RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 KDM2BQ8NHM5 1336 aa8.86□□□□□ -0.99
VAMP7-204ENST00000463317 EXOC5O00471 708 aa8.86□□□□□ -0.99
VAMP7-204ENST00000463317 SAFB2Q14151 953 aaKnown RBP eCLIP8.86□□□□□ -0.99
VAMP7-204ENST00000463317 TOM1L2Q6ZVM7 507 aa8.86□□□□□ -0.99
VAMP7-204ENST00000463317 CLEC11AQ9Y240 323 aa8.86□□□□□ -0.99
VAMP7-204ENST00000463317 KCNQ4P56696 695 aa8.85□□□□□ -0.99
VAMP7-204ENST00000463317 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
VAMP7-204ENST00000463317 AIDAQ96BJ3 306 aa8.85□□□□□ -0.99
VAMP7-204ENST00000463317 PRAM1Q96QH2 718 aa8.85□□□□□ -0.99
VAMP7-204ENST00000463317 MKRN1Q9UHC7 482 aaKnown RBP8.85□□□□□ -0.99
VAMP7-204ENST00000463317 WDR17Q8IZU2 1322 aa8.84□□□□□ -0.99
VAMP7-204ENST00000463317 GCP02774 474 aa8.84□□□□□ -0.99
VAMP7-204ENST00000463317 HSPA8P11142 646 aaKnown RBP8.84□□□□□ -0.99
VAMP7-204ENST00000463317 C9orf131Q5VYM1 1079 aa8.84□□□□□ -0.99
VAMP7-204ENST00000463317 PKD1L3Q7Z443 1732 aa8.84□□□□□ -0.99
VAMP7-204ENST00000463317 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
VAMP7-204ENST00000463317 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
VAMP7-204ENST00000463317 EIF3AQ14152 1382 aaKnown RBP8.84□□□□□ -0.99
VAMP7-204ENST00000463317 PIK3C2GO75747 1445 aa8.83□□□□□ -1
VAMP7-204ENST00000463317 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
VAMP7-204ENST00000463317 PIP4P2Q8N4L2 257 aa8.83□□□□□ -1
VAMP7-204ENST00000463317 CREBZFQ9NS37 354 aa8.83□□□□□ -1
VAMP7-204ENST00000463317 ROCK1Q13464 1354 aa8.83□□□□□ -1
VAMP7-204ENST00000463317 QRICH2Q9H0J4 1663 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 COL18A1P39060 1754 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 ABCC6O95255 1503 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 SPDYE4A6NLX3 237 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 ARHGAP27Q6ZUM4 889 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 CNTNAP1P78357 1384 aa8.82□□□□□ -1
VAMP7-204ENST00000463317 KIAA1551Q9HCM1 1747 aa8.81□□□□□ -1
VAMP7-204ENST00000463317 LY75O60449 1722 aa8.8□□□□□ -1
VAMP7-204ENST00000463317 ABTB2Q8N961 1025 aa8.8□□□□□ -1
VAMP7-204ENST00000463317 AXIN2Q9Y2T1 843 aa8.8□□□□□ -1
VAMP7-204ENST00000463317 VIRMAQ69YN4 1812 aaKnown RBP8.8□□□□□ -1
VAMP7-204ENST00000463317 KAT6BQ8WYB5 2073 aa8.79□□□□□ -1
VAMP7-204ENST00000463317 POLR3AO14802 1390 aaPredicted RBP8.79□□□□□ -1
VAMP7-204ENST00000463317 WASLO00401 505 aaPredicted RBP8.79□□□□□ -1
VAMP7-204ENST00000463317 FXR2P51116 673 aaKnown RBP eCLIP8.79□□□□□ -1
VAMP7-204ENST00000463317 FAM50AQ14320 339 aaKnown RBP8.79□□□□□ -1
VAMP7-204ENST00000463317 BCS1LQ9Y276 419 aa8.79□□□□□ -1
VAMP7-204ENST00000463317 USP54Q70EL1 1684 aa8.78□□□□□ -1
VAMP7-204ENST00000463317 ITSN1Q15811 1721 aa8.78□□□□□ -1
VAMP7-204ENST00000463317 VEGFBP49765 207 aa8.78□□□□□ -1
VAMP7-204ENST00000463317 NLRP13Q86W25 1043 aa8.78□□□□□ -1
VAMP7-204ENST00000463317 C14orf93Q9H972 538 aaKnown RBP8.78□□□□□ -1
VAMP7-204ENST00000463317 POGKQ9P215 609 aa8.78□□□□□ -1
VAMP7-204ENST00000463317 PPIP5K1Q6PFW1 1433 aa8.78□□□□□ -1
VAMP7-204ENST00000463317 CCDC7Q96M83 1385 aa8.77□□□□□ -1.01
VAMP7-204ENST00000463317 ZBTB7CA1YPR0 619 aa8.77□□□□□ -1.01
VAMP7-204ENST00000463317 VEGFAP15692 232 aaPredicted RBP8.77□□□□□ -1.01
VAMP7-204ENST00000463317 CFAP44Q96MT7 982 aa8.77□□□□□ -1.01
VAMP7-204ENST00000463317 KIF13BQ9NQT8 1826 aa8.77□□□□□ -1.01
VAMP7-204ENST00000463317 MINK1Q8N4C8 1332 aaPredicted RBP8.77□□□□□ -1.01
VAMP7-204ENST00000463317 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
VAMP7-204ENST00000463317 RNF181Q9P0P0 153 aa8.76□□□□□ -1.01
VAMP7-204ENST00000463317 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
VAMP7-204ENST00000463317 SLIT3O75094 1523 aa8.75□□□□□ -1.01
VAMP7-204ENST00000463317 NUDT16Q96DE0 195 aaKnown RBP8.75□□□□□ -1.01
VAMP7-204ENST00000463317 CCNL1Q9UK58 526 aaPredicted RBP8.75□□□□□ -1.01
VAMP7-204ENST00000463317 A0A0C4DFX4 3053 aa8.75□□□□□ -1.01
VAMP7-204ENST00000463317 ACEP12821 1306 aa8.75□□□□□ -1.01
VAMP7-204ENST00000463317 BRCA1P38398 1863 aaKnown RBP8.74□□□□□ -1.01
VAMP7-204ENST00000463317 RGPD5Q99666 1765 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 SPATA31E1Q6ZUB1 1445 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 A0A0G2JLW4 131 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 DLL1O00548 723 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 FCHSD2O94868 740 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 TGFB2P61812 414 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 ARFGEF1Q9Y6D6 1849 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 SBF1O95248 1867 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 ERBB3P21860 1342 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 CUL9Q8IWT3 2517 aa8.74□□□□□ -1.01
VAMP7-204ENST00000463317 NSD2O96028 1365 aa8.73□□□□□ -1.01
VAMP7-204ENST00000463317 POTECB2RU33 542 aa8.73□□□□□ -1.01
VAMP7-204ENST00000463317 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
VAMP7-204ENST00000463317 CFAP70Q5T0N1 1121 aa8.73□□□□□ -1.01
VAMP7-204ENST00000463317 SMIM5Q71RC9 77 aa8.73□□□□□ -1.01
VAMP7-204ENST00000463317 MCOLN1Q9GZU1 580 aa8.73□□□□□ -1.01
VAMP7-204ENST00000463317 ZC3H4Q9UPT8 1303 aaKnown RBP8.73□□□□□ -1.01
VAMP7-204ENST00000463317 CPSF1Q10570 1443 aaKnown RBP8.72□□□□□ -1.01
VAMP7-204ENST00000463317 GLTPD2A6NH11 291 aa8.72□□□□□ -1.01
VAMP7-204ENST00000463317 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
VAMP7-204ENST00000463317 MAP2K1Q02750 393 aaPredicted RBP8.72□□□□□ -1.01
VAMP7-204ENST00000463317 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
VAMP7-204ENST00000463317 AMIGO3Q86WK7 504 aa8.72□□□□□ -1.01
VAMP7-204ENST00000463317 C5P01031 1676 aa8.72□□□□□ -1.01
VAMP7-204ENST00000463317 TOGARAM1Q9Y4F4 1720 aa8.71□□□□□ -1.01
VAMP7-204ENST00000463317 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
VAMP7-204ENST00000463317 PRKAR2AP13861 404 aaKnown RBP8.71□□□□□ -1.02
VAMP7-204ENST00000463317 DPEP1P16444 411 aa8.71□□□□□ -1.02
VAMP7-204ENST00000463317 HABP4Q5JVS0 413 aaKnown RBP8.71□□□□□ -1.02
VAMP7-204ENST00000463317 ARHGEF25Q86VW2 580 aa8.71□□□□□ -1.02
VAMP7-204ENST00000463317 GCC1Q96CN9 775 aa8.71□□□□□ -1.02
VAMP7-204ENST00000463317 IL2RBP14784 551 aa8.7□□□□□ -1.02
VAMP7-204ENST00000463317 PRIM1P49642 420 aaKnown RBP8.7□□□□□ -1.02
VAMP7-204ENST00000463317 CHADLQ6NUI6 762 aa8.7□□□□□ -1.02
VAMP7-204ENST00000463317 SP7Q8TDD2 431 aaPredicted RBP8.7□□□□□ -1.02
VAMP7-204ENST00000463317 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
VAMP7-204ENST00000463317 PASKQ96RG2 1323 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms