RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 ROBO1Q9Y6N7 1651 aa20.06■□□□□ 0.8
PCCB-204ENST00000462637 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
PCCB-204ENST00000462637 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
PCCB-204ENST00000462637 LRRC59Q96AG4 307 aaKnown RBP20.05■□□□□ 0.8
PCCB-204ENST00000462637 COG6Q9Y2V7 657 aa20.05■□□□□ 0.8
PCCB-204ENST00000462637 FTSJ3Q8IY81 847 aaKnown RBP20.05■□□□□ 0.8
PCCB-204ENST00000462637 VAMP4O75379 141 aa20.04■□□□□ 0.8
PCCB-204ENST00000462637 DZIP1LQ8IYY4 767 aaKnown RBP20.04■□□□□ 0.8
PCCB-204ENST00000462637 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
PCCB-204ENST00000462637 KDM2BQ8NHM5 1336 aa20.04■□□□□ 0.8
PCCB-204ENST00000462637 ALS2Q96Q42 1657 aa20.04■□□□□ 0.8
PCCB-204ENST00000462637 CHL1O00533 1208 aa20.03■□□□□ 0.8
PCCB-204ENST00000462637 MCM10Q7L590 875 aa20.03■□□□□ 0.8
PCCB-204ENST00000462637 ZBTB7CA1YPR0 619 aa20.02■□□□□ 0.8
PCCB-204ENST00000462637 ATF7IPQ6VMQ6 1270 aa20.02■□□□□ 0.8
PCCB-204ENST00000462637 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.8
PCCB-204ENST00000462637 CRB1P82279 1406 aa20.02■□□□□ 0.8
PCCB-204ENST00000462637 TWISTNBQ3B726 338 aaPredicted RBP20.02■□□□□ 0.79
PCCB-204ENST00000462637 RLBP1P12271 317 aa20.01■□□□□ 0.79
PCCB-204ENST00000462637 ZC3H6P61129 1189 aaKnown RBP20.01■□□□□ 0.79
PCCB-204ENST00000462637 MVPQ14764 893 aaKnown RBP20.01■□□□□ 0.79
PCCB-204ENST00000462637 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
PCCB-204ENST00000462637 KIAA0232Q92628 1395 aa20.01■□□□□ 0.79
PCCB-204ENST00000462637 GNAT3A8MTJ3 354 aa20■□□□□ 0.79
PCCB-204ENST00000462637 TCERG1O14776 1098 aaKnown RBP20■□□□□ 0.79
PCCB-204ENST00000462637 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
PCCB-204ENST00000462637 TRIM27P14373 513 aa19.99■□□□□ 0.79
PCCB-204ENST00000462637 AHDC1Q5TGY3 1603 aaPredicted RBP19.99■□□□□ 0.79
PCCB-204ENST00000462637 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
PCCB-204ENST00000462637 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
PCCB-204ENST00000462637 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
PCCB-204ENST00000462637 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
PCCB-204ENST00000462637 TSPYL6Q8N831 410 aa19.98■□□□□ 0.79
PCCB-204ENST00000462637 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
PCCB-204ENST00000462637 RBM19Q9Y4C8 960 aaKnown RBP19.98■□□□□ 0.79
PCCB-204ENST00000462637 NCAPD2Q15021 1401 aa19.97■□□□□ 0.79
PCCB-204ENST00000462637 MRPL50Q8N5N7 158 aaKnown RBP19.97■□□□□ 0.79
PCCB-204ENST00000462637 TNNQ9UQP3 1299 aa19.97■□□□□ 0.79
PCCB-204ENST00000462637 USHBP1Q8N6Y0 703 aa19.96■□□□□ 0.79
PCCB-204ENST00000462637 ANKRD24Q8TF21 1146 aa19.96■□□□□ 0.79
PCCB-204ENST00000462637 DDX19BQ9UMR2 479 aa19.96■□□□□ 0.79
PCCB-204ENST00000462637 BABAM1Q9NWV8 329 aa19.96■□□□□ 0.79
PCCB-204ENST00000462637 ELL2O00472 640 aaPredicted RBP19.94■□□□□ 0.78
PCCB-204ENST00000462637 TSPYL4Q9UJ04 414 aa19.94■□□□□ 0.78
PCCB-204ENST00000462637 AXIN2Q9Y2T1 843 aa19.94■□□□□ 0.78
PCCB-204ENST00000462637 ABCC6O95255 1503 aa19.94■□□□□ 0.78
PCCB-204ENST00000462637 LRRC37A3O60309 1634 aa19.94■□□□□ 0.78
PCCB-204ENST00000462637 AMOTQ4VCS5 1084 aa19.93■□□□□ 0.78
PCCB-204ENST00000462637 PLEKHO1Q53GL0 409 aaPredicted RBP19.93■□□□□ 0.78
PCCB-204ENST00000462637 CHMP4BQ9H444 224 aaKnown RBP19.93■□□□□ 0.78
PCCB-204ENST00000462637 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
PCCB-204ENST00000462637 ITPRIPQ8IWB1 547 aa19.92■□□□□ 0.78
PCCB-204ENST00000462637 API5Q9BZZ5 524 aaKnown RBP19.91■□□□□ 0.78
PCCB-204ENST00000462637 CAMTA1Q9Y6Y1 1673 aa19.91■□□□□ 0.78
PCCB-204ENST00000462637 ERBB3P21860 1342 aa19.91■□□□□ 0.78
PCCB-204ENST00000462637 CPDO75976 1380 aa19.9■□□□□ 0.78
PCCB-204ENST00000462637 PHLPP1O60346 1717 aa19.9■□□□□ 0.78
PCCB-204ENST00000462637 SOS1Q07889 1333 aaPredicted RBP19.9■□□□□ 0.78
PCCB-204ENST00000462637 TMEM57Q8N5G2 664 aa19.9■□□□□ 0.78
PCCB-204ENST00000462637 FBXO41Q8TF61 875 aa19.9■□□□□ 0.78
PCCB-204ENST00000462637 RWDD1Q9H446 243 aaPredicted RBP19.9■□□□□ 0.78
PCCB-204ENST00000462637 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
PCCB-204ENST00000462637 IL17REQ8NFR9 667 aa19.89■□□□□ 0.77
PCCB-204ENST00000462637 COL16A1Q07092 1604 aaPredicted RBP19.89■□□□□ 0.77
PCCB-204ENST00000462637 IGHDP01880 384 aa19.88■□□□□ 0.77
PCCB-204ENST00000462637 AKAP4Q5JQC9 854 aa19.88■□□□□ 0.77
PCCB-204ENST00000462637 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
PCCB-204ENST00000462637 CEMIPQ8WUJ3 1361 aa19.88■□□□□ 0.77
PCCB-204ENST00000462637 PLEKHG2Q9H7P9 1386 aa19.87■□□□□ 0.77
PCCB-204ENST00000462637 ZNF530Q6P9A1 599 aaPredicted RBP19.87■□□□□ 0.77
PCCB-204ENST00000462637 PCDHB15Q9Y5E8 787 aa19.87■□□□□ 0.77
PCCB-204ENST00000462637 ABCC4O15439 1325 aa19.86■□□□□ 0.77
PCCB-204ENST00000462637 CRYBG1Q9Y4K1 1723 aa19.86■□□□□ 0.77
PCCB-204ENST00000462637 HSPA1LP34931 641 aa19.86■□□□□ 0.77
PCCB-204ENST00000462637 MIS18AQ9NYP9 233 aa19.86■□□□□ 0.77
PCCB-204ENST00000462637 LMO7Q8WWI1 1683 aa19.85■□□□□ 0.77
PCCB-204ENST00000462637 OVOS2A0A0G2JMS6 1433 aa19.85■□□□□ 0.77
PCCB-204ENST00000462637 KRT24Q2M2I5 525 aa19.85■□□□□ 0.77
PCCB-204ENST00000462637 C1orf141Q5JVX7 400 aa19.85■□□□□ 0.77
PCCB-204ENST00000462637 ZBTB40Q9NUA8 1239 aa19.85■□□□□ 0.77
PCCB-204ENST00000462637 PTPRCP08575 1304 aa19.84■□□□□ 0.77
PCCB-204ENST00000462637 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.77
PCCB-204ENST00000462637 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.77
PCCB-204ENST00000462637 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.77
PCCB-204ENST00000462637 RGPD2P0DJD1 1756 aa19.82■□□□□ 0.76
PCCB-204ENST00000462637 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
PCCB-204ENST00000462637 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
PCCB-204ENST00000462637 NLRP2Q9NX02 1062 aa19.82■□□□□ 0.76
PCCB-204ENST00000462637 JCADQ9P266 1359 aa19.82■□□□□ 0.76
PCCB-204ENST00000462637 COL18A1P39060 1754 aa19.82■□□□□ 0.76
PCCB-204ENST00000462637 CHMP4AQ9BY43 222 aa19.82■□□□□ 0.76
PCCB-204ENST00000462637 COL22A1Q8NFW1 1626 aaPredicted RBP19.81■□□□□ 0.76
PCCB-204ENST00000462637 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
PCCB-204ENST00000462637 ADAMTS2O95450 1211 aa19.81■□□□□ 0.76
PCCB-204ENST00000462637 CSB-PGBD3P0DP91 1061 aa19.81■□□□□ 0.76
PCCB-204ENST00000462637 TEFQ10587 303 aa19.81■□□□□ 0.76
PCCB-204ENST00000462637 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
PCCB-204ENST00000462637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.8■□□□□ 0.76
PCCB-204ENST00000462637 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
PCCB-204ENST00000462637 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms