000463446 TRIM35Q9UPQ4 493 aa9.58□□□□□ -0.88
EPHA4-210ENST00000463446 ABCA3Q99758 1704 aa9.57□□□□□ -0.88
EPHA4-210ENST00000463446 CHL1O00533 1208 aa9.57□□□□□ -0.88
EPHA4-210ENST00000463446 SLFN5Q08AF3 891 aa9.57□□□□□ -0.88
EPHA4-210ENST00000463446 TTC5Q8N0Z6 440 aa9.57□□□□□ -0.88
EPHA4-210ENST00000463446 SMARCC1Q92922 1105 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-210ENST00000463446 RRP7AQ9Y3A4 280 aaKnown RBP9.57□□□□□ -0.88
EPHA4-210ENST00000463446 BTBD11A6QL63 1104 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 HOXB7P09629 217 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 MS4A1P11836 297 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-210ENST00000463446 SLC52A2Q9HAB3 445 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 TMOD3Q9NYL9 352 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
EPHA4-210ENST00000463446 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 ATRNO75882 1429 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
EPHA4-210ENST00000463446 CYP27B1O15528 508 aa9.55□□□□□ -0.88
EPHA4-210ENST00000463446 MPRIPQ6WCQ1 1025 aa9.55□□□□□ -0.88
EPHA4-210ENST00000463446 KRT27Q7Z3Y8 459 aa9.55□□□□□ -0.88
EPHA4-210ENST00000463446 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
EPHA4-210ENST00000463446 IL17REQ8NFR9 667 aa9.55□□□□□ -0.88
EPHA4-210ENST00000463446 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
EPHA4-210ENST00000463446 CEMIPQ8WUJ3 1361 aa9.54□□□□□ -0.88
EPHA4-210ENST00000463446 ZNF853P0CG23 659 aa9.54□□□□□ -0.88
EPHA4-210ENST00000463446 MCM10Q7L590 875 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms