RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 CARD11Q9BXL7 1154 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 SLC12A5Q9H2X9 1139 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 NLRP2Q9NX02 1062 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
CDC42BPA-210ENST00000462553 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
CDC42BPA-210ENST00000462553 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
CDC42BPA-210ENST00000462553 MEGF6O75095 1541 aa11.23□□□□□ -0.61
CDC42BPA-210ENST00000462553 NSD2O96028 1365 aa11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 MTFR1LQ9H019 292 aa11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 LRRC4BQ9NT99 713 aa11.22□□□□□ -0.61
CDC42BPA-210ENST00000462553 TOGARAM1Q9Y4F4 1720 aa11.21□□□□□ -0.61
CDC42BPA-210ENST00000462553 C5P01031 1676 aa11.21□□□□□ -0.61
CDC42BPA-210ENST00000462553 TESK2Q96S53 571 aa11.21□□□□□ -0.61
CDC42BPA-210ENST00000462553 ITGB4P16144 1822 aa11.21□□□□□ -0.62
CDC42BPA-210ENST00000462553 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.62
CDC42BPA-210ENST00000462553 IP6K1Q92551 441 aa11.2□□□□□ -0.62
CDC42BPA-210ENST00000462553 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-210ENST00000462553 SYT17Q9BSW7 474 aa11.2□□□□□ -0.62
CDC42BPA-210ENST00000462553 PKD1L3Q7Z443 1732 aa11.19□□□□□ -0.62
CDC42BPA-210ENST00000462553 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
CDC42BPA-210ENST00000462553 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
CDC42BPA-210ENST00000462553 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
CDC42BPA-210ENST00000462553 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
CDC42BPA-210ENST00000462553 HOXC9P31274 260 aa11.18□□□□□ -0.62
CDC42BPA-210ENST00000462553 POLA2Q14181 598 aa11.18□□□□□ -0.62
CDC42BPA-210ENST00000462553 ANKRD36BQ8N2N9 1353 aa11.17□□□□□ -0.62
CDC42BPA-210ENST00000462553 PNPLA7Q6ZV29 1317 aa11.17□□□□□ -0.62
CDC42BPA-210ENST00000462553 FBLN1P23142 703 aa11.17□□□□□ -0.62
CDC42BPA-210ENST00000462553 ZNF784Q8NCA9 323 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPA-210ENST00000462553 ARXQ96QS3 562 aa11.17□□□□□ -0.62
CDC42BPA-210ENST00000462553 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
CDC42BPA-210ENST00000462553 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-210ENST00000462553 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-210ENST00000462553 UBR3Q6ZT12 1888 aa11.16□□□□□ -0.62
CDC42BPA-210ENST00000462553 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-210ENST00000462553 SLC27A3Q5K4L6 730 aa11.15□□□□□ -0.62
CDC42BPA-210ENST00000462553 CCER1Q8TC90 406 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-210ENST00000462553 DDX54Q8TDD1 881 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-210ENST00000462553 TIMELESSQ9UNS1 1208 aa11.15□□□□□ -0.62
CDC42BPA-210ENST00000462553 KCNQ4P56696 695 aa11.14□□□□□ -0.63
CDC42BPA-210ENST00000462553 COG3Q96JB2 828 aa11.14□□□□□ -0.63
CDC42BPA-210ENST00000462553 USP47Q96K76 1375 aa11.14□□□□□ -0.63
CDC42BPA-210ENST00000462553 C4BP0C0L5 1744 aa11.13□□□□□ -0.63
CDC42BPA-210ENST00000462553 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
CDC42BPA-210ENST00000462553 NCAPD2Q15021 1401 aa11.12□□□□□ -0.63
CDC42BPA-210ENST00000462553 RRS1Q15050 365 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-210ENST00000462553 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
CDC42BPA-210ENST00000462553 SLC16A10Q8TF71 515 aa11.12□□□□□ -0.63
CDC42BPA-210ENST00000462553 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
CDC42BPA-210ENST00000462553 FYB1O15117 783 aa11.11□□□□□ -0.63
CDC42BPA-210ENST00000462553 AMPHP49418 695 aa11.11□□□□□ -0.63
CDC42BPA-210ENST00000462553 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
CDC42BPA-210ENST00000462553 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-210ENST00000462553 SYTL4Q96C24 671 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-210ENST00000462553 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-210ENST00000462553 NLGN2Q8NFZ4 835 aa11.1□□□□□ -0.63
CDC42BPA-210ENST00000462553 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
CDC42BPA-210ENST00000462553 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
CDC42BPA-210ENST00000462553 INSRP06213 1382 aa11.1□□□□□ -0.63
CDC42BPA-210ENST00000462553 FLT4P35916 1363 aa11.1□□□□□ -0.63
CDC42BPA-210ENST00000462553 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
CDC42BPA-210ENST00000462553 KIF24Q5T7B8 1368 aa11.09□□□□□ -0.63
CDC42BPA-210ENST00000462553 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-210ENST00000462553 POLD1P28340 1107 aa11.08□□□□□ -0.64
CDC42BPA-210ENST00000462553 HSP90AB2PQ58FF8 381 aa11.08□□□□□ -0.64
CDC42BPA-210ENST00000462553 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 GPR162Q16538 588 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 COL23A1Q86Y22 540 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 KIF13BQ9NQT8 1826 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
CDC42BPA-210ENST00000462553 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 PALLDQ8WX93 1383 aa11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 CYP27B1O15528 508 aa11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 YBX3P16989 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 TMF1P82094 1093 aa11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
CDC42BPA-210ENST00000462553 ZNF831Q5JPB2 1677 aa11.05□□□□□ -0.64
CDC42BPA-210ENST00000462553 AMIGO3Q86WK7 504 aa11.05□□□□□ -0.64
CDC42BPA-210ENST00000462553 CARD14Q9BXL6 1004 aa11.05□□□□□ -0.64
CDC42BPA-210ENST00000462553 EMILIN1Q9Y6C2 1016 aa11.05□□□□□ -0.64
CDC42BPA-210ENST00000462553 TATP17735 454 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-210ENST00000462553 C1QTNF8P60827 252 aa11.04□□□□□ -0.64
CDC42BPA-210ENST00000462553 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
CDC42BPA-210ENST00000462553 BRCA1P38398 1863 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-210ENST00000462553 C4AP0C0L4 1744 aa11.04□□□□□ -0.64
CDC42BPA-210ENST00000462553 CICQ96RK0 1608 aaPredicted RBP11.03□□□□□ -0.64
CDC42BPA-210ENST00000462553 VIRMAQ69YN4 1812 aaKnown RBP11.03□□□□□ -0.64
CDC42BPA-210ENST00000462553 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
CDC42BPA-210ENST00000462553 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms