RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 USP54Q70EL1 1684 aa21.9■■□□□ 1.1
APP-211ENST00000462267 HMGB2P26583 209 aaKnown RBP21.89■■□□□ 1.09
APP-211ENST00000462267 LTN1O94822 1766 aa21.89■■□□□ 1.09
APP-211ENST00000462267 MON2Q7Z3U7 1717 aa21.88■■□□□ 1.09
APP-211ENST00000462267 APLP1P51693 650 aa21.87■■□□□ 1.09
APP-211ENST00000462267 FLAD1Q8NFF5 587 aa21.87■■□□□ 1.09
APP-211ENST00000462267 IP6K1Q92551 441 aa21.87■■□□□ 1.09
APP-211ENST00000462267 USP47Q96K76 1375 aa21.87■■□□□ 1.09
APP-211ENST00000462267 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
APP-211ENST00000462267 KIF3CO14782 793 aa21.85■■□□□ 1.09
APP-211ENST00000462267 ZCRB1Q8TBF4 217 aaKnown RBP21.84■■□□□ 1.09
APP-211ENST00000462267 DOT1LQ8TEK3 1739 aa21.83■■□□□ 1.09
APP-211ENST00000462267 LTV1Q96GA3 475 aaPredicted RBP21.83■■□□□ 1.09
APP-211ENST00000462267 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
APP-211ENST00000462267 HDGFL2Q7Z4V5 671 aaPredicted RBP21.81■■□□□ 1.08
APP-211ENST00000462267 DNAJC5GQ8N7S2 189 aa21.81■■□□□ 1.08
APP-211ENST00000462267 CD163L1Q9NR16 1453 aa21.81■■□□□ 1.08
APP-211ENST00000462267 IGSF1Q8N6C5 1336 aa21.8■■□□□ 1.08
APP-211ENST00000462267 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
APP-211ENST00000462267 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
APP-211ENST00000462267 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
APP-211ENST00000462267 TOMM70O94826 608 aa21.77■■□□□ 1.08
APP-211ENST00000462267 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
APP-211ENST00000462267 CGNL1Q0VF96 1302 aa21.76■■□□□ 1.07
APP-211ENST00000462267 TERF2IPQ9NYB0 399 aa21.75■■□□□ 1.07
APP-211ENST00000462267 C5P01031 1676 aa21.75■■□□□ 1.07
APP-211ENST00000462267 MEGF6O75095 1541 aa21.75■■□□□ 1.07
APP-211ENST00000462267 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
APP-211ENST00000462267 HOXC9P31274 260 aa21.73■■□□□ 1.07
APP-211ENST00000462267 WWC3Q9ULE0 1092 aa21.73■■□□□ 1.07
APP-211ENST00000462267 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
APP-211ENST00000462267 AK7Q96M32 723 aa21.72■■□□□ 1.07
APP-211ENST00000462267 MAP3K19Q56UN5 1328 aa21.72■■□□□ 1.07
APP-211ENST00000462267 AMPHP49418 695 aa21.71■■□□□ 1.07
APP-211ENST00000462267 NSD3Q9BZ95 1437 aa21.71■■□□□ 1.07
APP-211ENST00000462267 A0A1W2PP64 1363 aa21.7■■□□□ 1.06
APP-211ENST00000462267 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
APP-211ENST00000462267 RAPGEF4Q8WZA2 1011 aa21.69■■□□□ 1.06
APP-211ENST00000462267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.68■■□□□ 1.06
APP-211ENST00000462267 SMARCC1Q92922 1105 aaPredicted RBP21.68■■□□□ 1.06
APP-211ENST00000462267 COG3Q96JB2 828 aa21.68■■□□□ 1.06
APP-211ENST00000462267 TAF1LQ8IZX4 1826 aa21.68■■□□□ 1.06
APP-211ENST00000462267 NBPF6Q5VWK0 638 aa21.67■■□□□ 1.06
APP-211ENST00000462267 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
APP-211ENST00000462267 AMIGO3Q86WK7 504 aa21.67■■□□□ 1.06
APP-211ENST00000462267 NBPF4Q96M43 638 aa21.67■■□□□ 1.06
APP-211ENST00000462267 C4BP0C0L5 1744 aa21.66■■□□□ 1.06
APP-211ENST00000462267 PCDH11XQ9BZA7 1347 aa21.66■■□□□ 1.06
APP-211ENST00000462267 PCDH11YQ9BZA8 1340 aa21.66■■□□□ 1.06
APP-211ENST00000462267 PHF14O94880 888 aa21.66■■□□□ 1.06
APP-211ENST00000462267 SSFA2P28290 1259 aa21.66■■□□□ 1.06
APP-211ENST00000462267 COL13A1Q5TAT6 717 aaPredicted RBP21.66■■□□□ 1.06
APP-211ENST00000462267 TATP17735 454 aaPredicted RBP21.65■■□□□ 1.06
APP-211ENST00000462267 JMYQ8N9B5 988 aa21.65■■□□□ 1.06
APP-211ENST00000462267 KLRG1Q96E93 195 aa21.65■■□□□ 1.06
APP-211ENST00000462267 PUS7Q96PZ0 661 aaKnown RBP21.65■■□□□ 1.06
APP-211ENST00000462267 RGPD2P0DJD1 1756 aa21.64■■□□□ 1.06
APP-211ENST00000462267 RTL1A6NKG5 1358 aa21.64■■□□□ 1.06
APP-211ENST00000462267 RBM46Q8TBY0 533 aaKnown RBP21.64■■□□□ 1.05
APP-211ENST00000462267 FBLN1P23142 703 aa21.63■■□□□ 1.05
APP-211ENST00000462267 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
APP-211ENST00000462267 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
APP-211ENST00000462267 USHBP1Q8N6Y0 703 aa21.62■■□□□ 1.05
APP-211ENST00000462267 TOGARAM1Q9Y4F4 1720 aa21.62■■□□□ 1.05
APP-211ENST00000462267 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
APP-211ENST00000462267 TGFB2P61812 414 aa21.61■■□□□ 1.05
APP-211ENST00000462267 SMG6Q86US8 1419 aaKnown RBP21.61■■□□□ 1.05
APP-211ENST00000462267 WDR90Q96KV7 1748 aa21.6■■□□□ 1.05
APP-211ENST00000462267 CAPN15O75808 1086 aa21.6■■□□□ 1.05
APP-211ENST00000462267 FSTL1Q12841 308 aa21.6■■□□□ 1.05
APP-211ENST00000462267 BCS1LQ9Y276 419 aa21.6■■□□□ 1.05
APP-211ENST00000462267 PXDNLA1KZ92 1463 aa21.59■■□□□ 1.05
APP-211ENST00000462267 CYP27B1O15528 508 aa21.59■■□□□ 1.05
APP-211ENST00000462267 PRELPP51888 382 aa21.59■■□□□ 1.05
APP-211ENST00000462267 ARHGAP27Q6ZUM4 889 aa21.59■■□□□ 1.05
APP-211ENST00000462267 C16orf71Q8IYS4 520 aaPredicted RBP21.59■■□□□ 1.05
APP-211ENST00000462267 TNS4Q8IZW8 715 aa21.59■■□□□ 1.05
APP-211ENST00000462267 MMP10P09238 476 aa21.58■■□□□ 1.05
APP-211ENST00000462267 CARD11Q9BXL7 1154 aa21.58■■□□□ 1.05
APP-211ENST00000462267 LOC102724428A0A0B4J2F2 783 aa21.57■■□□□ 1.04
APP-211ENST00000462267 SIK1P57059 783 aa21.57■■□□□ 1.04
APP-211ENST00000462267 RRS1Q15050 365 aaKnown RBP21.57■■□□□ 1.04
APP-211ENST00000462267 LINC00116Q8NCU8 138 aa21.57■■□□□ 1.04
APP-211ENST00000462267 PIGBQ92521 554 aa21.57■■□□□ 1.04
APP-211ENST00000462267 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
APP-211ENST00000462267 HTRA3P83110 453 aa21.56■■□□□ 1.04
APP-211ENST00000462267 A0A0G2JLW4 131 aa21.55■■□□□ 1.04
APP-211ENST00000462267 GNPATO15228 680 aa21.55■■□□□ 1.04
APP-211ENST00000462267 PLEKHG2Q9H7P9 1386 aa21.54■■□□□ 1.04
APP-211ENST00000462267 KIF13BQ9NQT8 1826 aa21.54■■□□□ 1.04
APP-211ENST00000462267 INSRP06213 1382 aa21.53■■□□□ 1.04
APP-211ENST00000462267 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
APP-211ENST00000462267 NLGN1Q8N2Q7 840 aa21.53■■□□□ 1.04
APP-211ENST00000462267 ITGB4P16144 1822 aa21.52■■□□□ 1.04
APP-211ENST00000462267 FCHSD2O94868 740 aa21.52■■□□□ 1.04
APP-211ENST00000462267 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
APP-211ENST00000462267 C9orf131Q5VYM1 1079 aa21.52■■□□□ 1.04
APP-211ENST00000462267 C10orf71Q711Q0 1435 aa21.52■■□□□ 1.04
APP-211ENST00000462267 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.03
APP-211ENST00000462267 MAP2P11137 1827 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms