RNA–Protein interactions for RNA: ENST00000463095.2

PCDH15-221, Transcript of protocadherin related 15, humanhuman

TSL 1 (best)

Gene PCDH15, Length 3,469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-221ENST00000463095 SALL3Q9BXA9 1300 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 NPATQ14207 1427 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 ATP2B3Q16720 1220 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
PCDH15-221ENST00000463095 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 RIMBP3CA6NJZ7 1639 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 RIMBP3BA6NNM3 1639 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 RIMBP3Q9UFD9 1639 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 NALCNQ8IZF0 1738 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 C3P01024 1663 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 SSH2Q76I76 1423 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 MYH15Q9Y2K3 1946 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 EPB41L2O43491 1005 aaKnown RBP10.38□□□□□ -0.75
PCDH15-221ENST00000463095 RBM27Q9P2N5 1060 aaKnown RBP10.38□□□□□ -0.75
PCDH15-221ENST00000463095 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
PCDH15-221ENST00000463095 FAM208AQ9UK61 1670 aaKnown RBP10.37□□□□□ -0.75
PCDH15-221ENST00000463095 NEUROD2Q15784 382 aa10.37□□□□□ -0.75
PCDH15-221ENST00000463095 ZGPATQ8N5A5 531 aaKnown RBP10.37□□□□□ -0.75
PCDH15-221ENST00000463095 INTS3Q68E01 1043 aaKnown RBP10.37□□□□□ -0.75
PCDH15-221ENST00000463095 PRPF40AO75400 957 aaKnown RBP10.36□□□□□ -0.75
PCDH15-221ENST00000463095 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCDH15-221ENST00000463095 DLC1Q96QB1 1528 aa10.36□□□□□ -0.75
PCDH15-221ENST00000463095 SPAG9O60271 1321 aaKnown RBP10.36□□□□□ -0.75
PCDH15-221ENST00000463095 SYCE3A1L190 88 aa10.36□□□□□ -0.75
PCDH15-221ENST00000463095 FCHSD2O94868 740 aa10.36□□□□□ -0.75
PCDH15-221ENST00000463095 ANKRD45Q5TZF3 282 aa10.35□□□□□ -0.75
PCDH15-221ENST00000463095 KIAA1524Q8TCG1 905 aa10.35□□□□□ -0.75
PCDH15-221ENST00000463095 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
PCDH15-221ENST00000463095 TAF3Q5VWG9 929 aa10.35□□□□□ -0.75
PCDH15-221ENST00000463095 FEZ1Q99689 392 aa10.35□□□□□ -0.75
PCDH15-221ENST00000463095 ATP7BP35670 1465 aa10.35□□□□□ -0.75
PCDH15-221ENST00000463095 U2AF1L5P0DN76 240 aaPredicted RBP10.34□□□□□ -0.75
PCDH15-221ENST00000463095 MCM2P49736 904 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 U2AF1Q01081 240 aaKnown RBP eCLIP10.34□□□□□ -0.75
PCDH15-221ENST00000463095 TSPY26PQ9H489 355 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 SLC20A2Q08357 652 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 BCL2L12Q9HB09 334 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 ANAPC15P60006 121 aa10.34□□□□□ -0.75
PCDH15-221ENST00000463095 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
PCDH15-221ENST00000463095 YTHDC2Q9H6S0 1430 aaKnown RBP10.33□□□□□ -0.76
PCDH15-221ENST00000463095 EVC2Q86UK5 1308 aa10.33□□□□□ -0.76
PCDH15-221ENST00000463095 MLH3Q9UHC1 1453 aa10.33□□□□□ -0.76
PCDH15-221ENST00000463095 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
PCDH15-221ENST00000463095 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
PCDH15-221ENST00000463095 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
PCDH15-221ENST00000463095 SDSP20132 328 aa10.32□□□□□ -0.76
PCDH15-221ENST00000463095 KCNF1Q9H3M0 494 aa10.32□□□□□ -0.76
PCDH15-221ENST00000463095 FYB1O15117 783 aa10.32□□□□□ -0.76
PCDH15-221ENST00000463095 ST18O60284 1047 aa10.32□□□□□ -0.76
PCDH15-221ENST00000463095 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
PCDH15-221ENST00000463095 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
PCDH15-221ENST00000463095 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
PCDH15-221ENST00000463095 FAM193AP78312 1265 aa10.31□□□□□ -0.76
PCDH15-221ENST00000463095 ZHX1Q9UKY1 873 aaPredicted RBP10.31□□□□□ -0.76
PCDH15-221ENST00000463095 TMX3Q96JJ7 454 aa10.31□□□□□ -0.76
PCDH15-221ENST00000463095 SPATA31D1Q6ZQQ2 1576 aa10.31□□□□□ -0.76
PCDH15-221ENST00000463095 AATKQ6ZMQ8 1374 aa10.31□□□□□ -0.76
PCDH15-221ENST00000463095 AP5Z1O43299 807 aa10.3□□□□□ -0.76
PCDH15-221ENST00000463095 GABPB1Q06547 395 aaPredicted RBP10.3□□□□□ -0.76
PCDH15-221ENST00000463095 RPAP2Q8IXW5 612 aaPredicted RBP10.3□□□□□ -0.76
PCDH15-221ENST00000463095 FMN2Q9NZ56 1722 aa10.3□□□□□ -0.76
PCDH15-221ENST00000463095 MORC2Q9Y6X9 1032 aaPredicted RBP10.3□□□□□ -0.76
PCDH15-221ENST00000463095 KDM4AO75164 1064 aa10.3□□□□□ -0.76
PCDH15-221ENST00000463095 CTNNA3Q9UI47 895 aa10.3□□□□□ -0.76
PCDH15-221ENST00000463095 RIMS2Q9UQ26 1411 aa10.3□□□□□ -0.76
PCDH15-221ENST00000463095 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
PCDH15-221ENST00000463095 PHF14O94880 888 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 CEP85Q6P2H3 762 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 TSPYL6Q8N831 410 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 PRDM10Q9NQV6 1147 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 OGFRQ9NZT2 677 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 TOPAZ1Q8N9V7 1692 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 REC8O95072 547 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 SLFN14P0C7P3 912 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 KCND1Q9NSA2 647 aa10.29□□□□□ -0.76
PCDH15-221ENST00000463095 ARHGEF10O15013 1369 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 ERC2O15083 957 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 TPM3P06753 285 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 NFE2L2Q16236 605 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 SYAP1Q96A49 352 aaPredicted RBP10.28□□□□□ -0.76
PCDH15-221ENST00000463095 CHAMP1Q96JM3 812 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
PCDH15-221ENST00000463095 MX1P20591 662 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
PCDH15-221ENST00000463095 DDX41Q9UJV9 622 aaKnown RBP10.28□□□□□ -0.76
PCDH15-221ENST00000463095 ADGRL3Q9HAR2 1447 aa10.28□□□□□ -0.76
PCDH15-221ENST00000463095 ALKQ9UM73 1620 aa10.27□□□□□ -0.76
PCDH15-221ENST00000463095 GADD45BO75293 160 aaPredicted RBP10.27□□□□□ -0.76
PCDH15-221ENST00000463095 NCBP1Q09161 790 aaKnown RBP10.27□□□□□ -0.76
PCDH15-221ENST00000463095 CCDC183Q5T5S1 534 aa10.27□□□□□ -0.76
PCDH15-221ENST00000463095 MBIPQ9NS73 344 aa10.27□□□□□ -0.76
PCDH15-221ENST00000463095 TULP2O00295 520 aa10.27□□□□□ -0.77
PCDH15-221ENST00000463095 C16orf71Q8IYS4 520 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms