RNA–Protein interactions for RNA: ENST00000462998.1

PTPN23-203, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 3

Gene PTPN23, Length 260 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-203ENST00000462998 RGPD4Q7Z3J3 1758 aa15.08■□□□□ 0
PTPN23-203ENST00000462998 KCNQ2O43526 872 aa15.07■□□□□ 0
PTPN23-203ENST00000462998 R3HDM1Q15032 1099 aaKnown RBP15.07■□□□□ 0
PTPN23-203ENST00000462998 ZCRB1Q8TBF4 217 aaKnown RBP15.07■□□□□ 0
PTPN23-203ENST00000462998 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
PTPN23-203ENST00000462998 PLSCR1O15162 318 aa15.06■□□□□ 0
PTPN23-203ENST00000462998 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
PTPN23-203ENST00000462998 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
PTPN23-203ENST00000462998 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
PTPN23-203ENST00000462998 NBPF14Q5TI25 921 aa15.04■□□□□ -0
PTPN23-203ENST00000462998 BTAF1O14981 1849 aa15.03■□□□□ -0
PTPN23-203ENST00000462998 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
PTPN23-203ENST00000462998 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
PTPN23-203ENST00000462998 EYA1Q99502 592 aa15.03■□□□□ -0
PTPN23-203ENST00000462998 NCAPD2Q15021 1401 aa15.02■□□□□ -0
PTPN23-203ENST00000462998 SYTL4Q96C24 671 aaPredicted RBP15.02■□□□□ -0
PTPN23-203ENST00000462998 PCDH11XQ9BZA7 1347 aa15.01□□□□□ -0.01
PTPN23-203ENST00000462998 PCDH11YQ9BZA8 1340 aa15.01□□□□□ -0.01
PTPN23-203ENST00000462998 CC2D1BQ5T0F9 858 aaKnown RBP15.01□□□□□ -0.01
PTPN23-203ENST00000462998 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
PTPN23-203ENST00000462998 PER1O15534 1290 aaPredicted RBP15□□□□□ -0.01
PTPN23-203ENST00000462998 CNGB1Q14028 1251 aaPredicted RBP15□□□□□ -0.01
PTPN23-203ENST00000462998 TXNRD1Q16881 649 aa15□□□□□ -0.01
PTPN23-203ENST00000462998 PROM2Q8N271 834 aa15□□□□□ -0.01
PTPN23-203ENST00000462998 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
PTPN23-203ENST00000462998 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
PTPN23-203ENST00000462998 LRP5O75197 1615 aa14.99□□□□□ -0.01
PTPN23-203ENST00000462998 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
PTPN23-203ENST00000462998 CYP27B1O15528 508 aa14.97□□□□□ -0.01
PTPN23-203ENST00000462998 SPG7Q9UQ90 795 aa14.97□□□□□ -0.01
PTPN23-203ENST00000462998 STK32BQ9NY57 414 aa14.95□□□□□ -0.02
PTPN23-203ENST00000462998 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
PTPN23-203ENST00000462998 TOGARAM1Q9Y4F4 1720 aa14.95□□□□□ -0.02
PTPN23-203ENST00000462998 MTHFSP49914 203 aa14.94□□□□□ -0.02
PTPN23-203ENST00000462998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTPN23-203ENST00000462998 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
PTPN23-203ENST00000462998 IL13P35225 146 aa14.92□□□□□ -0.02
PTPN23-203ENST00000462998 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
PTPN23-203ENST00000462998 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
PTPN23-203ENST00000462998 LRRC4BQ9NT99 713 aa14.92□□□□□ -0.02
PTPN23-203ENST00000462998 PLEKHG2Q9H7P9 1386 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 PHKG2P15735 406 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 SLC15A2Q16348 729 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 SLC27A3Q5K4L6 730 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 SULT6B1Q6IMI4 303 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 LY75O60449 1722 aa14.91□□□□□ -0.02
PTPN23-203ENST00000462998 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
PTPN23-203ENST00000462998 ITGB4P16144 1822 aa14.9□□□□□ -0.02
PTPN23-203ENST00000462998 KCNQ4P56696 695 aa14.9□□□□□ -0.02
PTPN23-203ENST00000462998 NKX1-1Q15270 411 aaPredicted RBP14.9□□□□□ -0.02
PTPN23-203ENST00000462998 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
PTPN23-203ENST00000462998 ZNF827Q17R98 1081 aa14.89□□□□□ -0.03
PTPN23-203ENST00000462998 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
PTPN23-203ENST00000462998 PDGFDQ9GZP0 370 aaPredicted RBP14.89□□□□□ -0.03
PTPN23-203ENST00000462998 CCNL1Q9UK58 526 aaPredicted RBP14.89□□□□□ -0.03
PTPN23-203ENST00000462998 KDRP35968 1356 aa14.88□□□□□ -0.03
PTPN23-203ENST00000462998 PALLDQ8WX93 1383 aa14.88□□□□□ -0.03
PTPN23-203ENST00000462998 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
PTPN23-203ENST00000462998 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
PTPN23-203ENST00000462998 SPON1Q9HCB6 807 aa14.88□□□□□ -0.03
PTPN23-203ENST00000462998 ZBTB7AO95365 584 aa14.87□□□□□ -0.03
PTPN23-203ENST00000462998 PIGBQ92521 554 aa14.87□□□□□ -0.03
PTPN23-203ENST00000462998 TMOD3Q9NYL9 352 aa14.87□□□□□ -0.03
PTPN23-203ENST00000462998 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
PTPN23-203ENST00000462998 HMOX1P09601 288 aa14.86□□□□□ -0.03
PTPN23-203ENST00000462998 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
PTPN23-203ENST00000462998 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
PTPN23-203ENST00000462998 SMARCC1Q92922 1105 aaPredicted RBP14.85□□□□□ -0.03
PTPN23-203ENST00000462998 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
PTPN23-203ENST00000462998 PPP1R1BQ9UD71 204 aaPredicted RBP14.85□□□□□ -0.03
PTPN23-203ENST00000462998 C5P01031 1676 aa14.84□□□□□ -0.03
PTPN23-203ENST00000462998 U2SURPO15042 1029 aaKnown RBP14.84□□□□□ -0.03
PTPN23-203ENST00000462998 DCAF5Q96JK2 942 aa14.84□□□□□ -0.03
PTPN23-203ENST00000462998 CFAP53Q96M91 514 aa14.84□□□□□ -0.03
PTPN23-203ENST00000462998 TFCP2L1Q9NZI6 479 aa14.84□□□□□ -0.03
PTPN23-203ENST00000462998 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
PTPN23-203ENST00000462998 TUBGCP6Q96RT7 1819 aa14.84□□□□□ -0.03
PTPN23-203ENST00000462998 KDM6AO15550 1401 aaPredicted RBP14.83□□□□□ -0.03
PTPN23-203ENST00000462998 QSER1Q2KHR3 1735 aa14.83□□□□□ -0.04
PTPN23-203ENST00000462998 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
PTPN23-203ENST00000462998 PPP2R1AP30153 589 aa14.82□□□□□ -0.04
PTPN23-203ENST00000462998 ASAP1Q9ULH1 1129 aa14.82□□□□□ -0.04
PTPN23-203ENST00000462998 TAF1LQ8IZX4 1826 aa14.81□□□□□ -0.04
PTPN23-203ENST00000462998 CABP4P57796 275 aa14.81□□□□□ -0.04
PTPN23-203ENST00000462998 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
PTPN23-203ENST00000462998 PNPLA7Q6ZV29 1317 aa14.81□□□□□ -0.04
PTPN23-203ENST00000462998 LOC102724428A0A0B4J2F2 783 aa14.8□□□□□ -0.04
PTPN23-203ENST00000462998 SIK1P57059 783 aa14.8□□□□□ -0.04
PTPN23-203ENST00000462998 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
PTPN23-203ENST00000462998 MSH5O43196 834 aa14.79□□□□□ -0.04
PTPN23-203ENST00000462998 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
PTPN23-203ENST00000462998 HMGB2P26583 209 aaKnown RBP14.79□□□□□ -0.04
PTPN23-203ENST00000462998 ATG3Q9NT62 314 aa14.79□□□□□ -0.04
PTPN23-203ENST00000462998 SCN11AQ9UI33 1791 aa14.78□□□□□ -0.04
PTPN23-203ENST00000462998 PTGER2P43116 358 aa14.78□□□□□ -0.04
PTPN23-203ENST00000462998 AK7Q96M32 723 aa14.78□□□□□ -0.04
PTPN23-203ENST00000462998 NUDCQ9Y266 331 aa14.78□□□□□ -0.04
PTPN23-203ENST00000462998 ATP6V1AP38606 617 aa14.77□□□□□ -0.05
PTPN23-203ENST00000462998 MTHFSDQ2M296 383 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms