RNA–Protein interactions for RNA: ENST00000463070.1

APP-212, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-212ENST00000463070 GOLGB1Q14789 3259 aaKnown RBP12.01□□□□□ -0.49
APP-212ENST00000463070 SHANK3Q9BYB0 1731 aa12□□□□□ -0.49
APP-212ENST00000463070 RGPD5Q99666 1765 aa12□□□□□ -0.49
APP-212ENST00000463070 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
APP-212ENST00000463070 CEP350Q5VT06 3117 aa12□□□□□ -0.49
APP-212ENST00000463070 AMPHP49418 695 aa11.99□□□□□ -0.49
APP-212ENST00000463070 MSL1Q68DK7 614 aa11.99□□□□□ -0.49
APP-212ENST00000463070 QSER1Q2KHR3 1735 aa11.99□□□□□ -0.49
APP-212ENST00000463070 NSD2O96028 1365 aa11.98□□□□□ -0.49
APP-212ENST00000463070 COG3Q96JB2 828 aa11.98□□□□□ -0.49
APP-212ENST00000463070 PUS7Q96PZ0 661 aaKnown RBP11.98□□□□□ -0.49
APP-212ENST00000463070 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
APP-212ENST00000463070 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
APP-212ENST00000463070 ADCY9O60503 1353 aa11.97□□□□□ -0.49
APP-212ENST00000463070 HOXC9P31274 260 aa11.97□□□□□ -0.49
APP-212ENST00000463070 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
APP-212ENST00000463070 RAPGEF4Q8WZA2 1011 aa11.97□□□□□ -0.49
APP-212ENST00000463070 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
APP-212ENST00000463070 APLP1P51693 650 aa11.96□□□□□ -0.49
APP-212ENST00000463070 CARD11Q9BXL7 1154 aa11.96□□□□□ -0.49
APP-212ENST00000463070 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
APP-212ENST00000463070 MON2Q7Z3U7 1717 aa11.95□□□□□ -0.5
APP-212ENST00000463070 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
APP-212ENST00000463070 USP54Q70EL1 1684 aa11.95□□□□□ -0.5
APP-212ENST00000463070 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
APP-212ENST00000463070 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
APP-212ENST00000463070 AK7Q96M32 723 aa11.95□□□□□ -0.5
APP-212ENST00000463070 NSD3Q9BZ95 1437 aa11.94□□□□□ -0.5
APP-212ENST00000463070 A0A1W2PP64 1363 aa11.94□□□□□ -0.5
APP-212ENST00000463070 TATP17735 454 aaPredicted RBP11.94□□□□□ -0.5
APP-212ENST00000463070 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
APP-212ENST00000463070 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
APP-212ENST00000463070 IGSF1Q8N6C5 1336 aa11.93□□□□□ -0.5
APP-212ENST00000463070 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
APP-212ENST00000463070 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
APP-212ENST00000463070 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
APP-212ENST00000463070 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
APP-212ENST00000463070 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
APP-212ENST00000463070 LTN1O94822 1766 aa11.92□□□□□ -0.5
APP-212ENST00000463070 MEGF6O75095 1541 aa11.91□□□□□ -0.5
APP-212ENST00000463070 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
APP-212ENST00000463070 KIF3CO14782 793 aa11.91□□□□□ -0.5
APP-212ENST00000463070 SSFA2P28290 1259 aa11.91□□□□□ -0.5
APP-212ENST00000463070 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
APP-212ENST00000463070 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
APP-212ENST00000463070 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
APP-212ENST00000463070 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
APP-212ENST00000463070 LY75O60449 1722 aa11.9□□□□□ -0.5
APP-212ENST00000463070 TOMM70O94826 608 aa11.9□□□□□ -0.5
APP-212ENST00000463070 PHF14O94880 888 aa11.89□□□□□ -0.51
APP-212ENST00000463070 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
APP-212ENST00000463070 USHBP1Q8N6Y0 703 aa11.88□□□□□ -0.51
APP-212ENST00000463070 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
APP-212ENST00000463070 TGFB2P61812 414 aa11.87□□□□□ -0.51
APP-212ENST00000463070 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
APP-212ENST00000463070 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
APP-212ENST00000463070 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
APP-212ENST00000463070 FBLN1P23142 703 aa11.86□□□□□ -0.51
APP-212ENST00000463070 SIK1P57059 783 aa11.86□□□□□ -0.51
APP-212ENST00000463070 C16orf71Q8IYS4 520 aaPredicted RBP11.86□□□□□ -0.51
APP-212ENST00000463070 KIF24Q5T7B8 1368 aa11.86□□□□□ -0.51
APP-212ENST00000463070 INSRP06213 1382 aa11.85□□□□□ -0.51
APP-212ENST00000463070 CYP27B1O15528 508 aa11.85□□□□□ -0.51
APP-212ENST00000463070 DNAJC5GQ8N7S2 189 aa11.85□□□□□ -0.51
APP-212ENST00000463070 PIGBQ92521 554 aa11.85□□□□□ -0.51
APP-212ENST00000463070 SPG7Q9UQ90 795 aa11.85□□□□□ -0.51
APP-212ENST00000463070 FLT4P35916 1363 aa11.84□□□□□ -0.51
APP-212ENST00000463070 FYB1O15117 783 aa11.84□□□□□ -0.51
APP-212ENST00000463070 GNPATO15228 680 aa11.84□□□□□ -0.51
APP-212ENST00000463070 MMP10P09238 476 aa11.84□□□□□ -0.51
APP-212ENST00000463070 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
APP-212ENST00000463070 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
APP-212ENST00000463070 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
APP-212ENST00000463070 TMOD3Q9NYL9 352 aa11.84□□□□□ -0.51
APP-212ENST00000463070 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
APP-212ENST00000463070 C5P01031 1676 aa11.84□□□□□ -0.51
APP-212ENST00000463070 ATP6V1AP38606 617 aa11.83□□□□□ -0.52
APP-212ENST00000463070 FSTL1Q12841 308 aa11.83□□□□□ -0.52
APP-212ENST00000463070 HSP90AB2PQ58FF8 381 aa11.83□□□□□ -0.52
APP-212ENST00000463070 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
APP-212ENST00000463070 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
APP-212ENST00000463070 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
APP-212ENST00000463070 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
APP-212ENST00000463070 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
APP-212ENST00000463070 TMF1P82094 1093 aa11.82□□□□□ -0.52
APP-212ENST00000463070 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
APP-212ENST00000463070 TESK2Q96S53 571 aa11.82□□□□□ -0.52
APP-212ENST00000463070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.522e-10■■□□□ 12.8
APP-212ENST00000463070 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
APP-212ENST00000463070 C4BP0C0L5 1744 aa11.82□□□□□ -0.52
APP-212ENST00000463070 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
APP-212ENST00000463070 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
APP-212ENST00000463070 FCHSD2O94868 740 aa11.81□□□□□ -0.52
APP-212ENST00000463070 ADRA2BP18089 450 aa11.81□□□□□ -0.52
APP-212ENST00000463070 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
APP-212ENST00000463070 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
APP-212ENST00000463070 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
APP-212ENST00000463070 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
APP-212ENST00000463070 SMIM5Q71RC9 77 aa11.8□□□□□ -0.52
APP-212ENST00000463070 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms