RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 RAPGEF4Q8WZA2 1011 aa18.24■□□□□ 0.51
COL4A2-204ENST00000463084 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
COL4A2-204ENST00000463084 SGIP1Q9BQI5 828 aa18.23■□□□□ 0.51
COL4A2-204ENST00000463084 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
COL4A2-204ENST00000463084 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
COL4A2-204ENST00000463084 ZNF784Q8NCA9 323 aaPredicted RBP18.22■□□□□ 0.51
COL4A2-204ENST00000463084 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
COL4A2-204ENST00000463084 PAPPAQ13219 1627 aa18.21■□□□□ 0.51
COL4A2-204ENST00000463084 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
COL4A2-204ENST00000463084 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
COL4A2-204ENST00000463084 SLC16A10Q8TF71 515 aa18.21■□□□□ 0.51
COL4A2-204ENST00000463084 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
COL4A2-204ENST00000463084 USP47Q96K76 1375 aa18.2■□□□□ 0.5
COL4A2-204ENST00000463084 MEGF6O75095 1541 aa18.2■□□□□ 0.5
COL4A2-204ENST00000463084 PNPLA7Q6ZV29 1317 aa18.2■□□□□ 0.5
COL4A2-204ENST00000463084 NBPF6Q5VWK0 638 aa18.19■□□□□ 0.5
COL4A2-204ENST00000463084 NBPF4Q96M43 638 aa18.19■□□□□ 0.5
COL4A2-204ENST00000463084 CDCA8Q53HL2 280 aa18.18■□□□□ 0.5
COL4A2-204ENST00000463084 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
COL4A2-204ENST00000463084 FYB1O15117 783 aa18.17■□□□□ 0.5
COL4A2-204ENST00000463084 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
COL4A2-204ENST00000463084 HSP90AB2PQ58FF8 381 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 CGNL1Q0VF96 1302 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
COL4A2-204ENST00000463084 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
COL4A2-204ENST00000463084 NSD2O96028 1365 aa18.14■□□□□ 0.49
COL4A2-204ENST00000463084 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
COL4A2-204ENST00000463084 FLT4P35916 1363 aa18.13■□□□□ 0.49
COL4A2-204ENST00000463084 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
COL4A2-204ENST00000463084 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
COL4A2-204ENST00000463084 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
COL4A2-204ENST00000463084 INSRP06213 1382 aa18.11■□□□□ 0.49
COL4A2-204ENST00000463084 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
COL4A2-204ENST00000463084 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
COL4A2-204ENST00000463084 COL23A1Q86Y22 540 aaPredicted RBP18.1■□□□□ 0.49
COL4A2-204ENST00000463084 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
COL4A2-204ENST00000463084 AK7Q96M32 723 aa18.09■□□□□ 0.49
COL4A2-204ENST00000463084 PHF14O94880 888 aa18.08■□□□□ 0.48
COL4A2-204ENST00000463084 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
COL4A2-204ENST00000463084 GIGYF1O75420 1035 aaPredicted RBP18.07■□□□□ 0.48
COL4A2-204ENST00000463084 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
COL4A2-204ENST00000463084 SHANK3Q9BYB0 1731 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 C1QTNF8P60827 252 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 KIF20BQ96Q89 1820 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 LY75O60449 1722 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
COL4A2-204ENST00000463084 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
COL4A2-204ENST00000463084 CYP27B1O15528 508 aa18.05■□□□□ 0.48
COL4A2-204ENST00000463084 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
COL4A2-204ENST00000463084 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
COL4A2-204ENST00000463084 TNNT2P45379 298 aaPredicted RBP18.04■□□□□ 0.48
COL4A2-204ENST00000463084 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
COL4A2-204ENST00000463084 CHD4Q14839 1912 aa18.04■□□□□ 0.48
COL4A2-204ENST00000463084 YBX3P16989 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
COL4A2-204ENST00000463084 TMOD3Q9NYL9 352 aa18.02■□□□□ 0.48
COL4A2-204ENST00000463084 WWC3Q9ULE0 1092 aa18.02■□□□□ 0.48
COL4A2-204ENST00000463084 PIGBQ92521 554 aa18.01■□□□□ 0.47
COL4A2-204ENST00000463084 C5P01031 1676 aa18■□□□□ 0.47
COL4A2-204ENST00000463084 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
COL4A2-204ENST00000463084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.98■□□□□ 0.47
COL4A2-204ENST00000463084 EYA1Q99502 592 aa17.98■□□□□ 0.47
COL4A2-204ENST00000463084 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
COL4A2-204ENST00000463084 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
COL4A2-204ENST00000463084 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
COL4A2-204ENST00000463084 GNPATO15228 680 aa17.97■□□□□ 0.47
COL4A2-204ENST00000463084 SIK1P57059 783 aa17.97■□□□□ 0.47
COL4A2-204ENST00000463084 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
COL4A2-204ENST00000463084 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
COL4A2-204ENST00000463084 ZNF526Q8TF50 670 aaPredicted RBP17.96■□□□□ 0.47
COL4A2-204ENST00000463084 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
COL4A2-204ENST00000463084 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
COL4A2-204ENST00000463084 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
COL4A2-204ENST00000463084 ASAP1Q9ULH1 1129 aa17.95■□□□□ 0.46
COL4A2-204ENST00000463084 PHKG2P15735 406 aa17.94■□□□□ 0.46
COL4A2-204ENST00000463084 SSFA2P28290 1259 aa17.94■□□□□ 0.46
COL4A2-204ENST00000463084 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
COL4A2-204ENST00000463084 COL24A1Q17RW2 1714 aa17.94■□□□□ 0.46
COL4A2-204ENST00000463084 TOGARAM1Q9Y4F4 1720 aa17.94■□□□□ 0.46
COL4A2-204ENST00000463084 IGSF1Q8N6C5 1336 aa17.94■□□□□ 0.46
COL4A2-204ENST00000463084 UTRNP46939 3433 aa17.94■□□□□ 0.46
COL4A2-204ENST00000463084 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
COL4A2-204ENST00000463084 NKX1-1Q15270 411 aaPredicted RBP17.93■□□□□ 0.46
COL4A2-204ENST00000463084 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
COL4A2-204ENST00000463084 GPBP1L1Q9HC44 474 aaPredicted RBP17.93■□□□□ 0.46
COL4A2-204ENST00000463084 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
COL4A2-204ENST00000463084 ATP10DQ9P241 1426 aa17.92■□□□□ 0.46
COL4A2-204ENST00000463084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL4A2-204ENST00000463084 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
COL4A2-204ENST00000463084 ITPK1Q13572 414 aa17.91■□□□□ 0.46
COL4A2-204ENST00000463084 ITGB4P16144 1822 aa17.9■□□□□ 0.46
COL4A2-204ENST00000463084 NCAPD2Q15021 1401 aa17.89■□□□□ 0.46
COL4A2-204ENST00000463084 TAF1LQ8IZX4 1826 aa17.89■□□□□ 0.45
COL4A2-204ENST00000463084 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL4A2-204ENST00000463084 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms