RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
C9orf3-210ENST00000462125 RGPD2P0DJD1 1756 aa18.16■□□□□ 0.5
C9orf3-210ENST00000462125 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
C9orf3-210ENST00000462125 NHSQ6T4R5 1651 aa18.15■□□□□ 0.5
C9orf3-210ENST00000462125 NSD2O96028 1365 aa18.15■□□□□ 0.5
C9orf3-210ENST00000462125 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-210ENST00000462125 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
C9orf3-210ENST00000462125 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-210ENST00000462125 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
C9orf3-210ENST00000462125 EYA1Q99502 592 aa18.13■□□□□ 0.49
C9orf3-210ENST00000462125 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
C9orf3-210ENST00000462125 MAP2P11137 1827 aaKnown RBP18.12■□□□□ 0.49
C9orf3-210ENST00000462125 ANKRD26Q9UPS8 1709 aa18.12■□□□□ 0.49
C9orf3-210ENST00000462125 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-210ENST00000462125 SLC15A2Q16348 729 aa18.11■□□□□ 0.49
C9orf3-210ENST00000462125 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-210ENST00000462125 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
C9orf3-210ENST00000462125 MORC1Q86VD1 984 aa18.1■□□□□ 0.49
C9orf3-210ENST00000462125 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.49
C9orf3-210ENST00000462125 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
C9orf3-210ENST00000462125 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
C9orf3-210ENST00000462125 CYP27B1O15528 508 aa18.09■□□□□ 0.49
C9orf3-210ENST00000462125 LRRC4BQ9NT99 713 aa18.09■□□□□ 0.49
C9orf3-210ENST00000462125 STK32BQ9NY57 414 aa18.09■□□□□ 0.49
C9orf3-210ENST00000462125 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
C9orf3-210ENST00000462125 SLC27A3Q5K4L6 730 aa18.08■□□□□ 0.48
C9orf3-210ENST00000462125 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-210ENST00000462125 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
C9orf3-210ENST00000462125 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-210ENST00000462125 SPON1Q9HCB6 807 aa18.07■□□□□ 0.48
C9orf3-210ENST00000462125 SPG7Q9UQ90 795 aa18.07■□□□□ 0.48
C9orf3-210ENST00000462125 BTAF1O14981 1849 aa18.07■□□□□ 0.48
C9orf3-210ENST00000462125 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-210ENST00000462125 IGSF1Q8N6C5 1336 aa18.05■□□□□ 0.48
C9orf3-210ENST00000462125 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
C9orf3-210ENST00000462125 AKT1S1Q96B36 256 aa18.03■□□□□ 0.48
C9orf3-210ENST00000462125 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
C9orf3-210ENST00000462125 IFNL2Q8IZJ0 200 aa18.01■□□□□ 0.47
C9orf3-210ENST00000462125 PAPPAQ13219 1627 aa18.01■□□□□ 0.47
C9orf3-210ENST00000462125 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
C9orf3-210ENST00000462125 CASZ1Q86V15 1759 aa18■□□□□ 0.47
C9orf3-210ENST00000462125 PHKG2P15735 406 aa18■□□□□ 0.47
C9orf3-210ENST00000462125 IL13P35225 146 aa18■□□□□ 0.47
C9orf3-210ENST00000462125 MPRIPQ6WCQ1 1025 aa18■□□□□ 0.47
C9orf3-210ENST00000462125 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
C9orf3-210ENST00000462125 PKD1L3Q7Z443 1732 aa18■□□□□ 0.47
C9orf3-210ENST00000462125 ZBTB7AO95365 584 aa17.99■□□□□ 0.47
C9orf3-210ENST00000462125 PTGER2P43116 358 aa17.99■□□□□ 0.47
C9orf3-210ENST00000462125 KCNQ4P56696 695 aa17.99■□□□□ 0.47
C9orf3-210ENST00000462125 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
C9orf3-210ENST00000462125 MTHFSP49914 203 aa17.98■□□□□ 0.47
C9orf3-210ENST00000462125 PIGBQ92521 554 aa17.98■□□□□ 0.47
C9orf3-210ENST00000462125 MTFR1LQ9H019 292 aa17.98■□□□□ 0.47
C9orf3-210ENST00000462125 CCNL1Q9UK58 526 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-210ENST00000462125 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-210ENST00000462125 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
C9orf3-210ENST00000462125 ATF5Q9Y2D1 282 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-210ENST00000462125 LY75O60449 1722 aa17.96■□□□□ 0.47
C9orf3-210ENST00000462125 AMOTQ4VCS5 1084 aa17.96■□□□□ 0.47
C9orf3-210ENST00000462125 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
C9orf3-210ENST00000462125 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
C9orf3-210ENST00000462125 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-210ENST00000462125 PPP1R1BQ9UD71 204 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-210ENST00000462125 AEBP1Q8IUX7 1158 aa17.95■□□□□ 0.46
C9orf3-210ENST00000462125 KDRP35968 1356 aa17.94■□□□□ 0.46
C9orf3-210ENST00000462125 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
C9orf3-210ENST00000462125 TFCP2L1Q9NZI6 479 aa17.94■□□□□ 0.46
C9orf3-210ENST00000462125 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
C9orf3-210ENST00000462125 PALLDQ8WX93 1383 aa17.93■□□□□ 0.46
C9orf3-210ENST00000462125 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
C9orf3-210ENST00000462125 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
C9orf3-210ENST00000462125 TMOD3Q9NYL9 352 aa17.93■□□□□ 0.46
C9orf3-210ENST00000462125 YY1P25490 414 aa17.92■□□□□ 0.46
C9orf3-210ENST00000462125 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
C9orf3-210ENST00000462125 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
C9orf3-210ENST00000462125 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-210ENST00000462125 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
C9orf3-210ENST00000462125 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
C9orf3-210ENST00000462125 ITGB4P16144 1822 aa17.9■□□□□ 0.46
C9orf3-210ENST00000462125 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.45
C9orf3-210ENST00000462125 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
C9orf3-210ENST00000462125 SIK1P57059 783 aa17.89■□□□□ 0.45
C9orf3-210ENST00000462125 COL23A1Q86Y22 540 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-210ENST00000462125 ARXQ96QS3 562 aa17.88■□□□□ 0.45
C9orf3-210ENST00000462125 QSER1Q2KHR3 1735 aa17.88■□□□□ 0.45
C9orf3-210ENST00000462125 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-210ENST00000462125 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
C9orf3-210ENST00000462125 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
C9orf3-210ENST00000462125 SYT17Q9BSW7 474 aa17.86■□□□□ 0.45
C9orf3-210ENST00000462125 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-210ENST00000462125 HMOX1P09601 288 aa17.85■□□□□ 0.45
C9orf3-210ENST00000462125 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
C9orf3-210ENST00000462125 FHDC1Q9C0D6 1143 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-210ENST00000462125 CABP4P57796 275 aa17.84■□□□□ 0.45
C9orf3-210ENST00000462125 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-210ENST00000462125 ATP6V1AP38606 617 aa17.83■□□□□ 0.44
C9orf3-210ENST00000462125 ITPK1Q13572 414 aa17.83■□□□□ 0.44
C9orf3-210ENST00000462125 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.44
C9orf3-210ENST00000462125 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
C9orf3-210ENST00000462125 MAP3K5Q99683 1374 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms