RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
HDAC1-203ENST00000463172 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
HDAC1-203ENST00000463172 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
HDAC1-203ENST00000463172 POLKQ9UBT6 870 aa17.89■□□□□ 0.45
HDAC1-203ENST00000463172 LRP5O75197 1615 aa17.89■□□□□ 0.45
HDAC1-203ENST00000463172 SRCAPQ6ZRS2 3230 aa17.89■□□□□ 0.45
HDAC1-203ENST00000463172 MEGF6O75095 1541 aa17.88■□□□□ 0.45
HDAC1-203ENST00000463172 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
HDAC1-203ENST00000463172 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
HDAC1-203ENST00000463172 BTAF1O14981 1849 aa17.88■□□□□ 0.45
HDAC1-203ENST00000463172 KCNQ2O43526 872 aa17.87■□□□□ 0.45
HDAC1-203ENST00000463172 TXNRD1Q16881 649 aa17.86■□□□□ 0.45
HDAC1-203ENST00000463172 PTF1AQ7RTS3 328 aa17.86■□□□□ 0.45
HDAC1-203ENST00000463172 SYTL4Q96C24 671 aaPredicted RBP17.86■□□□□ 0.45
HDAC1-203ENST00000463172 SHANK3Q9BYB0 1731 aa17.85■□□□□ 0.45
HDAC1-203ENST00000463172 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
HDAC1-203ENST00000463172 SPG7Q9UQ90 795 aa17.85■□□□□ 0.45
HDAC1-203ENST00000463172 DOT1LQ8TEK3 1739 aa17.84■□□□□ 0.45
HDAC1-203ENST00000463172 HMGB2P26583 209 aaKnown RBP17.83■□□□□ 0.44
HDAC1-203ENST00000463172 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
HDAC1-203ENST00000463172 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
HDAC1-203ENST00000463172 EYA1Q99502 592 aa17.82■□□□□ 0.44
HDAC1-203ENST00000463172 NCAPD2Q15021 1401 aa17.81■□□□□ 0.44
HDAC1-203ENST00000463172 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
HDAC1-203ENST00000463172 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
HDAC1-203ENST00000463172 SLC27A3Q5K4L6 730 aa17.81■□□□□ 0.44
HDAC1-203ENST00000463172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.81■□□□□ 0.443e-7■□□□□ 8.6
HDAC1-203ENST00000463172 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
HDAC1-203ENST00000463172 PROM2Q8N271 834 aa17.8■□□□□ 0.44
HDAC1-203ENST00000463172 SPON1Q9HCB6 807 aa17.79■□□□□ 0.44
HDAC1-203ENST00000463172 SLC15A2Q16348 729 aa17.78■□□□□ 0.44
HDAC1-203ENST00000463172 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.44
HDAC1-203ENST00000463172 IGSF1Q8N6C5 1336 aa17.76■□□□□ 0.43
HDAC1-203ENST00000463172 IFNL2Q8IZJ0 200 aa17.76■□□□□ 0.43
HDAC1-203ENST00000463172 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
HDAC1-203ENST00000463172 NPC1L1Q9UHC9 1359 aa17.76■□□□□ 0.43
HDAC1-203ENST00000463172 CYP27B1O15528 508 aa17.75■□□□□ 0.43
HDAC1-203ENST00000463172 CC2D1BQ5T0F9 858 aaKnown RBP17.75■□□□□ 0.43
HDAC1-203ENST00000463172 LY75O60449 1722 aa17.75■□□□□ 0.43
HDAC1-203ENST00000463172 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-203ENST00000463172 HSP90AB1P08238 724 aaKnown RBP17.74■□□□□ 0.43
HDAC1-203ENST00000463172 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
HDAC1-203ENST00000463172 PLEKHO1Q53GL0 409 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-203ENST00000463172 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
HDAC1-203ENST00000463172 ITGB4P16144 1822 aa17.73■□□□□ 0.43
HDAC1-203ENST00000463172 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
HDAC1-203ENST00000463172 MPRIPQ6WCQ1 1025 aa17.73■□□□□ 0.43
HDAC1-203ENST00000463172 CCNL1Q9UK58 526 aaPredicted RBP17.73■□□□□ 0.43
HDAC1-203ENST00000463172 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
HDAC1-203ENST00000463172 PAPPAQ13219 1627 aa17.72■□□□□ 0.43
HDAC1-203ENST00000463172 PHKG2P15735 406 aa17.71■□□□□ 0.43
HDAC1-203ENST00000463172 MTHFSP49914 203 aa17.71■□□□□ 0.43
HDAC1-203ENST00000463172 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
HDAC1-203ENST00000463172 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
HDAC1-203ENST00000463172 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
HDAC1-203ENST00000463172 IL13P35225 146 aa17.69■□□□□ 0.42
HDAC1-203ENST00000463172 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
HDAC1-203ENST00000463172 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
HDAC1-203ENST00000463172 MTFR1LQ9H019 292 aa17.69■□□□□ 0.42
HDAC1-203ENST00000463172 TFCP2L1Q9NZI6 479 aa17.69■□□□□ 0.42
HDAC1-203ENST00000463172 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
HDAC1-203ENST00000463172 ZNF530Q6P9A1 599 aaPredicted RBP17.68■□□□□ 0.42
HDAC1-203ENST00000463172 TOGARAM1Q9Y4F4 1720 aa17.68■□□□□ 0.42
HDAC1-203ENST00000463172 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
HDAC1-203ENST00000463172 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
HDAC1-203ENST00000463172 ZBTB7AO95365 584 aa17.67■□□□□ 0.42
HDAC1-203ENST00000463172 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
HDAC1-203ENST00000463172 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
HDAC1-203ENST00000463172 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
HDAC1-203ENST00000463172 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
HDAC1-203ENST00000463172 ERVV-2B6SEH9 535 aa17.66■□□□□ 0.42
HDAC1-203ENST00000463172 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
HDAC1-203ENST00000463172 PIGBQ92521 554 aa17.66■□□□□ 0.42
HDAC1-203ENST00000463172 CFAP53Q96M91 514 aa17.66■□□□□ 0.42
HDAC1-203ENST00000463172 KDRP35968 1356 aa17.66■□□□□ 0.42
HDAC1-203ENST00000463172 C5P01031 1676 aa17.65■□□□□ 0.42
HDAC1-203ENST00000463172 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
HDAC1-203ENST00000463172 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
HDAC1-203ENST00000463172 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
HDAC1-203ENST00000463172 KCNQ4P56696 695 aa17.63■□□□□ 0.41
HDAC1-203ENST00000463172 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
HDAC1-203ENST00000463172 TAF1LQ8IZX4 1826 aa17.63■□□□□ 0.41
HDAC1-203ENST00000463172 POLD1P28340 1107 aa17.62■□□□□ 0.41
HDAC1-203ENST00000463172 CABP4P57796 275 aa17.62■□□□□ 0.41
HDAC1-203ENST00000463172 MSH5O43196 834 aa17.61■□□□□ 0.41
HDAC1-203ENST00000463172 AK7Q96M32 723 aa17.61■□□□□ 0.41
HDAC1-203ENST00000463172 TUBGCP6Q96RT7 1819 aa17.61■□□□□ 0.41
HDAC1-203ENST00000463172 LOC102724428A0A0B4J2F2 783 aa17.6■□□□□ 0.41
HDAC1-203ENST00000463172 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
HDAC1-203ENST00000463172 HMOX1P09601 288 aa17.6■□□□□ 0.41
HDAC1-203ENST00000463172 SIK1P57059 783 aa17.6■□□□□ 0.41
HDAC1-203ENST00000463172 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
HDAC1-203ENST00000463172 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
HDAC1-203ENST00000463172 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
HDAC1-203ENST00000463172 PTGER2P43116 358 aa17.58■□□□□ 0.4
HDAC1-203ENST00000463172 ARXQ96QS3 562 aa17.58■□□□□ 0.4
HDAC1-203ENST00000463172 ASAP1Q9ULH1 1129 aa17.58■□□□□ 0.4
HDAC1-203ENST00000463172 C4BP0C0L5 1744 aa17.58■□□□□ 0.4
HDAC1-203ENST00000463172 ATP6V1AP38606 617 aa17.57■□□□□ 0.4
HDAC1-203ENST00000463172 ATG3Q9NT62 314 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms