RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 NSD2O96028 1365 aa11.81□□□□□ -0.52
TMEM254-208ENST00000463209 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
TMEM254-208ENST00000463209 PKD1L3Q7Z443 1732 aa11.8□□□□□ -0.52
TMEM254-208ENST00000463209 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
TMEM254-208ENST00000463209 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
TMEM254-208ENST00000463209 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
TMEM254-208ENST00000463209 EIF4A2Q14240 407 aaKnown RBP11.79□□□□□ -0.52
TMEM254-208ENST00000463209 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
TMEM254-208ENST00000463209 EYA1Q99502 592 aa11.79□□□□□ -0.52
TMEM254-208ENST00000463209 TOGARAM1Q9Y4F4 1720 aa11.79□□□□□ -0.52
TMEM254-208ENST00000463209 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
TMEM254-208ENST00000463209 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
TMEM254-208ENST00000463209 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
TMEM254-208ENST00000463209 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
TMEM254-208ENST00000463209 BCL9O00512 1426 aa11.77□□□□□ -0.52
TMEM254-208ENST00000463209 NCAPD2Q15021 1401 aa11.77□□□□□ -0.52
TMEM254-208ENST00000463209 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
TMEM254-208ENST00000463209 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
TMEM254-208ENST00000463209 KAT6BQ8WYB5 2073 aa11.76□□□□□ -0.53
TMEM254-208ENST00000463209 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
TMEM254-208ENST00000463209 PROM2Q8N271 834 aa11.75□□□□□ -0.53
TMEM254-208ENST00000463209 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
TMEM254-208ENST00000463209 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
TMEM254-208ENST00000463209 PRIM1P49642 420 aaKnown RBP11.74□□□□□ -0.53
TMEM254-208ENST00000463209 KCNQ4P56696 695 aa11.74□□□□□ -0.53
TMEM254-208ENST00000463209 CYP27B1O15528 508 aa11.73□□□□□ -0.53
TMEM254-208ENST00000463209 ITGB4P16144 1822 aa11.73□□□□□ -0.53
TMEM254-208ENST00000463209 MTHFSP49914 203 aa11.73□□□□□ -0.53
TMEM254-208ENST00000463209 IGSF1Q8N6C5 1336 aa11.73□□□□□ -0.53
TMEM254-208ENST00000463209 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
TMEM254-208ENST00000463209 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
TMEM254-208ENST00000463209 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
TMEM254-208ENST00000463209 KCNA4P22459 653 aa11.72□□□□□ -0.53
TMEM254-208ENST00000463209 TXNRD1Q16881 649 aa11.72□□□□□ -0.53
TMEM254-208ENST00000463209 LY75O60449 1722 aa11.72□□□□□ -0.53
TMEM254-208ENST00000463209 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
TMEM254-208ENST00000463209 PLSCR1O15162 318 aa11.71□□□□□ -0.53
TMEM254-208ENST00000463209 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
TMEM254-208ENST00000463209 LRP5O75197 1615 aa11.71□□□□□ -0.54
TMEM254-208ENST00000463209 CASZ1Q86V15 1759 aa11.7□□□□□ -0.54
TMEM254-208ENST00000463209 IL13P35225 146 aa11.7□□□□□ -0.54
TMEM254-208ENST00000463209 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
TMEM254-208ENST00000463209 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
TMEM254-208ENST00000463209 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
TMEM254-208ENST00000463209 HMOX1P09601 288 aa11.69□□□□□ -0.54
TMEM254-208ENST00000463209 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
TMEM254-208ENST00000463209 MPRIPQ6WCQ1 1025 aa11.69□□□□□ -0.54
TMEM254-208ENST00000463209 LRRC4BQ9NT99 713 aa11.69□□□□□ -0.54
TMEM254-208ENST00000463209 SPG7Q9UQ90 795 aa11.69□□□□□ -0.54
TMEM254-208ENST00000463209 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
TMEM254-208ENST00000463209 PHKG2P15735 406 aa11.68□□□□□ -0.54
TMEM254-208ENST00000463209 ZNF827Q17R98 1081 aa11.68□□□□□ -0.54
TMEM254-208ENST00000463209 MSH5O43196 834 aa11.67□□□□□ -0.54
TMEM254-208ENST00000463209 C5P01031 1676 aa11.67□□□□□ -0.54
TMEM254-208ENST00000463209 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
TMEM254-208ENST00000463209 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-208ENST00000463209 STK32BQ9NY57 414 aa11.66□□□□□ -0.54
TMEM254-208ENST00000463209 KDM6AO15550 1401 aaPredicted RBP11.66□□□□□ -0.54
TMEM254-208ENST00000463209 PALLDQ8WX93 1383 aa11.66□□□□□ -0.54
TMEM254-208ENST00000463209 SRCAPQ6ZRS2 3230 aa11.65□□□□□ -0.54
TMEM254-208ENST00000463209 DIAPH1O60610 1272 aaKnown RBP11.65□□□□□ -0.54
TMEM254-208ENST00000463209 PPP2R1AP30153 589 aa11.65□□□□□ -0.54
TMEM254-208ENST00000463209 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
TMEM254-208ENST00000463209 PIGBQ92521 554 aa11.65□□□□□ -0.54
TMEM254-208ENST00000463209 KDRP35968 1356 aa11.65□□□□□ -0.55
TMEM254-208ENST00000463209 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.55
TMEM254-208ENST00000463209 ZBTB7AO95365 584 aa11.64□□□□□ -0.55
TMEM254-208ENST00000463209 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
TMEM254-208ENST00000463209 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-208ENST00000463209 SLC15A2Q16348 729 aa11.64□□□□□ -0.55
TMEM254-208ENST00000463209 PLEKHO1Q53GL0 409 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-208ENST00000463209 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
TMEM254-208ENST00000463209 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
TMEM254-208ENST00000463209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMEM254-208ENST00000463209 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
TMEM254-208ENST00000463209 SMIM5Q71RC9 77 aa11.62□□□□□ -0.55
TMEM254-208ENST00000463209 TMOD3Q9NYL9 352 aa11.62□□□□□ -0.55
TMEM254-208ENST00000463209 ASAP1Q9ULH1 1129 aa11.62□□□□□ -0.55
TMEM254-208ENST00000463209 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
TMEM254-208ENST00000463209 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
TMEM254-208ENST00000463209 QSER1Q2KHR3 1735 aa11.61□□□□□ -0.55
TMEM254-208ENST00000463209 C1orf141Q5JVX7 400 aa11.61□□□□□ -0.55
TMEM254-208ENST00000463209 SLC27A3Q5K4L6 730 aa11.61□□□□□ -0.55
TMEM254-208ENST00000463209 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
TMEM254-208ENST00000463209 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
TMEM254-208ENST00000463209 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
TMEM254-208ENST00000463209 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
TMEM254-208ENST00000463209 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
TMEM254-208ENST00000463209 AMIGO3Q86WK7 504 aa11.59□□□□□ -0.55
TMEM254-208ENST00000463209 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
TMEM254-208ENST00000463209 CFAP53Q96M91 514 aa11.59□□□□□ -0.55
TMEM254-208ENST00000463209 LGR6Q9HBX8 967 aa11.59□□□□□ -0.55
TMEM254-208ENST00000463209 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
TMEM254-208ENST00000463209 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 U2AF1L5P0DN76 240 aaPredicted RBP11.58□□□□□ -0.56
TMEM254-208ENST00000463209 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 CABP4P57796 275 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 U2AF1Q01081 240 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM254-208ENST00000463209 ITPK1Q13572 414 aa11.58□□□□□ -0.56
TMEM254-208ENST00000463209 LINC00116Q8NCU8 138 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms