RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 DEFB132Q7Z7B7 95 aa22.48■■□□□ 1.19
HLA-DPA1-245ENST00000463066 HMOX1P09601 288 aa22.46■■□□□ 1.19
HLA-DPA1-245ENST00000463066 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.19
HLA-DPA1-245ENST00000463066 ACSBG1Q96GR2 724 aa22.45■■□□□ 1.18
HLA-DPA1-245ENST00000463066 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
HLA-DPA1-245ENST00000463066 CYP27B1O15528 508 aa22.44■■□□□ 1.18
HLA-DPA1-245ENST00000463066 RALBP1Q15311 655 aa22.44■■□□□ 1.18
HLA-DPA1-245ENST00000463066 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
HLA-DPA1-245ENST00000463066 EP400Q96L91 3159 aa22.44■■□□□ 1.18
HLA-DPA1-245ENST00000463066 KCNQ2O43526 872 aa22.43■■□□□ 1.18
HLA-DPA1-245ENST00000463066 CFAP53Q96M91 514 aa22.43■■□□□ 1.18
HLA-DPA1-245ENST00000463066 CCDC125Q86Z20 511 aa22.42■■□□□ 1.18
HLA-DPA1-245ENST00000463066 BCL9O00512 1426 aa22.41■■□□□ 1.18
HLA-DPA1-245ENST00000463066 KDRP35968 1356 aa22.41■■□□□ 1.18
HLA-DPA1-245ENST00000463066 SF3B2Q13435 895 aaKnown RBP22.41■■□□□ 1.18
HLA-DPA1-245ENST00000463066 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
HLA-DPA1-245ENST00000463066 TNS1Q9HBL0 1735 aaKnown RBP22.4■■□□□ 1.18
HLA-DPA1-245ENST00000463066 PCDH11XQ9BZA7 1347 aa22.39■■□□□ 1.18
HLA-DPA1-245ENST00000463066 PCDH11YQ9BZA8 1340 aa22.39■■□□□ 1.18
HLA-DPA1-245ENST00000463066 APBA3O96018 575 aa22.39■■□□□ 1.17
HLA-DPA1-245ENST00000463066 EN1Q05925 392 aaPredicted RBP22.39■■□□□ 1.17
HLA-DPA1-245ENST00000463066 SPG7Q9UQ90 795 aa22.39■■□□□ 1.17
HLA-DPA1-245ENST00000463066 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
HLA-DPA1-245ENST00000463066 PKD1L3Q7Z443 1732 aa22.38■■□□□ 1.17
HLA-DPA1-245ENST00000463066 BCL11BQ9C0K0 894 aaPredicted RBP22.37■■□□□ 1.17
HLA-DPA1-245ENST00000463066 BAG6P46379 1132 aa22.36■■□□□ 1.17
HLA-DPA1-245ENST00000463066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.36■■□□□ 1.17
HLA-DPA1-245ENST00000463066 PHKG2P15735 406 aa22.35■■□□□ 1.17
HLA-DPA1-245ENST00000463066 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
HLA-DPA1-245ENST00000463066 PLEKHO1Q53GL0 409 aaPredicted RBP22.35■■□□□ 1.17
HLA-DPA1-245ENST00000463066 ZNF530Q6P9A1 599 aaPredicted RBP22.35■■□□□ 1.17
HLA-DPA1-245ENST00000463066 SBF2Q86WG5 1849 aa22.35■■□□□ 1.17
HLA-DPA1-245ENST00000463066 U2AF1L5P0DN76 240 aaPredicted RBP22.34■■□□□ 1.17
HLA-DPA1-245ENST00000463066 U2AF1Q01081 240 aaKnown RBP eCLIP22.34■■□□□ 1.17
HLA-DPA1-245ENST00000463066 EZH2Q15910 746 aaKnown RBP22.34■■□□□ 1.17
HLA-DPA1-245ENST00000463066 SYTL4Q96C24 671 aaPredicted RBP22.33■■□□□ 1.17
HLA-DPA1-245ENST00000463066 NUDCQ9Y266 331 aa22.33■■□□□ 1.17
HLA-DPA1-245ENST00000463066 IFNL2Q8IZJ0 200 aa22.32■■□□□ 1.16
HLA-DPA1-245ENST00000463066 CAMKK2Q96RR4 588 aa22.32■■□□□ 1.16
HLA-DPA1-245ENST00000463066 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
HLA-DPA1-245ENST00000463066 DOT1LQ8TEK3 1739 aa22.31■■□□□ 1.16
HLA-DPA1-245ENST00000463066 NHSQ6T4R5 1651 aa22.31■■□□□ 1.16
HLA-DPA1-245ENST00000463066 PRKAR2BP31323 418 aa22.31■■□□□ 1.16
HLA-DPA1-245ENST00000463066 NKX1-1Q15270 411 aaPredicted RBP22.31■■□□□ 1.16
HLA-DPA1-245ENST00000463066 AMOTQ4VCS5 1084 aa22.31■■□□□ 1.16
HLA-DPA1-245ENST00000463066 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
HLA-DPA1-245ENST00000463066 PHACTR3Q96KR7 559 aa22.3■■□□□ 1.16
HLA-DPA1-245ENST00000463066 TOGARAM1Q9Y4F4 1720 aa22.28■■□□□ 1.16
HLA-DPA1-245ENST00000463066 PLEKHG2Q9H7P9 1386 aa22.28■■□□□ 1.16
HLA-DPA1-245ENST00000463066 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
HLA-DPA1-245ENST00000463066 KDM6AO15550 1401 aaPredicted RBP22.27■■□□□ 1.16
HLA-DPA1-245ENST00000463066 MPRIPQ6WCQ1 1025 aa22.26■■□□□ 1.15
HLA-DPA1-245ENST00000463066 PROM2Q8N271 834 aa22.26■■□□□ 1.15
HLA-DPA1-245ENST00000463066 C1orf141Q5JVX7 400 aa22.25■■□□□ 1.15
HLA-DPA1-245ENST00000463066 PLSCR1O15162 318 aa22.24■■□□□ 1.15
HLA-DPA1-245ENST00000463066 PIGBQ92521 554 aa22.24■■□□□ 1.15
HLA-DPA1-245ENST00000463066 BTAF1O14981 1849 aa22.24■■□□□ 1.15
HLA-DPA1-245ENST00000463066 KAT6BQ8WYB5 2073 aa22.24■■□□□ 1.15
HLA-DPA1-245ENST00000463066 ANP32CO43423 234 aa22.23■■□□□ 1.15
HLA-DPA1-245ENST00000463066 FCHSD2O94868 740 aa22.23■■□□□ 1.15
HLA-DPA1-245ENST00000463066 TXNRD1Q16881 649 aa22.22■■□□□ 1.15
HLA-DPA1-245ENST00000463066 AKAP4Q5JQC9 854 aa22.22■■□□□ 1.15
HLA-DPA1-245ENST00000463066 DCAF5Q96JK2 942 aa22.22■■□□□ 1.15
HLA-DPA1-245ENST00000463066 LGR6Q9HBX8 967 aa22.22■■□□□ 1.15
HLA-DPA1-245ENST00000463066 KCNQ4P56696 695 aa22.21■■□□□ 1.15
HLA-DPA1-245ENST00000463066 HSP90AB1P08238 724 aaKnown RBP22.2■■□□□ 1.14
HLA-DPA1-245ENST00000463066 GAS2L2Q8NHY3 880 aa22.19■■□□□ 1.14
HLA-DPA1-245ENST00000463066 PLEKHF1Q96S99 279 aa22.19■■□□□ 1.14
HLA-DPA1-245ENST00000463066 TMOD3Q9NYL9 352 aa22.19■■□□□ 1.14
HLA-DPA1-245ENST00000463066 RNMTO43148 476 aaKnown RBP22.18■■□□□ 1.14
HLA-DPA1-245ENST00000463066 RREB1Q92766 1687 aa22.17■■□□□ 1.14
HLA-DPA1-245ENST00000463066 ERVV-2B6SEH9 535 aa22.17■■□□□ 1.14
HLA-DPA1-245ENST00000463066 LRRC4BQ9NT99 713 aa22.17■■□□□ 1.14
HLA-DPA1-245ENST00000463066 ASAP1Q9ULH1 1129 aa22.17■■□□□ 1.14
HLA-DPA1-245ENST00000463066 MAP3K5Q99683 1374 aa22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 ITGB4P16144 1822 aa22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 PSDA5PKW4 1024 aaPredicted RBP22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 CABP4P57796 275 aa22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 CCDC146Q8IYE0 955 aa22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 ANO8Q9HCE9 1232 aaPredicted RBP22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 NUP188Q5SRE5 1749 aa22.16■■□□□ 1.14
HLA-DPA1-245ENST00000463066 PALLDQ8WX93 1383 aa22.15■■□□□ 1.14
HLA-DPA1-245ENST00000463066 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
HLA-DPA1-245ENST00000463066 NFATC2IPQ8NCF5 419 aa22.15■■□□□ 1.14
HLA-DPA1-245ENST00000463066 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
HLA-DPA1-245ENST00000463066 ATG3Q9NT62 314 aa22.15■■□□□ 1.14
HLA-DPA1-245ENST00000463066 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
HLA-DPA1-245ENST00000463066 RGPD3A6NKT7 1758 aaPredicted RBP22.14■■□□□ 1.13
HLA-DPA1-245ENST00000463066 RGPD4Q7Z3J3 1758 aa22.14■■□□□ 1.13
HLA-DPA1-245ENST00000463066 R3HDM1Q15032 1099 aaKnown RBP22.13■■□□□ 1.13
HLA-DPA1-245ENST00000463066 DCTN1Q14203 1278 aa22.12■■□□□ 1.13
HLA-DPA1-245ENST00000463066 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
HLA-DPA1-245ENST00000463066 MCM10Q7L590 875 aa22.11■■□□□ 1.13
HLA-DPA1-245ENST00000463066 SLC52A2Q9HAB3 445 aa22.11■■□□□ 1.13
HLA-DPA1-245ENST00000463066 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
HLA-DPA1-245ENST00000463066 MAPK8IP3Q9UPT6 1336 aa22.1■■□□□ 1.13
HLA-DPA1-245ENST00000463066 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
HLA-DPA1-245ENST00000463066 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
HLA-DPA1-245ENST00000463066 SCN11AQ9UI33 1791 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms