RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
USH2A-203ENST00000463147 H7C1W4 665 aa9.39□□□□□ -0.91
USH2A-203ENST00000463147 RAB15P59190 212 aa9.39□□□□□ -0.91
USH2A-203ENST00000463147 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
USH2A-203ENST00000463147 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
USH2A-203ENST00000463147 LRRC4BQ9NT99 713 aa9.38□□□□□ -0.91
USH2A-203ENST00000463147 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
USH2A-203ENST00000463147 BEND7Q8N7W2 519 aaPredicted RBP9.37□□□□□ -0.91
USH2A-203ENST00000463147 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
USH2A-203ENST00000463147 NSFL1CQ9UNZ2 370 aaKnown RBP9.37□□□□□ -0.91
USH2A-203ENST00000463147 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
USH2A-203ENST00000463147 GAS6Q14393 721 aa9.36□□□□□ -0.91
USH2A-203ENST00000463147 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
USH2A-203ENST00000463147 TRERF1Q96PN7 1200 aa9.36□□□□□ -0.91
USH2A-203ENST00000463147 USP17L8P0C7I0 530 aa9.35□□□□□ -0.91
USH2A-203ENST00000463147 PRICKLE2Q7Z3G6 844 aa9.35□□□□□ -0.91
USH2A-203ENST00000463147 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
USH2A-203ENST00000463147 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
USH2A-203ENST00000463147 DYRK1BQ9Y463 629 aa9.35□□□□□ -0.91
USH2A-203ENST00000463147 BCRP11274 1271 aa9.34□□□□□ -0.91
USH2A-203ENST00000463147 RNF20Q5VTR2 975 aa9.34□□□□□ -0.91
USH2A-203ENST00000463147 MSTNO14793 375 aa9.33□□□□□ -0.92
USH2A-203ENST00000463147 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
USH2A-203ENST00000463147 NEDD1Q8NHV4 660 aa9.33□□□□□ -0.92
USH2A-203ENST00000463147 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
USH2A-203ENST00000463147 CUEDC1Q9NWM3 386 aaPredicted RBP9.33□□□□□ -0.92
USH2A-203ENST00000463147 IGF1RP08069 1367 aa9.33□□□□□ -0.92
USH2A-203ENST00000463147 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
USH2A-203ENST00000463147 RIPOR1Q6ZS17 1223 aa9.32□□□□□ -0.92
USH2A-203ENST00000463147 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
USH2A-203ENST00000463147 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
USH2A-203ENST00000463147 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
USH2A-203ENST00000463147 ZBBXA8MT70 800 aa9.3□□□□□ -0.92
USH2A-203ENST00000463147 MEN1O00255 615 aa9.3□□□□□ -0.92
USH2A-203ENST00000463147 RHOQP17081 205 aa9.3□□□□□ -0.92
USH2A-203ENST00000463147 SLC27A3Q5K4L6 730 aa9.3□□□□□ -0.92
USH2A-203ENST00000463147 DBN1Q16643 649 aa9.29□□□□□ -0.92
USH2A-203ENST00000463147 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
USH2A-203ENST00000463147 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
USH2A-203ENST00000463147 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
USH2A-203ENST00000463147 CYP2U1Q7Z449 544 aa9.29□□□□□ -0.92
USH2A-203ENST00000463147 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
USH2A-203ENST00000463147 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
USH2A-203ENST00000463147 A0A1W2PRU2 124 aa9.28□□□□□ -0.92
USH2A-203ENST00000463147 RFC5P40937 340 aa9.28□□□□□ -0.92
USH2A-203ENST00000463147 PLA2G4EQ3MJ16 856 aa9.28□□□□□ -0.92
USH2A-203ENST00000463147 FAM117AQ9C073 453 aa9.28□□□□□ -0.92
USH2A-203ENST00000463147 ESF1Q9H501 851 aaKnown RBP9.28□□□□□ -0.92
USH2A-203ENST00000463147 MX2P20592 715 aa9.27□□□□□ -0.93
USH2A-203ENST00000463147 MAP2K3P46734 347 aa9.27□□□□□ -0.93
USH2A-203ENST00000463147 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
USH2A-203ENST00000463147 ALYREFQ86V81 257 aaKnown RBP9.27□□□□□ -0.93
USH2A-203ENST00000463147 GAS2L1Q99501 681 aaPredicted RBP9.27□□□□□ -0.93
USH2A-203ENST00000463147 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
USH2A-203ENST00000463147 PCDHB9Q9Y5E1 797 aa9.27□□□□□ -0.93
USH2A-203ENST00000463147 CNTNAP5Q8WYK1 1306 aa9.27□□□□□ -0.93
USH2A-203ENST00000463147 SPATA31C2B4DYI2 1134 aa9.26□□□□□ -0.93
USH2A-203ENST00000463147 GPR25O00155 361 aa9.26□□□□□ -0.93
USH2A-203ENST00000463147 GIGYF1O75420 1035 aaPredicted RBP9.26□□□□□ -0.93
USH2A-203ENST00000463147 CLN3Q13286 438 aa9.26□□□□□ -0.93
USH2A-203ENST00000463147 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
USH2A-203ENST00000463147 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
USH2A-203ENST00000463147 ADAM23O75077 832 aa9.25□□□□□ -0.93
USH2A-203ENST00000463147 GALNT6Q8NCL4 622 aa9.25□□□□□ -0.93
USH2A-203ENST00000463147 ACDQ96AP0 544 aa9.25□□□□□ -0.93
USH2A-203ENST00000463147 SPOCK3Q9BQ16 436 aa9.25□□□□□ -0.93
USH2A-203ENST00000463147 GRIP2Q9C0E4 1043 aa9.25□□□□□ -0.93
USH2A-203ENST00000463147 F11P03951 625 aa9.24□□□□□ -0.93
USH2A-203ENST00000463147 POU4F2Q12837 409 aa9.24□□□□□ -0.93
USH2A-203ENST00000463147 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
USH2A-203ENST00000463147 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
USH2A-203ENST00000463147 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
USH2A-203ENST00000463147 NUCKS1Q9H1E3 243 aaKnown RBP9.24□□□□□ -0.93
USH2A-203ENST00000463147 PHF24Q9UPV7 400 aa9.24□□□□□ -0.93
USH2A-203ENST00000463147 OIP5O43482 229 aa9.23□□□□□ -0.93
USH2A-203ENST00000463147 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
USH2A-203ENST00000463147 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
USH2A-203ENST00000463147 GPBP1L1Q9HC44 474 aaPredicted RBP9.23□□□□□ -0.93
USH2A-203ENST00000463147 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
USH2A-203ENST00000463147 PCMTD1Q96MG8 357 aaPredicted RBP9.22□□□□□ -0.93
USH2A-203ENST00000463147 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
USH2A-203ENST00000463147 WASLO00401 505 aaPredicted RBP9.21□□□□□ -0.94
USH2A-203ENST00000463147 LBRQ14739 615 aaKnown RBP9.21□□□□□ -0.94
USH2A-203ENST00000463147 OXCT2Q9BYC2 517 aaPredicted RBP9.21□□□□□ -0.94
USH2A-203ENST00000463147 PIK3R2O00459 728 aa9.2□□□□□ -0.94
USH2A-203ENST00000463147 FBXO45P0C2W1 286 aa9.2□□□□□ -0.94
USH2A-203ENST00000463147 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
USH2A-203ENST00000463147 MKL2Q9ULH7 1088 aa9.2□□□□□ -0.94
USH2A-203ENST00000463147 GTF2E1P29083 439 aaPredicted RBP9.19□□□□□ -0.94
USH2A-203ENST00000463147 GNRH1P01148 92 aa9.18□□□□□ -0.94
USH2A-203ENST00000463147 NR1H3Q13133 447 aa9.18□□□□□ -0.94
USH2A-203ENST00000463147 A0A1B0GTH6 734 aa9.17□□□□□ -0.94
USH2A-203ENST00000463147 TRAK2O60296 914 aa9.17□□□□□ -0.94
USH2A-203ENST00000463147 PROCP04070 461 aa9.17□□□□□ -0.94
USH2A-203ENST00000463147 PCDHB11Q9Y5F2 797 aa9.17□□□□□ -0.94
USH2A-203ENST00000463147 SOCS7O14512 581 aa9.16□□□□□ -0.94
USH2A-203ENST00000463147 ESYT1Q9BSJ8 1104 aa9.16□□□□□ -0.94
USH2A-203ENST00000463147 ARHGEF10LQ9HCE6 1279 aa9.16□□□□□ -0.94
USH2A-203ENST00000463147 K7ELQ4 463 aaPredicted RBP9.15□□□□□ -0.94
USH2A-203ENST00000463147 APBB1O00213 710 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms