RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 KCNQ2O43526 872 aa29.38■■■□□ 2.29
TRIM8-202ENST00000462202 PARD3Q8TEW0 1356 aa29.36■■■□□ 2.29
TRIM8-202ENST00000462202 SYTL4Q96C24 671 aaPredicted RBP29.35■■■□□ 2.29
TRIM8-202ENST00000462202 SBF2Q86WG5 1849 aa29.34■■■□□ 2.29
TRIM8-202ENST00000462202 MTHFSP49914 203 aa29.34■■■□□ 2.29
TRIM8-202ENST00000462202 NPC1L1Q9UHC9 1359 aa29.32■■■□□ 2.28
TRIM8-202ENST00000462202 PCDH11XQ9BZA7 1347 aa29.32■■■□□ 2.28
TRIM8-202ENST00000462202 PCDH11YQ9BZA8 1340 aa29.32■■■□□ 2.28
TRIM8-202ENST00000462202 PSDA5PKW4 1024 aaPredicted RBP29.32■■■□□ 2.28
TRIM8-202ENST00000462202 ZEB1P37275 1124 aaPredicted RBP29.32■■■□□ 2.28
TRIM8-202ENST00000462202 SPG7Q9UQ90 795 aa29.3■■■□□ 2.28
TRIM8-202ENST00000462202 PLSCR1O15162 318 aa29.29■■■□□ 2.28
TRIM8-202ENST00000462202 NCAPD2Q15021 1401 aa29.28■■■□□ 2.28
TRIM8-202ENST00000462202 IGSF1Q8N6C5 1336 aa29.28■■■□□ 2.28
TRIM8-202ENST00000462202 PRIM1P49642 420 aaKnown RBP29.28■■■□□ 2.28
TRIM8-202ENST00000462202 R3HDM1Q15032 1099 aaKnown RBP29.28■■■□□ 2.28
TRIM8-202ENST00000462202 NHSQ6T4R5 1651 aa29.28■■■□□ 2.28
TRIM8-202ENST00000462202 KAT6BQ8WYB5 2073 aa29.27■■■□□ 2.28
TRIM8-202ENST00000462202 NBPF14Q5TI25 921 aa29.27■■■□□ 2.28
TRIM8-202ENST00000462202 CYP27B1O15528 508 aa29.24■■■□□ 2.27
TRIM8-202ENST00000462202 IL13P35225 146 aa29.24■■■□□ 2.27
TRIM8-202ENST00000462202 SHANK3Q9BYB0 1731 aa29.24■■■□□ 2.27
TRIM8-202ENST00000462202 SULT6B1Q6IMI4 303 aa29.23■■■□□ 2.27
TRIM8-202ENST00000462202 AEBP1Q8IUX7 1158 aa29.23■■■□□ 2.27
TRIM8-202ENST00000462202 TXNRD1Q16881 649 aa29.22■■■□□ 2.27
TRIM8-202ENST00000462202 DIAPH1O60610 1272 aaKnown RBP29.21■■■□□ 2.27
TRIM8-202ENST00000462202 RREB1Q92766 1687 aa29.21■■■□□ 2.27
TRIM8-202ENST00000462202 DOT1LQ8TEK3 1739 aa29.2■■■□□ 2.27
TRIM8-202ENST00000462202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.2■■■□□ 2.26
TRIM8-202ENST00000462202 PLEKHO1Q53GL0 409 aaPredicted RBP29.19■■■□□ 2.26
TRIM8-202ENST00000462202 PROM2Q8N271 834 aa29.19■■■□□ 2.26
TRIM8-202ENST00000462202 NUP188Q5SRE5 1749 aa29.18■■■□□ 2.26
TRIM8-202ENST00000462202 BTAF1O14981 1849 aa29.17■■■□□ 2.26
TRIM8-202ENST00000462202 PKD1L3Q7Z443 1732 aa29.17■■■□□ 2.26
TRIM8-202ENST00000462202 DDX10Q13206 875 aaKnown RBP29.17■■■□□ 2.26
TRIM8-202ENST00000462202 IFNL2Q8IZJ0 200 aa29.17■■■□□ 2.26
TRIM8-202ENST00000462202 CFAP53Q96M91 514 aa29.17■■■□□ 2.26
TRIM8-202ENST00000462202 RGPD3A6NKT7 1758 aaPredicted RBP29.16■■■□□ 2.26
TRIM8-202ENST00000462202 RGPD4Q7Z3J3 1758 aa29.16■■■□□ 2.26
TRIM8-202ENST00000462202 U2SURPO15042 1029 aaKnown RBP29.16■■■□□ 2.26
TRIM8-202ENST00000462202 HMOX1P09601 288 aa29.16■■■□□ 2.26
TRIM8-202ENST00000462202 MPRIPQ6WCQ1 1025 aa29.16■■■□□ 2.26
TRIM8-202ENST00000462202 PHKG2P15735 406 aa29.15■■■□□ 2.26
TRIM8-202ENST00000462202 ZNF530Q6P9A1 599 aaPredicted RBP29.14■■■□□ 2.26
TRIM8-202ENST00000462202 PPP2R1AP30153 589 aa29.13■■■□□ 2.25
TRIM8-202ENST00000462202 AMOTQ4VCS5 1084 aa29.13■■■□□ 2.25
TRIM8-202ENST00000462202 ANO8Q9HCE9 1232 aaPredicted RBP29.12■■■□□ 2.25
TRIM8-202ENST00000462202 STK32BQ9NY57 414 aa29.12■■■□□ 2.25
TRIM8-202ENST00000462202 C1orf141Q5JVX7 400 aa29.11■■■□□ 2.25
TRIM8-202ENST00000462202 NKX1-1Q15270 411 aaPredicted RBP29.1■■■□□ 2.25
TRIM8-202ENST00000462202 KDRP35968 1356 aa29.09■■■□□ 2.25
TRIM8-202ENST00000462202 PLEKHG2Q9H7P9 1386 aa29.09■■■□□ 2.25
TRIM8-202ENST00000462202 TMOD3Q9NYL9 352 aa29.08■■■□□ 2.25
TRIM8-202ENST00000462202 HSP90AB1P08238 724 aaKnown RBP29.07■■■□□ 2.24
TRIM8-202ENST00000462202 KCNQ4P56696 695 aa29.07■■■□□ 2.24
TRIM8-202ENST00000462202 COL3A1P02461 1466 aaPredicted RBP29.06■■■□□ 2.24
TRIM8-202ENST00000462202 SLC27A3Q5K4L6 730 aa29.06■■■□□ 2.24
TRIM8-202ENST00000462202 LRRC4BQ9NT99 713 aa29.05■■■□□ 2.24
TRIM8-202ENST00000462202 CCNL1Q9UK58 526 aaPredicted RBP29.05■■■□□ 2.24
TRIM8-202ENST00000462202 NUDCQ9Y266 331 aa29.05■■■□□ 2.24
TRIM8-202ENST00000462202 PIGBQ92521 554 aa29.04■■■□□ 2.24
TRIM8-202ENST00000462202 SRCAPQ6ZRS2 3230 aa29.04■■■□□ 2.24
TRIM8-202ENST00000462202 TOGARAM1Q9Y4F4 1720 aa29.03■■■□□ 2.24
TRIM8-202ENST00000462202 SLC15A2Q16348 729 aa29.03■■■□□ 2.24
TRIM8-202ENST00000462202 DCAF5Q96JK2 942 aa29.03■■■□□ 2.24
TRIM8-202ENST00000462202 PALLDQ8WX93 1383 aa29.02■■■□□ 2.24
TRIM8-202ENST00000462202 SMARCC1Q92922 1105 aaPredicted RBP29.01■■■□□ 2.23
TRIM8-202ENST00000462202 U2AF1L5P0DN76 240 aaPredicted RBP28.99■■■□□ 2.23
TRIM8-202ENST00000462202 CABP4P57796 275 aa28.99■■■□□ 2.23
TRIM8-202ENST00000462202 U2AF1Q01081 240 aaKnown RBP eCLIP28.99■■■□□ 2.23
TRIM8-202ENST00000462202 ERVV-2B6SEH9 535 aa28.97■■■□□ 2.23
TRIM8-202ENST00000462202 ZNF827Q17R98 1081 aa28.97■■■□□ 2.23
TRIM8-202ENST00000462202 AKAP4Q5JQC9 854 aa28.97■■■□□ 2.23
TRIM8-202ENST00000462202 MTHFSDQ2M296 383 aaKnown RBP28.96■■■□□ 2.23
TRIM8-202ENST00000462202 ITGB4P16144 1822 aa28.96■■■□□ 2.23
TRIM8-202ENST00000462202 KDM6AO15550 1401 aaPredicted RBP28.95■■■□□ 2.23
TRIM8-202ENST00000462202 RALBP1Q15311 655 aa28.95■■■□□ 2.22
TRIM8-202ENST00000462202 PDGFDQ9GZP0 370 aaPredicted RBP28.95■■■□□ 2.22
TRIM8-202ENST00000462202 ASAP1Q9ULH1 1129 aa28.95■■■□□ 2.22
TRIM8-202ENST00000462202 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
TRIM8-202ENST00000462202 PRKAR2BP31323 418 aa28.93■■■□□ 2.22
TRIM8-202ENST00000462202 LY75O60449 1722 aa28.92■■■□□ 2.22
TRIM8-202ENST00000462202 ZBTB7AO95365 584 aa28.92■■■□□ 2.22
TRIM8-202ENST00000462202 PAPPAQ13219 1627 aa28.91■■■□□ 2.22
TRIM8-202ENST00000462202 AKT1S1Q96B36 256 aa28.91■■■□□ 2.22
TRIM8-202ENST00000462202 SPON1Q9HCB6 807 aa28.91■■■□□ 2.22
TRIM8-202ENST00000462202 ATG3Q9NT62 314 aa28.91■■■□□ 2.22
TRIM8-202ENST00000462202 NFATC2IPQ8NCF5 419 aa28.9■■■□□ 2.22
TRIM8-202ENST00000462202 GAS2L2Q8NHY3 880 aa28.9■■■□□ 2.22
TRIM8-202ENST00000462202 LOC102724428A0A0B4J2F2 783 aa28.89■■■□□ 2.22
TRIM8-202ENST00000462202 SIK1P57059 783 aa28.89■■■□□ 2.22
TRIM8-202ENST00000462202 RBM42Q9BTD8 480 aaKnown RBP28.89■■■□□ 2.22
TRIM8-202ENST00000462202 RSPH6AQ9H0K4 717 aa28.89■■■□□ 2.22
TRIM8-202ENST00000462202 LRP5O75197 1615 aa28.88■■■□□ 2.21
TRIM8-202ENST00000462202 LGR6Q9HBX8 967 aa28.88■■■□□ 2.21
TRIM8-202ENST00000462202 PPP1R1BQ9UD71 204 aaPredicted RBP28.88■■■□□ 2.21
TRIM8-202ENST00000462202 MSH5O43196 834 aa28.87■■■□□ 2.21
TRIM8-202ENST00000462202 HMGB2P26583 209 aaKnown RBP28.87■■■□□ 2.21
TRIM8-202ENST00000462202 ATF5Q9Y2D1 282 aaPredicted RBP28.87■■■□□ 2.21
TRIM8-202ENST00000462202 ZNF316A6NFI3 1004 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms